| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yceG [C]
Identifier: 146340292
GI number: 146340292
Start: 3509021
End: 3510238
Strand: Direct
Name: yceG [C]
Synonym: BRADO3315
Alternate gene names: 146340292
Gene position: 3509021-3510238 (Clockwise)
Preceding gene: 146340291
Following gene: 146340293
Centisome position: 47.06
GC content: 67.65
Gene sequence:
>1218_bases GTGCCTCCGCCGCCGCGCCGCTCTGATCGGGCGCGCAATCCCTTCGTGGTGGTCGGCAATGCGATCATCACCTTGCTCAT CCTGGCGATGATCGGCGCCGGCGCGGCGTACTACTATGGCCGCCAGATCCTGGAGGCGCCCGGACCGCTGCAGGACGACA AGATCGTCAACATCCCGCAACGCGCCGGCAAGCGCGACATCGCCGATGTGCTCGCGCGCGAGGGCGTCATCGACGTCAAT CCGTGGATCTTCATCGGCGGCGTCTACGCGTTGAAGGCCAGTTCCGATCTGAAGCCGGGCGAGTATGCGTTCCAGAAGAA TGCGTCGCTGCGCGACGTGATCGGCGTGATCGTCGAAGGCAAGGTCGTGCAGCATGGCGTCACGATCCCCGAAGGCCTCA CCTCCGAGCAGATCGTCGCGCGTCTGTCCGACAACGACATCTTCACCGGCAGCGTGCGCGAGATTCCGCGCGAGGGCACG CTGCTGCCGGAGACCTACAAGTTCCCGCGCGGCACCAGCCGCGATCAGGTCATCCAGCGCATGCAGCAGGCGCAGAAGCG CGTGCTCGCCGATATCTGGGAGCGCCGCAGCCCCGATCTGCCGGTGAAGACGCCGGAGCAGTTGGTGACGCTGGCCTCGA TCGTCGAGAAGGAGACCGGCAAGCCCGATGAGCGCAGCCGTGTCGCGGCCGTGTTCGTCAACCGGCTGAAGCAGCGGATC AAGCTGCAGTCGGATCCCACGATCATCTACGGCCTGGTCGGCGGCAAGGGGACGCTGGGGCGGCCGATCAAGCGCAGCGA GATCACGCAGCCCTCGCCCTACAACACCTATGTCATCGAGGGGCTGCCGCCGGGCCCGATCTCCAATCCCGGCCGCGCCT CGCTGGAGGCGACGGCGAATCCGGCGCGCACGCGCGACCTCTATTTCGTTGCCGATGGTACCGGTGGCCATGCGTTCACC GAGACCTACGACCTGCACCAGAAGAACGTCGCCAAGCTGCGGGCGATGGAACGGCAGACTCAGAACGACACCGTGGAGCC CGAGGAGGCGCCGCCGGCGGTGGCTGGCGGTGCGGTTGATTCGGCTGCTCCCGCGACACCGCCGCGGCCGCCTGTCGGGG CCAAGAAGCCGCCTGCGCCCCGTGCCACCGGAGCGGCCCCGGCCAATGGCCCACGTCAGGGCGCGGCACAACCGACACCG CCGGTCGTTCAGCAATAA
Upstream 100 bases:
>100_bases CACGGCCACGACGAGAGCGACAGGACTGAAGGTTGCATCGATGAGTGAACGGCCGCCCATCTCGCCCCGTAGTCCGCGCG CAGCGCTGGAGCCCGAACGT
Downstream 100 bases:
>100_bases TTTTCCACGCAGACCGGCCGCGCAGAACCGGGCTTAACATTTGGCCAAAAGGCCGTAAGGTTCGCGCACTTTTGCTCGGG CGAGTCTGCCGCCCGTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MPPPPRRSDRARNPFVVVGNAIITLLILAMIGAGAAYYYGRQILEAPGPLQDDKIVNIPQRAGKRDIADVLAREGVIDVN PWIFIGGVYALKASSDLKPGEYAFQKNASLRDVIGVIVEGKVVQHGVTIPEGLTSEQIVARLSDNDIFTGSVREIPREGT LLPETYKFPRGTSRDQVIQRMQQAQKRVLADIWERRSPDLPVKTPEQLVTLASIVEKETGKPDERSRVAAVFVNRLKQRI KLQSDPTIIYGLVGGKGTLGRPIKRSEITQPSPYNTYVIEGLPPGPISNPGRASLEATANPARTRDLYFVADGTGGHAFT ETYDLHQKNVAKLRAMERQTQNDTVEPEEAPPAVAGGAVDSAAPATPPRPPVGAKKPPAPRATGAAPANGPRQGAAQPTP PVVQQ
Sequences:
