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The map label for this gene is yedA [H]

Identifier: 146339817

GI number: 146339817

Start: 3019929

End: 3020843

Strand: Reverse

Name: yedA [H]

Synonym: BRADO2818

Alternate gene names: 146339817

Gene position: 3020843-3019929 (Counterclockwise)

Preceding gene: 146339818

Following gene: 146339816

Centisome position: 40.51

GC content: 69.62

Gene sequence:

>915_bases
ATGCAGCGCCGCTCCGACCTCACGACAGACCTCGCCCTCCTGCTGCTGCTCTCCACGTTGTGGGGGGCCTCCTACACCTT
CATCAAGATCGGCGTGGAGACGATCCCGCCGCTCACCCTGATCGCCGCGCGCACGCTGATCGCCGGCCTGCTGCTCACAA
CCGTGCTCCGCGCCCGTGGGCTGGCCTGGCCGCGCGATCACGCGACCTGGCGCCGCTTCCTGGTCCAGGCCGGGCTGAAC
AGCGTCGTCCCGTTCACGCTGATCGCCTGGGCCGAGCGCACCGTCGAGGCCGGCCTCGCCACGATGCTGAATGCGACCTC
GCCGATCTTCGCATTTCTGCTGACCGCGCTGATCACCCGCCACGAGCCCGTCACACTGCGCAAGCTCGTCGGCGTCGCGG
CCGGCCTCGCCGGCACCTGCCTGATCGTCGGCGTCGAGGCGCTGCACGGGCTCGGCGAGCAATCAGGGGCTCAGCTCGCG
ATCGTCGCCGCCACCATCTGCTATGCGGGCGCGGCGATCGCCGGAAAGAGCTTCAAGGGCCTCGACCCGATGCTGCCCGC
GGCGGGATCACTGCTGTCGGGCGCCGCGATCCTGATCCCGCTCGCGCTGGTCGTCGACCACCCCTGGACCCTGACGCCAT
CGCTCCGCTCGCTGCTTGCGCTCGTCGCGCTGGCAACCGCCTCCACCGCGGCTGCGATGGTGATCTATTTTCGCCTCGTG
CAGACCCTCGGCTCGATCGGCGCGACAGCGCAATCCTATCTGCGGGTCCCGGTCGGCGTGGCGATCGCAGTCACCGCCCT
CGGCGAGCACCTCGCGCCGACGGCCTGGATCGGCCTCGCCTGCATCGTCCTCGGCGTCGTCGCGATGACGCTGCCGGCGC
TCAAGACGAAGATGAATGATCCAGCCAAAGGTTGA

Upstream 100 bases:

>100_bases
TGGCACGCGCTTTCACCAATGATACTTCGTCCCGCATCGAAACCTCAGGCGCAGCAGCGCGGCTAGGAGAAGCCATCCTT
CTCCCATCCGCGAGGCCCGC

Downstream 100 bases:

>100_bases
CCGCACACGCCAGTGCTGCTTTTCACCGGGGACGGCAACGCTGGATCGTTCAAATGCAATATATCTTCGTCACGGTTCTC
ATCGCGCTGGCGACCGCGAT

Product: putative inner membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MQRRSDLTTDLALLLLLSTLWGASYTFIKIGVETIPPLTLIAARTLIAGLLLTTVLRARGLAWPRDHATWRRFLVQAGLN
SVVPFTLIAWAERTVEAGLATMLNATSPIFAFLLTALITRHEPVTLRKLVGVAAGLAGTCLIVGVEALHGLGEQSGAQLA
IVAATICYAGAAIAGKSFKGLDPMLPAAGSLLSGAAILIPLALVVDHPWTLTPSLRSLLALVALATASTAAAMVIYFRLV
QTLGSIGATAQSYLRVPVGVAIAVTALGEHLAPTAWIGLACIVLGVVAMTLPALKTKMNDPAKG

Sequences:

>Translated_304_residues
MQRRSDLTTDLALLLLLSTLWGASYTFIKIGVETIPPLTLIAARTLIAGLLLTTVLRARGLAWPRDHATWRRFLVQAGLN
SVVPFTLIAWAERTVEAGLATMLNATSPIFAFLLTALITRHEPVTLRKLVGVAAGLAGTCLIVGVEALHGLGEQSGAQLA
IVAATICYAGAAIAGKSFKGLDPMLPAAGSLLSGAAILIPLALVVDHPWTLTPSLRSLLALVALATASTAAAMVIYFRLV
QTLGSIGATAQSYLRVPVGVAIAVTALGEHLAPTAWIGLACIVLGVVAMTLPALKTKMNDPAKG
>Mature_304_residues
MQRRSDLTTDLALLLLLSTLWGASYTFIKIGVETIPPLTLIAARTLIAGLLLTTVLRARGLAWPRDHATWRRFLVQAGLN
SVVPFTLIAWAERTVEAGLATMLNATSPIFAFLLTALITRHEPVTLRKLVGVAAGLAGTCLIVGVEALHGLGEQSGAQLA
IVAATICYAGAAIAGKSFKGLDPMLPAAGSLLSGAAILIPLALVVDHPWTLTPSLRSLLALVALATASTAAAMVIYFRLV
QTLGSIGATAQSYLRVPVGVAIAVTALGEHLAPTAWIGLACIVLGVVAMTLPALKTKMNDPAKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=307, Percent_Identity=29.3159609120521, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31576; Mature: 31576

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRSDLTTDLALLLLLSTLWGASYTFIKIGVETIPPLTLIAARTLIAGLLLTTVLRARG
CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
LAWPRDHATWRRFLVQAGLNSVVPFTLIAWAERTVEAGLATMLNATSPIFAFLLTALITR
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
HEPVTLRKLVGVAAGLAGTCLIVGVEALHGLGEQSGAQLAIVAATICYAGAAIAGKSFKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
LDPMLPAAGSLLSGAAILIPLALVVDHPWTLTPSLRSLLALVALATASTAAAMVIYFRLV
CCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLGSIGATAQSYLRVPVGVAIAVTALGEHLAPTAWIGLACIVLGVVAMTLPALKTKMND
HHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAKG
CCCC
>Mature Secondary Structure
MQRRSDLTTDLALLLLLSTLWGASYTFIKIGVETIPPLTLIAARTLIAGLLLTTVLRARG
CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
LAWPRDHATWRRFLVQAGLNSVVPFTLIAWAERTVEAGLATMLNATSPIFAFLLTALITR
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
HEPVTLRKLVGVAAGLAGTCLIVGVEALHGLGEQSGAQLAIVAATICYAGAAIAGKSFKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
LDPMLPAAGSLLSGAAILIPLALVVDHPWTLTPSLRSLLALVALATASTAAAMVIYFRLV
CCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLGSIGATAQSYLRVPVGVAIAVTALGEHLAPTAWIGLACIVLGVVAMTLPALKTKMND
HHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAKG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]