Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146339968

Identifier: 146339968

GI number: 146339968

Start: 3175614

End: 3176876

Strand: Direct

Name: 146339968

Synonym: BRADO2973

Alternate gene names: NA

Gene position: 3175614-3176876 (Clockwise)

Preceding gene: 146339966

Following gene: 146339969

Centisome position: 42.59

GC content: 67.93

Gene sequence:

>1263_bases
ATGCTGCCGAGGCAAGCCGCGCCGGCGAAGCCGGCGGCAGATGCCGCGCCGGCGAAGAAGCCTGCGGCCTCGCCCCGGAT
TGCCGACAATTCGGCGCCGATCTCATTCGCGCTCGTCAAAGGCGGGCCTGATTCCTGCGGTCCGGGCTGCGACACCTGGA
TCGCGGCGGAAGGCAAGATCGATGGCAGCGCGCTGGCGCGGCTGCGCAAGTTCATGAAGCAGATCGGCGAGCGCAAGCTG
CCGATCTACTTCAACTCGCCCGGCGGCAATGTCGAGCAGGCGCTCGCGATGGGCAACTGGCTCCGCGAGAAGAAGGCCTC
CGTTCGCGTGGGAAGGACCACCGCGCGCGAATGCGGCTTCGAGCCGCAGGAGGGCGAGGTCTGCACCAAGCTGAAGCTGT
CCGGCCGCGAGCTGCATGGCGAGGTCTGGACCCGCGGGTCGATGTGCAACTCGGCCTGCCCCTATATCATCCTCGGCGCG
CCCAGCCGCGAGCTCGCTCCGGACGTGACGCTCGCGGTGCATTCGCCGCGCGTGATCCTGAACTTCACCGGCGGCGTGCC
GACGCACGAGATGCGCGTGCAGGCGCTGCAGCGGGCGATGGAGCGGGCCGACAAGATGGTGCTCGACTACATCAACAAGC
TCGGCGCCGATCCAGGCCTCTTGACGGCGGCGCGCTCGGTGCCGTTCGAGAGCATGCGCATCCTGACGCGGGAGGAGATC
GTGCGCTTCGCGCTCGACAAGCGCGAGCGGGTCGAGAGTCCCTGGATGTTCGAGGCGGCCGCCCGCGGCATCGCCTACAA
GACCATCCTGTCGCGCAACGGCGGCGAATCCACGTTCCGCACCACGCGCTTCCAGCTCGTCTGCTTCCACCAGGACCGCT
TCGAGCTCGATGTCGAGCGCAACGCGGGACCGGCCGGTGGTGTCGGGATTCTGTCGATCGCCAGCGGCGACCTCAGGCTC
AACTTCCTGTCGCCGCCGCGCCGGTCGGGCGAGCGCGAGACGTGGGGGGTGTTTCTCAACGGCAGTCAGATGAAGACGCT
GGCATCATCCGCCGCTGTCGAGTTGAGCGATGCGTCGTTGAGCGGGGCGCGTCTGGGCGGATCGGGTTTTCCGGTCGGGG
GCGATGGACTGCAGAACGTCGTGAAGAAGCTGACGGACAGCTGTCCGCCGTCGAAGGCCGTGACTTATCCTTCTCCTTCG
GGCACGCCCGTGCCGTGGATGCAAGCGCCGTCACCACAAGCGTCGGCCCAGCCCGTACGCTGA

Upstream 100 bases:

>100_bases
GGCCGTGCCGCCGACAACCCAGCCCTCGTCAACCAAGCCGCTGGCGAGCAAGCCATTGATCGGCAAGCCGGCGATCCCGG
TCAGGCCGGCCGCACCGGCG

Downstream 100 bases:

>100_bases
CGGGACGAAAGAATATCATGTGCGGCATGAGGAATTTTCATGCAGGTGCATGAAAATCCCTGCTATTGAACGGTCATGAC
ATCCGCTTCGACCATGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MLPRQAAPAKPAADAAPAKKPAASPRIADNSAPISFALVKGGPDSCGPGCDTWIAAEGKIDGSALARLRKFMKQIGERKL
PIYFNSPGGNVEQALAMGNWLREKKASVRVGRTTARECGFEPQEGEVCTKLKLSGRELHGEVWTRGSMCNSACPYIILGA
PSRELAPDVTLAVHSPRVILNFTGGVPTHEMRVQALQRAMERADKMVLDYINKLGADPGLLTAARSVPFESMRILTREEI
VRFALDKRERVESPWMFEAAARGIAYKTILSRNGGESTFRTTRFQLVCFHQDRFELDVERNAGPAGGVGILSIASGDLRL
NFLSPPRRSGERETWGVFLNGSQMKTLASSAAVELSDASLSGARLGGSGFPVGGDGLQNVVKKLTDSCPPSKAVTYPSPS
GTPVPWMQAPSPQASAQPVR

