Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146339939

Identifier: 146339939

GI number: 146339939

Start: 3148510

End: 3148839

Strand: Direct

Name: 146339939

Synonym: BRADO2943

Alternate gene names: NA

Gene position: 3148510-3148839 (Clockwise)

Preceding gene: 146339937

Following gene: 146339940

Centisome position: 42.22

GC content: 67.27

Gene sequence:

>330_bases
ATGTCTGCAGAGGCGTTCAATTCCCTGTTCTCTCTCCTGATCGGTTTCGCGCTGGCCGGCGCGCTGGCGAGCGGATACCA
GGCCTATGCCGAGCGTCCGCCCGGCTTCGAGCTGCTGCAGGAGGGCGTCACGCCCCGCCGCTTCGCCGCGGTGCCGTTCC
TGGTGTTTGCCGCTCCCTTCATCATCATGCGCAACACTTTGCGCGGCGCCCGCATCGAGCGCCGCCGCTTCGAGTTCGTC
ATGCTGGCGACGGTGATCGCCGGGTTCTGGAGCATGATGTCCGGCACCTTCGTGGTGATGACGCTGCGCGCCGCGGGCGT
GCTGGCCTGA

Upstream 100 bases:

>100_bases
CGGCCGGAGTTAACCCTTCCTTAAGTATAATGTGGCGCTCGCCGCGGTATTTTGCCAAACCAGCCTCGGGCAGTTCTGCA
TGTTTGAGTGAGTGCGTACG

Downstream 100 bases:

>100_bases
GTTCCTCATCGCGGCCCGCCGAACGGCGCGGTTGCTTGAACTCGCGGCTCCGGCTGTGCCAAGGTCTCTCGCGAATGGGA
GACCTTGATGGCCATCTACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSAEAFNSLFSLLIGFALAGALASGYQAYAERPPGFELLQEGVTPRRFAAVPFLVFAAPFIIMRNTLRGARIERRRFEFV
MLATVIAGFWSMMSGTFVVMTLRAAGVLA

Sequences:

>Translated_109_residues
MSAEAFNSLFSLLIGFALAGALASGYQAYAERPPGFELLQEGVTPRRFAAVPFLVFAAPFIIMRNTLRGARIERRRFEFV
MLATVIAGFWSMMSGTFVVMTLRAAGVLA
>Mature_108_residues
SAEAFNSLFSLLIGFALAGALASGYQAYAERPPGFELLQEGVTPRRFAAVPFLVFAAPFIIMRNTLRGARIERRRFEFVM
LATVIAGFWSMMSGTFVVMTLRAAGVLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11928; Mature: 11797

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEAFNSLFSLLIGFALAGALASGYQAYAERPPGFELLQEGVTPRRFAAVPFLVFAAPF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH
IIMRNTLRGARIERRRFEFVMLATVIAGFWSMMSGTFVVMTLRAAGVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAEAFNSLFSLLIGFALAGALASGYQAYAERPPGFELLQEGVTPRRFAAVPFLVFAAPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH
IIMRNTLRGARIERRRFEFVMLATVIAGFWSMMSGTFVVMTLRAAGVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA