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The map label for this gene is yrdA [C]

Identifier: 146339940

GI number: 146339940

Start: 3148927

End: 3149457

Strand: Direct

Name: yrdA [C]

Synonym: BRADO2944

Alternate gene names: 146339940

Gene position: 3148927-3149457 (Clockwise)

Preceding gene: 146339939

Following gene: 146339943

Centisome position: 42.23

GC content: 63.47

Gene sequence:

>531_bases
ATGGCCATCTACGAACTCGACGGGCAGGCGCCCGAGCTGCCGACGGACGGTAACTACTACATCGCCGAGAATGCCACCGT
GATCGGTCGCGTGAAGCTCGCGAAGGAGGTCACTGTCTGGTTCGGCGCGGTCATTCGCGGCGACAATGACTGGATCGAGA
TCGGCGAGAGCTCGAATATCCAGGACAACGCGACCTGTCATGTCGATCCCGGCTTTCCGCTGCGCGTCGGCCGCAACGTC
ACGGTCGGGCACAACGTCATCCTGCATGGTTGCACGGTCGAGGACGACGCGCTGATCGGCATGGGTTCGATCATCATGAA
CGGCGCCCATATCCGCCGCGGCAGCGTCGTCGGCGCCGGCGCCATCATCACCGAGGGCAAGGACTTTCCGGAATATTCGC
TGATCATCGGCGCTCCCGCGCGCGTCGTGCGCACACTGGAGCCTTCGCAGGTCGAGCGCATGGGCATCGCAGCCAAGGCC
TATGTCGCCAAGGGGCCGCGCTACACCAAGGGATTGAAGAAGATCGGCTGA

Upstream 100 bases:

>100_bases
CGTGCTGGCCTGAGTTCCTCATCGCGGCCCGCCGAACGGCGCGGTTGCTTGAACTCGCGGCTCCGGCTGTGCCAAGGTCT
CTCGCGAATGGGAGACCTTG

Downstream 100 bases:

>100_bases
GGCCCGGGGGGGCGAGCGCCCAATCACGCGCGGCTCACGTGCCCTCGGACTCACTGGCCTCGCGCGCGGTGGCGATGCGC
TCATGGCCGCTCGCCCAAAG

Product: hexapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MAIYELDGQAPELPTDGNYYIAENATVIGRVKLAKEVTVWFGAVIRGDNDWIEIGESSNIQDNATCHVDPGFPLRVGRNV
TVGHNVILHGCTVEDDALIGMGSIIMNGAHIRRGSVVGAGAIITEGKDFPEYSLIIGAPARVVRTLEPSQVERMGIAAKA
YVAKGPRYTKGLKKIG

Sequences:

>Translated_176_residues
MAIYELDGQAPELPTDGNYYIAENATVIGRVKLAKEVTVWFGAVIRGDNDWIEIGESSNIQDNATCHVDPGFPLRVGRNV
TVGHNVILHGCTVEDDALIGMGSIIMNGAHIRRGSVVGAGAIITEGKDFPEYSLIIGAPARVVRTLEPSQVERMGIAAKA
YVAKGPRYTKGLKKIG
>Mature_175_residues
AIYELDGQAPELPTDGNYYIAENATVIGRVKLAKEVTVWFGAVIRGDNDWIEIGESSNIQDNATCHVDPGFPLRVGRNVT
VGHNVILHGCTVEDDALIGMGSIIMNGAHIRRGSVVGAGAIITEGKDFPEYSLIIGAPARVVRTLEPSQVERMGIAAKAY
VAKGPRYTKGLKKIG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=155, Percent_Identity=38.0645161290323, Blast_Score=111, Evalue=2e-26,
Organism=Escherichia coli, GI1787667, Length=154, Percent_Identity=38.3116883116883, Blast_Score=105, Evalue=1e-24,
Organism=Escherichia coli, GI87081681, Length=162, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18845; Mature: 18714

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIYELDGQAPELPTDGNYYIAENATVIGRVKLAKEVTVWFGAVIRGDNDWIEIGESSNI
CEEEECCCCCCCCCCCCCEEEECCCEEEEEEEEHHHEEEEEEEEEECCCCEEEECCCCCC
QDNATCHVDPGFPLRVGRNVTVGHNVILHGCTVEDDALIGMGSIIMNGAHIRRGSVVGAG
CCCCEEEECCCCCEEECCEEEECCEEEEEECEECCCCEEEECHHHCCCCEEECCCEEECC
AIITEGKDFPEYSLIIGAPARVVRTLEPSQVERMGIAAKAYVAKGPRYTKGLKKIG
EEEECCCCCCCEEEEEECHHHHEECCCHHHHHHHCCEEEEEEECCCCHHHHHHHCC
>Mature Secondary Structure 
AIYELDGQAPELPTDGNYYIAENATVIGRVKLAKEVTVWFGAVIRGDNDWIEIGESSNI
EEEECCCCCCCCCCCCCEEEECCCEEEEEEEEHHHEEEEEEEEEECCCCEEEECCCCCC
QDNATCHVDPGFPLRVGRNVTVGHNVILHGCTVEDDALIGMGSIIMNGAHIRRGSVVGAG
CCCCEEEECCCCCEEECCEEEECCEEEEEECEECCCCEEEECHHHCCCCEEECCCEEECC
AIITEGKDFPEYSLIIGAPARVVRTLEPSQVERMGIAAKAYVAKGPRYTKGLKKIG
EEEECCCCCCCEEEEEECHHHHEECCCHHHHHHHCCEEEEEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]