| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is catD [H]
Identifier: 146339853
GI number: 146339853
Start: 3056619
End: 3057401
Strand: Reverse
Name: catD [H]
Synonym: BRADO2855
Alternate gene names: 146339853
Gene position: 3057401-3056619 (Counterclockwise)
Preceding gene: 146339872
Following gene: 146339850
Centisome position: 41.0
GC content: 66.16
Gene sequence:
>783_bases ATGCCGATGATCGATGCCGACGGTTGCCTGCTGAACGTCACCGTCGAGGGCCGCGACGGCGGGCCGACCCTGATGCTGTC GAATTCGCTCGGCTCGACCTTGCAGATGTGGGAGCCGCAGATGCGTGCTTTCACGCAGGTGTTCCGCGTCATCCGCTATG ACCGGCGCGGCCATGGCAAATCGCAGGTCCCGCCGGGGCCCTATTCGATCGAGCGATGCGGCCGCGACGCGCTGGCGATC CTCGATGACCTCAACATCGAGAAGGTGCATTGGTGCGGCGTGTCGATGGGCGGCATGGTCGGCCAGTGGCTCGCGGCGCA CGCGCCCGAGCGGATCGGCAAGGTCGTCCTCGCCAACACCACTTGCTATTACCCTGATCCGGCGATCTGGGACGCGCGGA TCAAGGCGGTCCGGGACAGCGGCCTCGCGGGCATCGCCGATACCATCATTGCCGGCTGGCTGACACAGGAGTTCCGCGAT CGTCATCCGGATGTCGCCGAGCGGATGAAGGCGATGCTGGTGGCCACTCCGGTCGAAGGCTATCTCGCCTGCTGCGAGGC GCTGCGCGCCCTGGACCTGCGCGACGATCTGTCGAACGTCAAGAGCCCGACGCTGGTCGTTGCCGGCCGCTACGACAAGT CCACGCCGATCTCGATGGCGGAAGCGATTCGCAGCAGGATCGCAGGCGCGAGCCTGACGATCGTGGATGCGGCGCACATC TCCAATGTCGAGGCGGCCGGTCCCTTCAACGACGCCGTGCTCGGCTTTCTCACGCAGCGTTGA
Upstream 100 bases:
>100_bases CCGGTTTTGGTTGGCAGACGGCGGCCGCAATGGTTAGTTCGCCATCAAATCTGCACGATTCCTGCGGCGGTGGCCGCCTC CTGCGACAAGGATTGCGCCC
Downstream 100 bases:
>100_bases CGCTGGTCAGCGCGACATCATAACGCAGGAATGGTGATCAGGCGTTGGCGCCTGCGGCCGTCGCGGGCGTGACTTCGGGC TCCGCCGGCTCGACCGGAGC
Product: 3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MPMIDADGCLLNVTVEGRDGGPTLMLSNSLGSTLQMWEPQMRAFTQVFRVIRYDRRGHGKSQVPPGPYSIERCGRDALAI LDDLNIEKVHWCGVSMGGMVGQWLAAHAPERIGKVVLANTTCYYPDPAIWDARIKAVRDSGLAGIADTIIAGWLTQEFRD RHPDVAERMKAMLVATPVEGYLACCEALRALDLRDDLSNVKSPTLVVAGRYDKSTPISMAEAIRSRIAGASLTIVDAAHI SNVEAAGPFNDAVLGFLTQR
Sequences:
>Translated_260_residues MPMIDADGCLLNVTVEGRDGGPTLMLSNSLGSTLQMWEPQMRAFTQVFRVIRYDRRGHGKSQVPPGPYSIERCGRDALAI LDDLNIEKVHWCGVSMGGMVGQWLAAHAPERIGKVVLANTTCYYPDPAIWDARIKAVRDSGLAGIADTIIAGWLTQEFRD RHPDVAERMKAMLVATPVEGYLACCEALRALDLRDDLSNVKSPTLVVAGRYDKSTPISMAEAIRSRIAGASLTIVDAAHI SNVEAAGPFNDAVLGFLTQR >Mature_259_residues PMIDADGCLLNVTVEGRDGGPTLMLSNSLGSTLQMWEPQMRAFTQVFRVIRYDRRGHGKSQVPPGPYSIERCGRDALAIL DDLNIEKVHWCGVSMGGMVGQWLAAHAPERIGKVVLANTTCYYPDPAIWDARIKAVRDSGLAGIADTIIAGWLTQEFRDR HPDVAERMKAMLVATPVEGYLACCEALRALDLRDDLSNVKSPTLVVAGRYDKSTPISMAEAIRSRIAGASLTIVDAAHIS NVEAAGPFNDAVLGFLTQR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 28281; Mature: 28150
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMIDADGCLLNVTVEGRDGGPTLMLSNSLGSTLQMWEPQMRAFTQVFRVIRYDRRGHGK CCCCCCCCEEEEEEEECCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCC SQVPPGPYSIERCGRDALAILDDLNIEKVHWCGVSMGGMVGQWLAAHAPERIGKVVLANT CCCCCCCCHHHHHCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCHHHHCEEEEECC TCYYPDPAIWDARIKAVRDSGLAGIADTIIAGWLTQEFRDRHPDVAERMKAMLVATPVEG EEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH YLACCEALRALDLRDDLSNVKSPTLVVAGRYDKSTPISMAEAIRSRIAGASLTIVDAAHI HHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEHHHH SNVEAAGPFNDAVLGFLTQR CCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure PMIDADGCLLNVTVEGRDGGPTLMLSNSLGSTLQMWEPQMRAFTQVFRVIRYDRRGHGK CCCCCCCEEEEEEEECCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCC SQVPPGPYSIERCGRDALAILDDLNIEKVHWCGVSMGGMVGQWLAAHAPERIGKVVLANT CCCCCCCCHHHHHCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCHHHHCEEEEECC TCYYPDPAIWDARIKAVRDSGLAGIADTIIAGWLTQEFRDRHPDVAERMKAMLVATPVEG EEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH YLACCEALRALDLRDDLSNVKSPTLVVAGRYDKSTPISMAEAIRSRIAGASLTIVDAAHI HHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEHHHH SNVEAAGPFNDAVLGFLTQR CCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]