>Translated_405_residues MPPPPRRSDRARNPFVVVGNAIITLLILAMIGAGAAYYYGRQILEAPGPLQDDKIVNIPQRAGKRDIADVLAREGVIDVN PWIFIGGVYALKASSDLKPGEYAFQKNASLRDVIGVIVEGKVVQHGVTIPEGLTSEQIVARLSDNDIFTGSVREIPREGT LLPETYKFPRGTSRDQVIQRMQQAQKRVLADIWERRSPDLPVKTPEQLVTLASIVEKETGKPDERSRVAAVFVNRLKQRI KLQSDPTIIYGLVGGKGTLGRPIKRSEITQPSPYNTYVIEGLPPGPISNPGRASLEATANPARTRDLYFVADGTGGHAFT ETYDLHQKNVAKLRAMERQTQNDTVEPEEAPPAVAGGAVDSAAPATPPRPPVGAKKPPAPRATGAAPANGPRQGAAQPTP PVVQQ >Mature_404_residues PPPPRRSDRARNPFVVVGNAIITLLILAMIGAGAAYYYGRQILEAPGPLQDDKIVNIPQRAGKRDIADVLAREGVIDVNP WIFIGGVYALKASSDLKPGEYAFQKNASLRDVIGVIVEGKVVQHGVTIPEGLTSEQIVARLSDNDIFTGSVREIPREGTL LPETYKFPRGTSRDQVIQRMQQAQKRVLADIWERRSPDLPVKTPEQLVTLASIVEKETGKPDERSRVAAVFVNRLKQRIK LQSDPTIIYGLVGGKGTLGRPIKRSEITQPSPYNTYVIEGLPPGPISNPGRASLEATANPARTRDLYFVADGTGGHAFTE TYDLHQKNVAKLRAMERQTQNDTVEPEEAPPAVAGGAVDSAAPATPPRPPVGAKKPPAPRATGAAPANGPRQGAAQPTPP VVQQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=325, Percent_Identity=32.6153846153846, Blast_Score=170, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 43681; Mature: 43550
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPPRRSDRARNPFVVVGNAIITLLILAMIGAGAAYYYGRQILEAPGPLQDDKIVNIPQ CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCHH RAGKRDIADVLAREGVIDVNPWIFIGGVYALKASSDLKPGEYAFQKNASLRDVIGVIVEG HCCHHHHHHHHHHCCEEECCCEEEECCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHCC KVVQHGVTIPEGLTSEQIVARLSDNDIFTGSVREIPREGTLLPETYKFPRGTSRDQVIQR EEHCCCCCCCCCCCHHHHHHHHCCCCEEECHHHHCCCCCCCCCHHCCCCCCCCHHHHHHH MQQAQKRVLADIWERRSPDLPVKTPEQLVTLASIVEKETGKPDERSRVAAVFVNRLKQRI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KLQSDPTIIYGLVGGKGTLGRPIKRSEITQPSPYNTYVIEGLPPGPISNPGRASLEATAN CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCC PARTRDLYFVADGTGGHAFTETYDLHQKNVAKLRAMERQTQNDTVEPEEAPPAVAGGAVD CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SAAPATPPRPPVGAKKPPAPRATGAAPANGPRQGAAQPTPPVVQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PPPPRRSDRARNPFVVVGNAIITLLILAMIGAGAAYYYGRQILEAPGPLQDDKIVNIPQ CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCHH RAGKRDIADVLAREGVIDVNPWIFIGGVYALKASSDLKPGEYAFQKNASLRDVIGVIVEG HCCHHHHHHHHHHCCEEECCCEEEECCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHCC KVVQHGVTIPEGLTSEQIVARLSDNDIFTGSVREIPREGTLLPETYKFPRGTSRDQVIQR EEHCCCCCCCCCCCHHHHHHHHCCCCEEECHHHHCCCCCCCCCHHCCCCCCCCHHHHHHH MQQAQKRVLADIWERRSPDLPVKTPEQLVTLASIVEKETGKPDERSRVAAVFVNRLKQRI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KLQSDPTIIYGLVGGKGTLGRPIKRSEITQPSPYNTYVIEGLPPGPISNPGRASLEATAN CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCC PARTRDLYFVADGTGGHAFTETYDLHQKNVAKLRAMERQTQNDTVEPEEAPPAVAGGAVD CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SAAPATPPRPPVGAKKPPAPRATGAAPANGPRQGAAQPTPPVVQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]