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The map label for this gene is 146339884

Identifier: 146339884

GI number: 146339884

Start: 3087690

End: 3088226

Strand: Direct

Name: 146339884

Synonym: BRADO2886

Alternate gene names: NA

Gene position: 3087690-3088226 (Clockwise)

Preceding gene: 146339883

Following gene: 146339885

Centisome position: 41.41

GC content: 65.74

Gene sequence:

>537_bases
ATGTCAGCCACAAACCCCGCGCTCGTTCTCAACGCCGACTTCCAGCCGCTCAGCTACTTCCCGCTGTCGGTGGTTTGCTG
GGAGGATGCGATCCGGGCCGTGGTCAGCGAGTCTCACGTGGTCGTCGCCGAATACGACCGGATCGTGCGCAGCCCGAGCG
TCACGATGCGGCTGCCGTCGGTGATCGCGTTGCGCGACTATGTCAGGCCGACGATGCGCGTTCCGTTCACGCGCTTCAAC
GTCTTCCTGCGCGATCGCTTCGAATGTCAGTATTGCGGCGGCCGCTATCTCCACGGCGAGCTGACGTTCGACCACGTGGT
GCCGCGCGCCGACGGCGGCGAGACGTCGTGGACCAACATTGTCGCCGCCTGCAGCCCCTGCAACGCGCGCAAGGACCGGC
GCTATCTCGAGCCGCGGCGGCCTCCGTTCGAGCCGACGCGACAGGAGTTGATGGCCGCGCAGCGCCTGTTCCCGCCGCGT
TTCCTGCATGAGACGTGGCAGGACTACTTGTATTGGGATGTGGAGCTGGAGCGGTGA

Upstream 100 bases:

>100_bases
CATTCATGGCGCCGCGATGGACCGCGCGTCAGACGACGTCGGTTGTCCGGTCGCACGTTCTCATCAATGAGCGAGCCGGC
GGCCGGAAAGGAGGTCGACG

Downstream 100 bases:

>100_bases
CGATGATCGCGTAGCCCGGATGAGCCCACGTCGCCGCCGTCAGGCGGCGGCGTGGGCGACATCCGGGTTCTCACGCGCCG
CGTGCGTGAACCCGGATGTC

Product: putative HNH endonuclease:HNH nuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; HNH Nuclease; Hnh Endonuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSATNPALVLNADFQPLSYFPLSVVCWEDAIRAVVSESHVVVAEYDRIVRSPSVTMRLPSVIALRDYVRPTMRVPFTRFN
VFLRDRFECQYCGGRYLHGELTFDHVVPRADGGETSWTNIVAACSPCNARKDRRYLEPRRPPFEPTRQELMAAQRLFPPR
FLHETWQDYLYWDVELER

Sequences:

>Translated_178_residues
MSATNPALVLNADFQPLSYFPLSVVCWEDAIRAVVSESHVVVAEYDRIVRSPSVTMRLPSVIALRDYVRPTMRVPFTRFN
VFLRDRFECQYCGGRYLHGELTFDHVVPRADGGETSWTNIVAACSPCNARKDRRYLEPRRPPFEPTRQELMAAQRLFPPR
FLHETWQDYLYWDVELER
>Mature_177_residues
SATNPALVLNADFQPLSYFPLSVVCWEDAIRAVVSESHVVVAEYDRIVRSPSVTMRLPSVIALRDYVRPTMRVPFTRFNV
FLRDRFECQYCGGRYLHGELTFDHVVPRADGGETSWTNIVAACSPCNARKDRRYLEPRRPPFEPTRQELMAAQRLFPPRF
LHETWQDYLYWDVELER

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20830; Mature: 20699

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATNPALVLNADFQPLSYFPLSVVCWEDAIRAVVSESHVVVAEYDRIVRSPSVTMRLPS
CCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEHHHHHCCCCCEEECCH
VIALRDYVRPTMRVPFTRFNVFLRDRFECQYCGGRYLHGELTFDHVVPRADGGETSWTNI
HHHHHHHCCHHHCCCHHHEEEEECCCCEEEECCCEEEECEEEHHHCCCCCCCCCCCHHHH
VAACSPCNARKDRRYLEPRRPPFEPTRQELMAAQRLFPPRFLHETWQDYLYWDVELER
EEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEECC
>Mature Secondary Structure 
SATNPALVLNADFQPLSYFPLSVVCWEDAIRAVVSESHVVVAEYDRIVRSPSVTMRLPS
CCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEHHHHHCCCCCEEECCH
VIALRDYVRPTMRVPFTRFNVFLRDRFECQYCGGRYLHGELTFDHVVPRADGGETSWTNI
HHHHHHHCCHHHCCCHHHEEEEECCCCEEEECCCEEEECEEEHHHCCCCCCCCCCCHHHH
VAACSPCNARKDRRYLEPRRPPFEPTRQELMAAQRLFPPRFLHETWQDYLYWDVELER
EEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA