Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146339751

Identifier: 146339751

GI number: 146339751

Start: 2956894

End: 2958558

Strand: Reverse

Name: 146339751

Synonym: BRADO2751

Alternate gene names: NA

Gene position: 2958558-2956894 (Counterclockwise)

Preceding gene: 146339753

Following gene: 146339750

Centisome position: 39.68

GC content: 70.21

Gene sequence:

>1665_bases
ATGTCGGCATTGCGCTACCTCTTAGTTCTCATGCTGCTGCTGCTGGGCAGCAGCACGGCCGCGCTGGCCGAGAAGCGGGT
CGCGCTGGTGATCGGCAATTCAACCTACAAGACCGTCGCCCGGCTATCGAACCCCGCCAATGATGCGAAGCTCGTCGGCG
ACATGTTCCGCAACGCCGGCTTCGAGCGCGTCGATGTCAGGCTGGATCTCGGCGTGCAGGAGATGCGCCGTGCCTTGCGC
GAATTCGGCGCGCGGGCGCGCGAGGCGGAGGTGGCCGTGATCTACTACGCCGGCCACGGCATCGAGCTCGACGGCGTCAA
CTACCTGATCCCGACCGACGCCTCGCTCGAGGCCGACAGCGACGTGCTCGACGAGGCGATCGCGCTGGACCGCGTGCTGT
TCGCGATCGAGCCCGCCAGGCAGCTGCGCCTCGTCGTGCTCGACGCCTGCCGCGACAACCCGTTCGCCAAGACGATGAAG
CGCAGCATCGCCTCGCGCAGCGTCGGACGTGGACTCGCCAAGGTCGAGCCGTCGAGCCCGAACACGATGATCGCGTTCTC
CGCCAAGGCCGGCTCGACCGCCGCCGACGGCGATGCCAGCAACAGCCCCTACGCGATGGCGCTGGTCACACATCTGCCGA
AGCCCGGCCTCGATCTGCGCCGGGCCTTCGGCTTCGTCCGCGATGACGTGCTGAAGGCGACCGGCTATCGGCAGGAGCCC
TATGTCTACGGCTCGCTCGGCGGCAACGACGTCGCGCTGGTGCCGGCAGCACCATCCCCGAGCGCGGCCACCGATCCCGA
CGCGGGGATGCGGCGCGACTACGAGCTGGCGGAACGCGCCGGCAGCCCGGCGGCGTTCGACGCGTTTCTCGAAAAATACC
CCACCGGCTTCTACGCCACCCTCGCCAAGGCGCAGCGCGCCAAGCTGTCGCCGACCGCCGCCGCAAAGCCCGCCGAGTTG
GCGCGCGCCCCCGAGGCTGCGGCCCCCGAGGTTACGCGCAGCCCGCCCGATCCGGCCCAGCAGCCCGAGAAGCCGGCCCC
CTCCTCCGCACCGACTGCGGTCGCGGCGGTACAGCCTCCCCCCGCGACGCCGACGGCCGCGCCGCCGCCTGATCTGCCGC
GCCTGCTCGCCGCGGAACTGCGCCGCGTCGGCTGCAGCACCGCCGACAACGACGGCACTTGGGATCTCCATGCGCGCCGG
GCGCTGGAGCGCTTCAACAAGCAGGCCGGAACCAGGTTCGACGTCCAGGTCGCGAGTATCGATGCGCTGGGGGCCGTGAA
GGCGAAGACATCACGCATCTGTCCCCTGCTCTGCGGCAAGGGCCAGCGCGCCGAGGACGAGGCCTGCGTCAAGATCACCT
GTCCCGCGGGTCAGGCGCTGGATGAGGATGGCGACTGCGTCAGGCGCAAGGGCGAGCCCGTCACCAAGAAGCCCGAGGAG
CCGGCGCGAAAGAAGGAGCCCGCGATGGCGATGCGCTCCGAGTCGGAGACCCGGCGCGCCAGCAGCGGCGGCCGCTGTAC
CAGCATCAATCAGCGCTGCGCGATTCAGATCGGCGGCCGCTGCAATGCCGCCACGGGCGCATGGGAGTACGGCCGCAATG
GTGCCGGCGGCGACACGATGTCGTTCAACAACTGCGTCAGCCGGATGATGGCCGGGGGCCGGTGA

Upstream 100 bases:

>100_bases
GGCAGAGGCCGGCGCCGCGAGCCTGTCCGCGCACCTTGCGTGGCCGACATGGCTGGATAGTGTGTCACAGCCTCGACCGT
GGGTATTGTCCGGGAAACCA

Downstream 100 bases:

>100_bases
GCCGCGACGCTGCCCGGAGCGCTCAGCTTCATTGTGAGCGAGACAACTGGAACGATCTGGAAACGGATTGAAAACCCGCT
CACAATGCGCGTCCCAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Caspase Domain Protein; Caspase-Like Domain- And TPR Repeat-Containing Peptidase; Peptidase C; Caspase-Like Domain-Containing Protein; Peptidase Protein; Caspase Domain-Containing Protein; TPR Repeat-Containing Caspace; GUN4-Like Family; Caspase; Peptidylprolyl Isomerase; Caspase-1 P; ICE-Like Protease

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MSALRYLLVLMLLLLGSSTAALAEKRVALVIGNSTYKTVARLSNPANDAKLVGDMFRNAGFERVDVRLDLGVQEMRRALR
EFGARAREAEVAVIYYAGHGIELDGVNYLIPTDASLEADSDVLDEAIALDRVLFAIEPARQLRLVVLDACRDNPFAKTMK
RSIASRSVGRGLAKVEPSSPNTMIAFSAKAGSTAADGDASNSPYAMALVTHLPKPGLDLRRAFGFVRDDVLKATGYRQEP
YVYGSLGGNDVALVPAAPSPSAATDPDAGMRRDYELAERAGSPAAFDAFLEKYPTGFYATLAKAQRAKLSPTAAAKPAEL
ARAPEAAAPEVTRSPPDPAQQPEKPAPSSAPTAVAAVQPPPATPTAAPPPDLPRLLAAELRRVGCSTADNDGTWDLHARR
ALERFNKQAGTRFDVQVASIDALGAVKAKTSRICPLLCGKGQRAEDEACVKITCPAGQALDEDGDCVRRKGEPVTKKPEE
PARKKEPAMAMRSESETRRASSGGRCTSINQRCAIQIGGRCNAATGAWEYGRNGAGGDTMSFNNCVSRMMAGGR

Sequences:

>Translated_554_residues
MSALRYLLVLMLLLLGSSTAALAEKRVALVIGNSTYKTVARLSNPANDAKLVGDMFRNAGFERVDVRLDLGVQEMRRALR
EFGARAREAEVAVIYYAGHGIELDGVNYLIPTDASLEADSDVLDEAIALDRVLFAIEPARQLRLVVLDACRDNPFAKTMK
RSIASRSVGRGLAKVEPSSPNTMIAFSAKAGSTAADGDASNSPYAMALVTHLPKPGLDLRRAFGFVRDDVLKATGYRQEP
YVYGSLGGNDVALVPAAPSPSAATDPDAGMRRDYELAERAGSPAAFDAFLEKYPTGFYATLAKAQRAKLSPTAAAKPAEL
ARAPEAAAPEVTRSPPDPAQQPEKPAPSSAPTAVAAVQPPPATPTAAPPPDLPRLLAAELRRVGCSTADNDGTWDLHARR
ALERFNKQAGTRFDVQVASIDALGAVKAKTSRICPLLCGKGQRAEDEACVKITCPAGQALDEDGDCVRRKGEPVTKKPEE
PARKKEPAMAMRSESETRRASSGGRCTSINQRCAIQIGGRCNAATGAWEYGRNGAGGDTMSFNNCVSRMMAGGR
>Mature_553_residues
SALRYLLVLMLLLLGSSTAALAEKRVALVIGNSTYKTVARLSNPANDAKLVGDMFRNAGFERVDVRLDLGVQEMRRALRE
FGARAREAEVAVIYYAGHGIELDGVNYLIPTDASLEADSDVLDEAIALDRVLFAIEPARQLRLVVLDACRDNPFAKTMKR
SIASRSVGRGLAKVEPSSPNTMIAFSAKAGSTAADGDASNSPYAMALVTHLPKPGLDLRRAFGFVRDDVLKATGYRQEPY
VYGSLGGNDVALVPAAPSPSAATDPDAGMRRDYELAERAGSPAAFDAFLEKYPTGFYATLAKAQRAKLSPTAAAKPAELA
RAPEAAAPEVTRSPPDPAQQPEKPAPSSAPTAVAAVQPPPATPTAAPPPDLPRLLAAELRRVGCSTADNDGTWDLHARRA
LERFNKQAGTRFDVQVASIDALGAVKAKTSRICPLLCGKGQRAEDEACVKITCPAGQALDEDGDCVRRKGEPVTKKPEEP
ARKKEPAMAMRSESETRRASSGGRCTSINQRCAIQIGGRCNAATGAWEYGRNGAGGDTMSFNNCVSRMMAGGR