Sequences:

>Translated_420_residues
MLPRQAAPAKPAADAAPAKKPAASPRIADNSAPISFALVKGGPDSCGPGCDTWIAAEGKIDGSALARLRKFMKQIGERKL
PIYFNSPGGNVEQALAMGNWLREKKASVRVGRTTARECGFEPQEGEVCTKLKLSGRELHGEVWTRGSMCNSACPYIILGA
PSRELAPDVTLAVHSPRVILNFTGGVPTHEMRVQALQRAMERADKMVLDYINKLGADPGLLTAARSVPFESMRILTREEI
VRFALDKRERVESPWMFEAAARGIAYKTILSRNGGESTFRTTRFQLVCFHQDRFELDVERNAGPAGGVGILSIASGDLRL
NFLSPPRRSGERETWGVFLNGSQMKTLASSAAVELSDASLSGARLGGSGFPVGGDGLQNVVKKLTDSCPPSKAVTYPSPS
GTPVPWMQAPSPQASAQPVR
>Mature_420_residues
MLPRQAAPAKPAADAAPAKKPAASPRIADNSAPISFALVKGGPDSCGPGCDTWIAAEGKIDGSALARLRKFMKQIGERKL
PIYFNSPGGNVEQALAMGNWLREKKASVRVGRTTARECGFEPQEGEVCTKLKLSGRELHGEVWTRGSMCNSACPYIILGA
PSRELAPDVTLAVHSPRVILNFTGGVPTHEMRVQALQRAMERADKMVLDYINKLGADPGLLTAARSVPFESMRILTREEI
VRFALDKRERVESPWMFEAAARGIAYKTILSRNGGESTFRTTRFQLVCFHQDRFELDVERNAGPAGGVGILSIASGDLRL
NFLSPPRRSGERETWGVFLNGSQMKTLASSAAVELSDASLSGARLGGSGFPVGGDGLQNVVKKLTDSCPPSKAVTYPSPS
GTPVPWMQAPSPQASAQPVR

Specific function: Unknown

COG id: COG3904

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45083; Mature: 45083

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPRQAAPAKPAADAAPAKKPAASPRIADNSAPISFALVKGGPDSCGPGCDTWIAAEGKI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCC
DGSALARLRKFMKQIGERKLPIYFNSPGGNVEQALAMGNWLREKKASVRVGRTTARECGF
CHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHCCC
EPQEGEVCTKLKLSGRELHGEVWTRGSMCNSACPYIILGAPSRELAPDVTLAVHSPRVIL
CCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCEEEE
NFTGGVPTHEMRVQALQRAMERADKMVLDYINKLGADPGLLTAARSVPFESMRILTREEI
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHH
VRFALDKRERVESPWMFEAAARGIAYKTILSRNGGESTFRTTRFQLVCFHQDRFELDVER
HHHHHHHHHHCCCCCHHHHHHCCHHEEHHHHCCCCCCCEEEEEEEEEEEECCCEEEEEEC
NAGPAGGVGILSIASGDLRLNFLSPPRRSGERETWGVFLNGSQMKTLASSAAVELSDASL
CCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCC
SGARLGGSGFPVGGDGLQNVVKKLTDSCPPSKAVTYPSPSGTPVPWMQAPSPQASAQPVR
CCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPRQAAPAKPAADAAPAKKPAASPRIADNSAPISFALVKGGPDSCGPGCDTWIAAEGKI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCC
DGSALARLRKFMKQIGERKLPIYFNSPGGNVEQALAMGNWLREKKASVRVGRTTARECGF
CHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHCCC
EPQEGEVCTKLKLSGRELHGEVWTRGSMCNSACPYIILGAPSRELAPDVTLAVHSPRVIL
CCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCEEEE
NFTGGVPTHEMRVQALQRAMERADKMVLDYINKLGADPGLLTAARSVPFESMRILTREEI
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHH
VRFALDKRERVESPWMFEAAARGIAYKTILSRNGGESTFRTTRFQLVCFHQDRFELDVER
HHHHHHHHHHCCCCCHHHHHHCCHHEEHHHHCCCCCCCEEEEEEEEEEEECCCEEEEEEC
NAGPAGGVGILSIASGDLRLNFLSPPRRSGERETWGVFLNGSQMKTLASSAAVELSDASL
CCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCC
SGARLGGSGFPVGGDGLQNVVKKLTDSCPPSKAVTYPSPSGTPVPWMQAPSPQASAQPVR
CCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA