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The map label for this gene is 146339679

Identifier: 146339679

GI number: 146339679

Start: 2875221

End: 2876594

Strand: Reverse

Name: 146339679

Synonym: BRADO2674

Alternate gene names: NA

Gene position: 2876594-2875221 (Counterclockwise)

Preceding gene: 146339681

Following gene: 146339677

Centisome position: 38.58

GC content: 67.47

Gene sequence:

>1374_bases
ATGGACGTCAATCGCCGCCGCATTCTCGCTGGATCGGCTGCCGGGGCCGCCGGAGCCCTTGCTTTGCCGACTGTTGCCGC
AGAGGGCGCTCCCTTGATCTCCACGCTCGGCCGCGACGCCACGCAGTACGGCGTCAAGCCGAACAGCCCCGACGATCAGA
CCCGCGCCCTGCAGCGGGCGATCGATGAGGCAACGCGGGCGCAGGCGCCGCTGGCGCTGCCGCCCGGCGTTTACCGGAGC
TCCATGCTGCGGCTGTCCAAAGGCAGCAAGCTGATCGGCGTCCGCGGCGCCACCAGGCTCGTGTTCACCGGCGGCGCGCC
CTCGCTGCTCTCGGCCGAAGGCGCCGACGGTGCTGATGTCACCGCCGTCTCGCTCGATGGCGGCGGCATCGCCCTGCCCC
AGCGCCGCGGACTGCTGCACGTGGCCGCCGGCAACGATGTCAGGATCATCGATTGCGAGATCACCCGCTCCGGCGGCAGC
GGCATCTGGCTCGAGCAGGTGTCCGGCGACGTCAGCGGCAACGTCATCATCGACATCGCGGTCACTGCCATCGTGTCGTT
CGACGCGCTCGGCCTGATCGTGTCGCGCAACACCATCAAGGGCACGCGCGACAACGGCATCGAGATCCTGCGGACCGCGA
TCGGCGACGACGGCACCATGGTGCTCGACAATCACATCGAGGACATCAAGGCCGGCCCCGGCGGCTCCGGCCAGTACGGC
AATGCCATCAACGCCTTCCGCGCCGGCAATGTCATCGTGAGAGGCAATCGCATCAGGAACTGCGACTACTCGGCCGTTCG
CGGCAACTCGGCCTCAAACATCCAGATCGTCGGCAACAGCGTCACCGATGTGCGCGAGGTCGCGCTGTATTCGGAGTTTG
CGTTCGAAGGCGCCGTCATCAGCGGCAACACGGTCGACGGCGCCGCGTTCGGCGTCTCCGTCTGCAACTTCAACGAAGGC
GGTCGCATTGCCGTGGTCCAGGGCAACATCATCCGCAACCTGATCCCCAAGCGGCCGATCGGTACCGCGCCGGACGACGA
TGCCGGCATCGGCATCTATGTCGAGGCGGATTCCTCCGTGACGGGCAACGTGGTGGAGAACGCCCCGTCCTATGGCATCG
TCGCCGGCTGGGGCCGCTACCTCCGCGACGTCGTCATCTCCGGCAACGTGGTACGCAACGCGCTCGCCGGCATCGGCGTG
TCCGTGGTTCAGGGTGCGGGCACTGCGCTCGTCAGCAACAACTTGATCTCCGGCACCCCGCGCGGCGCGGTGATCGGGCT
CGATCACATCAAGCCGGTGACGTCAGACCTCACGCAGGACGGTGCGCAACGCTTTGCGCAGCTGACCATGGCCGGCAACG
CCGTCAGGCGATGA

Upstream 100 bases:

>100_bases
CGGCAACAATCTCCCGCGGCAGCGCTCATCCTCAGCATCAGGATTGAGGCTTTCGGCTTAAGTCGTGTCAGCACGTCATC
TTTTGCCAGAGACGCTGACC

Downstream 100 bases:

>100_bases
CTGACGCGCCCTGCTGCGGCCCCCCGCCTGAGCGAGGTTCGCGCGGTCATTCGGGGGCAATCGTCGATCCGAAGCCGCGA
AGCGGCTGCGCGTTGGCGAT

Product: putative pectin lyase fold

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Pectin Lyase Fold; Parallel Beta-Helix Repeat-Containing Protein

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MDVNRRRILAGSAAGAAGALALPTVAAEGAPLISTLGRDATQYGVKPNSPDDQTRALQRAIDEATRAQAPLALPPGVYRS
SMLRLSKGSKLIGVRGATRLVFTGGAPSLLSAEGADGADVTAVSLDGGGIALPQRRGLLHVAAGNDVRIIDCEITRSGGS
GIWLEQVSGDVSGNVIIDIAVTAIVSFDALGLIVSRNTIKGTRDNGIEILRTAIGDDGTMVLDNHIEDIKAGPGGSGQYG
NAINAFRAGNVIVRGNRIRNCDYSAVRGNSASNIQIVGNSVTDVREVALYSEFAFEGAVISGNTVDGAAFGVSVCNFNEG
GRIAVVQGNIIRNLIPKRPIGTAPDDDAGIGIYVEADSSVTGNVVENAPSYGIVAGWGRYLRDVVISGNVVRNALAGIGV
SVVQGAGTALVSNNLISGTPRGAVIGLDHIKPVTSDLTQDGAQRFAQLTMAGNAVRR

Sequences:

>Translated_457_residues
MDVNRRRILAGSAAGAAGALALPTVAAEGAPLISTLGRDATQYGVKPNSPDDQTRALQRAIDEATRAQAPLALPPGVYRS
SMLRLSKGSKLIGVRGATRLVFTGGAPSLLSAEGADGADVTAVSLDGGGIALPQRRGLLHVAAGNDVRIIDCEITRSGGS
GIWLEQVSGDVSGNVIIDIAVTAIVSFDALGLIVSRNTIKGTRDNGIEILRTAIGDDGTMVLDNHIEDIKAGPGGSGQYG
NAINAFRAGNVIVRGNRIRNCDYSAVRGNSASNIQIVGNSVTDVREVALYSEFAFEGAVISGNTVDGAAFGVSVCNFNEG
GRIAVVQGNIIRNLIPKRPIGTAPDDDAGIGIYVEADSSVTGNVVENAPSYGIVAGWGRYLRDVVISGNVVRNALAGIGV
SVVQGAGTALVSNNLISGTPRGAVIGLDHIKPVTSDLTQDGAQRFAQLTMAGNAVRR
>Mature_457_residues
MDVNRRRILAGSAAGAAGALALPTVAAEGAPLISTLGRDATQYGVKPNSPDDQTRALQRAIDEATRAQAPLALPPGVYRS
SMLRLSKGSKLIGVRGATRLVFTGGAPSLLSAEGADGADVTAVSLDGGGIALPQRRGLLHVAAGNDVRIIDCEITRSGGS
GIWLEQVSGDVSGNVIIDIAVTAIVSFDALGLIVSRNTIKGTRDNGIEILRTAIGDDGTMVLDNHIEDIKAGPGGSGQYG
NAINAFRAGNVIVRGNRIRNCDYSAVRGNSASNIQIVGNSVTDVREVALYSEFAFEGAVISGNTVDGAAFGVSVCNFNEG
GRIAVVQGNIIRNLIPKRPIGTAPDDDAGIGIYVEADSSVTGNVVENAPSYGIVAGWGRYLRDVVISGNVVRNALAGIGV
SVVQGAGTALVSNNLISGTPRGAVIGLDHIKPVTSDLTQDGAQRFAQLTMAGNAVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46867; Mature: 46867

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00356 HTH_LACI_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVNRRRILAGSAAGAAGALALPTVAAEGAPLISTLGRDATQYGVKPNSPDDQTRALQRA
CCCCCEEEEEECCCCCCCCEECCHHHCCCCHHHHHHCCCHHHCCCCCCCCCHHHHHHHHH
IDEATRAQAPLALPPGVYRSSMLRLSKGSKLIGVRGATRLVFTGGAPSLLSAEGADGADV
HHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCEECCCCCCCCE
TAVSLDGGGIALPQRRGLLHVAAGNDVRIIDCEITRSGGSGIWLEQVSGDVSGNVIIDIA
EEEEECCCCEECCCCCCEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEE
VTAIVSFDALGLIVSRNTIKGTRDNGIEILRTAIGDDGTMVLDNHIEDIKAGPGGSGQYG
HHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHCCCCCCCCCCC
NAINAFRAGNVIVRGNRIRNCDYSAVRGNSASNIQIVGNSVTDVREVALYSEFAFEGAVI
CCHHHEECCCEEEECCEECCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEE
SGNTVDGAAFGVSVCNFNEGGRIAVVQGNIIRNLIPKRPIGTAPDDDAGIGIYVEADSSV
ECCCCCCCEEEEEEEEECCCCEEEEEECCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCC
TGNVVENAPSYGIVAGWGRYLRDVVISGNVVRNALAGIGVSVVQGAGTALVSNNLISGTP
CCCHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCEEEECCCCCCCC
RGAVIGLDHIKPVTSDLTQDGAQRFAQLTMAGNAVRR
CCEEEEHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MDVNRRRILAGSAAGAAGALALPTVAAEGAPLISTLGRDATQYGVKPNSPDDQTRALQRA
CCCCCEEEEEECCCCCCCCEECCHHHCCCCHHHHHHCCCHHHCCCCCCCCCHHHHHHHHH
IDEATRAQAPLALPPGVYRSSMLRLSKGSKLIGVRGATRLVFTGGAPSLLSAEGADGADV
HHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCEECCCCCCCCE
TAVSLDGGGIALPQRRGLLHVAAGNDVRIIDCEITRSGGSGIWLEQVSGDVSGNVIIDIA
EEEEECCCCEECCCCCCEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEE
VTAIVSFDALGLIVSRNTIKGTRDNGIEILRTAIGDDGTMVLDNHIEDIKAGPGGSGQYG
HHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHCCCCCCCCCCC
NAINAFRAGNVIVRGNRIRNCDYSAVRGNSASNIQIVGNSVTDVREVALYSEFAFEGAVI
CCHHHEECCCEEEECCEECCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEE
SGNTVDGAAFGVSVCNFNEGGRIAVVQGNIIRNLIPKRPIGTAPDDDAGIGIYVEADSSV
ECCCCCCCEEEEEEEEECCCCEEEEEECCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCC
TGNVVENAPSYGIVAGWGRYLRDVVISGNVVRNALAGIGVSVVQGAGTALVSNNLISGTP
CCCHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCEEEECCCCCCCC
RGAVIGLDHIKPVTSDLTQDGAQRFAQLTMAGNAVRR
CCEEEEHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA