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The map label for this gene is yicC [C]

Identifier: 146340293

GI number: 146340293

Start: 3510362

End: 3511249

Strand: Direct

Name: yicC [C]

Synonym: BRADO3316

Alternate gene names: 146340293

Gene position: 3510362-3511249 (Clockwise)

Preceding gene: 146340292

Following gene: 146340294

Centisome position: 47.08

GC content: 66.33

Gene sequence:

>888_bases
ATGGCGCTGTCGAGCATGACCGGCTTTGCCCGTCACCACGGGGCAAGCGGTCCCTACTCGTTCGAGTGGGAGTTGAAGTC
GGTCAACGCCAAGGGATTGGACGTTCGGGTGCGGCTGCCGCAGGGCTGGGACGAGGTCGAGGCCTTCGCCAAGAAGCGCG
CCACCGAGGTGCTGTCGCGCGGCACCGTCTACGCCAATCTCACCGTCAAGCGCACGGAGACGGGATCCACGGTCCGCATC
AACGAGGATGTGCTGGCGGCGGTGGTCAAGGTGGCGAGCTCGCTGTCGGGCCGGATCGACGCCGTCGCGCCGAGCATCGA
CGGCCTCCTGTCCATCAAGGGCGTGATCGACGTGGCCGAGCCAGAGGCCGACGAGGCCGAGGACAAGGCTGCCAAGGAGG
CGGCCATCGCGGGGTTCGAGACCGCGTTGAAGAACCTCGTCGAGATGCGCCGCCGTGAAGGCGATTCGCTCGGCCAGATT
CTCAACCAGCGCGTCGATGAGATCGAGGCGCTGGCCAAGCGGGCCGAGGCGTCGCCGGGCCGCAAGCCCGAAGCCATCAA
GGCGCGGCTCGCCGAGCAGGTCGCGGCTTTGCTGGAAACGTCCGATCGGTTCGATCCCGATCGCCTGGCGCAGGAGGCGC
TGCTCATCGCGGCCAAGGCCGATGTCCGCGAGGAGCTCGATCGCATCGCCTCGCACATCGCGCAGGCGCGCGAAATGCTG
GGGAAGGGCGGGCCGGTCGGCCGCCGGCTCGATTTTCTCGCCCAGGAATTTCACCGCGAGGTCAACACCACGTGCTCGAA
GTCGAACGACATCGAGCTGACGAATATCGGTCTCGAGCTGAAGACCGTGGTCGAGCAGTTTCGCGAACAGGTTCAGAATC
TGGAGTGA

Upstream 100 bases:

>100_bases
AGAACCGGGCTTAACATTTGGCCAAAAGGCCGTAAGGTTCGCGCACTTTTGCTCGGGCGAGTCTGCCGCCCGTTCCCGAT
CTGCCGGAGATATTGCTGAA

Downstream 100 bases:

>100_bases
TCCATGGCGGCTCACGACGGAAGTTTCGATGGCGTCGAGCGGCGCGGCCTGATGTTCGTGCTCTCGTCGCCGTCGGGCGC
GGGCAAGACGACGCTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MALSSMTGFARHHGASGPYSFEWELKSVNAKGLDVRVRLPQGWDEVEAFAKKRATEVLSRGTVYANLTVKRTETGSTVRI
NEDVLAAVVKVASSLSGRIDAVAPSIDGLLSIKGVIDVAEPEADEAEDKAAKEAAIAGFETALKNLVEMRRREGDSLGQI
LNQRVDEIEALAKRAEASPGRKPEAIKARLAEQVAALLETSDRFDPDRLAQEALLIAAKADVREELDRIASHIAQAREML
GKGGPVGRRLDFLAQEFHREVNTTCSKSNDIELTNIGLELKTVVEQFREQVQNLE

Sequences:

>Translated_295_residues
MALSSMTGFARHHGASGPYSFEWELKSVNAKGLDVRVRLPQGWDEVEAFAKKRATEVLSRGTVYANLTVKRTETGSTVRI
NEDVLAAVVKVASSLSGRIDAVAPSIDGLLSIKGVIDVAEPEADEAEDKAAKEAAIAGFETALKNLVEMRRREGDSLGQI
LNQRVDEIEALAKRAEASPGRKPEAIKARLAEQVAALLETSDRFDPDRLAQEALLIAAKADVREELDRIASHIAQAREML
GKGGPVGRRLDFLAQEFHREVNTTCSKSNDIELTNIGLELKTVVEQFREQVQNLE
>Mature_294_residues
ALSSMTGFARHHGASGPYSFEWELKSVNAKGLDVRVRLPQGWDEVEAFAKKRATEVLSRGTVYANLTVKRTETGSTVRIN
EDVLAAVVKVASSLSGRIDAVAPSIDGLLSIKGVIDVAEPEADEAEDKAAKEAAIAGFETALKNLVEMRRREGDSLGQIL
NQRVDEIEALAKRAEASPGRKPEAIKARLAEQVAALLETSDRFDPDRLAQEALLIAAKADVREELDRIASHIAQAREMLG
KGGPVGRRLDFLAQEFHREVNTTCSKSNDIELTNIGLELKTVVEQFREQVQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=297, Percent_Identity=32.3232323232323, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32226; Mature: 32095

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSSMTGFARHHGASGPYSFEWELKSVNAKGLDVRVRLPQGWDEVEAFAKKRATEVLSR
CCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC
GTVYANLTVKRTETGSTVRINEDVLAAVVKVASSLSGRIDAVAPSIDGLLSIKGVIDVAE
CCEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCC
PEADEAEDKAAKEAAIAGFETALKNLVEMRRREGDSLGQILNQRVDEIEALAKRAEASPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
RKPEAIKARLAEQVAALLETSDRFDPDRLAQEALLIAAKADVREELDRIASHIAQAREML
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKGGPVGRRLDFLAQEFHREVNTTCSKSNDIELTNIGLELKTVVEQFREQVQNLE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALSSMTGFARHHGASGPYSFEWELKSVNAKGLDVRVRLPQGWDEVEAFAKKRATEVLSR
CCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC
GTVYANLTVKRTETGSTVRINEDVLAAVVKVASSLSGRIDAVAPSIDGLLSIKGVIDVAE
CCEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCC
PEADEAEDKAAKEAAIAGFETALKNLVEMRRREGDSLGQILNQRVDEIEALAKRAEASPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
RKPEAIKARLAEQVAALLETSDRFDPDRLAQEALLIAAKADVREELDRIASHIAQAREML
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKGGPVGRRLDFLAQEFHREVNTTCSKSNDIELTNIGLELKTVVEQFREQVQNLE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]