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58841; Mature: 58710

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50208 CASPASE_P20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALRYLLVLMLLLLGSSTAALAEKRVALVIGNSTYKTVARLSNPANDAKLVGDMFRNAG
CHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC
FERVDVRLDLGVQEMRRALREFGARAREAEVAVIYYAGHGIELDGVNYLIPTDASLEADS
CEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCEEEECCCCCCCCCH
DVLDEAIALDRVLFAIEPARQLRLVVLDACRDNPFAKTMKRSIASRSVGRGLAKVEPSSP
HHHHHHHHHHHHHHHCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCC
NTMIAFSAKAGSTAADGDASNSPYAMALVTHLPKPGLDLRRAFGFVRDDVLKATGYRQEP
CEEEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
YVYGSLGGNDVALVPAAPSPSAATDPDAGMRRDYELAERAGSPAAFDAFLEKYPTGFYAT
EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHH
LAKAQRAKLSPTAAAKPAELARAPEAAAPEVTRSPPDPAQQPEKPAPSSAPTAVAAVQPP
HHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PATPTAAPPPDLPRLLAAELRRVGCSTADNDGTWDLHARRALERFNKQAGTRFDVQVASI
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECC
DALGAVKAKTSRICPLLCGKGQRAEDEACVKITCPAGQALDEDGDCVRRKGEPVTKKPEE
HHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCC
PARKKEPAMAMRSESETRRASSGGRCTSINQRCAIQIGGRCNAATGAWEYGRNGAGGDTM
CHHHCCCHHHHHCCHHHHHHCCCCCEECCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCC
SFNNCVSRMMAGGR
CHHHHHHHHHCCCC
>Mature Secondary Structure 
SALRYLLVLMLLLLGSSTAALAEKRVALVIGNSTYKTVARLSNPANDAKLVGDMFRNAG
HHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC
FERVDVRLDLGVQEMRRALREFGARAREAEVAVIYYAGHGIELDGVNYLIPTDASLEADS
CEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCEEEECCCCCCCCCH
DVLDEAIALDRVLFAIEPARQLRLVVLDACRDNPFAKTMKRSIASRSVGRGLAKVEPSSP
HHHHHHHHHHHHHHHCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCC
NTMIAFSAKAGSTAADGDASNSPYAMALVTHLPKPGLDLRRAFGFVRDDVLKATGYRQEP
CEEEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
YVYGSLGGNDVALVPAAPSPSAATDPDAGMRRDYELAERAGSPAAFDAFLEKYPTGFYAT
EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHH
LAKAQRAKLSPTAAAKPAELARAPEAAAPEVTRSPPDPAQQPEKPAPSSAPTAVAAVQPP
HHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PATPTAAPPPDLPRLLAAELRRVGCSTADNDGTWDLHARRALERFNKQAGTRFDVQVASI
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECC
DALGAVKAKTSRICPLLCGKGQRAEDEACVKITCPAGQALDEDGDCVRRKGEPVTKKPEE
HHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCC
PARKKEPAMAMRSESETRRASSGGRCTSINQRCAIQIGGRCNAATGAWEYGRNGAGGDTM
CHHHCCCHHHHHCCHHHHHHCCCCCEECCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCC
SFNNCVSRMMAGGR
CHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA