| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339673
Identifier: 146339673
GI number: 146339673
Start: 2869612
End: 2870721
Strand: Reverse
Name: 146339673
Synonym: BRADO2668
Alternate gene names: NA
Gene position: 2870721-2869612 (Counterclockwise)
Preceding gene: 146339674
Following gene: 146339670
Centisome position: 38.5
GC content: 69.01
Gene sequence:
>1110_bases ATGCCCGCGAAGTCCGCGCCGAACGAGAGCCTGCTGGACGAGCTGGAGGACACGCTCGCGCACGGCACCGTGGCGCGACG GGTCGAGACGCTGCGCAAGGTGACGGACCTGTTCGTCGACGGCGCGACGGATTTTGCCGACGATCAGGTGGCGCTGTTCG ATGACGTCTTCGCATGCCTGATCGATCACATCGAGATCTCCGCGCGGGCTCTGCTGGCGAACCGCCTGGCGACAATCGAT GCGGCGCCGCCGCGTACGCTGCACCGGCTGGCCGATGACGACGCCATCGAGGTCGCCGGTCCCGTGTTGTCGAAGTCCGA GCGGCTCGATGACGCCGCACTGATCCGGACCGCCGAGACCAAGAGCCAGGCGCATCTGCTCGCGATCTCGATCCGCCGCG TGCTGAGCCGTGCGGTCACCGACATTCTGCTCCGGCGCGGCAACGACGCGGTGGTGCAAAGCACCGTCAGCAATCCCGGC GCCGAACTGTCGGAGCGCAACTTCGAGAGCTTGGTCGATCGCGCCGCGCTCGACGAGAACCTCGCCGCGTGCCTCGCGAT GCGGCCCAACCTGCCGCGCCACTTTTATCTGAAGCTCGTCGCCAAGGCGTCCGTCACCGTGCGCGCGCGGCTTGAGGCGG ACAATCCGAAGCTGGCGCCGGAGGTCTCCTCGGCGGTGCGGACGGCGAGCCGGTGCGCGCGGTCGAGCGCCGTGGCGCTG ACCAGCCAGACCGAGATCGCGCACGCGCTGGTGCGCTCGTTGCATGCCGACGGCCGGCTCGACCCGCAGCTCGTGGCGCA GTTCATGGAGCAGAAGAAGTTCGACGAGGCCAACGCCGCCGTCGCGGCCATGGCCAACGTGCCGATCGCCGTCGCCGAGA GCATCATGATCGAGAGCCGCGCCGAGGGCGTGATGATCCTCGCCAAGGTCGCCGGCCTGTCATGGCCGGTGGTCAAGTCG ATGATCACGATGCGTGATGAGCTGACGGGCGCGACGCCGACCGACCTCGTCTCGGCCAAGGTCACCTATGAGCGGCTCCG CCGCTCAACGGCGCAGCAGGTGCTGCGCTTCCACCGCGTGCAGGACGCCGCCGCGCCGGCCGAGGTGTGA
Upstream 100 bases:
>100_bases GACGAGACCGCCGAGTCCCTGCTCGCCCGCGCGGATCATGCGCTCTACGACTCCAAGGCCAATGGGCGCAATCGCGTCAC CGGCACCTGAGCATCCCAGC
Downstream 100 bases:
>100_bases GCGCCCCTTCGCGGCCTCAATAGCGCAGAACACGCGCGCCGATGGCGGCGCCGAGGCCGGCCACGATCAGCGCCGCGGCG GTGTACCAGGTGGCGACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MPAKSAPNESLLDELEDTLAHGTVARRVETLRKVTDLFVDGATDFADDQVALFDDVFACLIDHIEISARALLANRLATID AAPPRTLHRLADDDAIEVAGPVLSKSERLDDAALIRTAETKSQAHLLAISIRRVLSRAVTDILLRRGNDAVVQSTVSNPG AELSERNFESLVDRAALDENLAACLAMRPNLPRHFYLKLVAKASVTVRARLEADNPKLAPEVSSAVRTASRCARSSAVAL TSQTEIAHALVRSLHADGRLDPQLVAQFMEQKKFDEANAAVAAMANVPIAVAESIMIESRAEGVMILAKVAGLSWPVVKS MITMRDELTGATPTDLVSAKVTYERLRRSTAQQVLRFHRVQDAAAPAEV
Sequences:
>Translated_369_residues MPAKSAPNESLLDELEDTLAHGTVARRVETLRKVTDLFVDGATDFADDQVALFDDVFACLIDHIEISARALLANRLATID AAPPRTLHRLADDDAIEVAGPVLSKSERLDDAALIRTAETKSQAHLLAISIRRVLSRAVTDILLRRGNDAVVQSTVSNPG AELSERNFESLVDRAALDENLAACLAMRPNLPRHFYLKLVAKASVTVRARLEADNPKLAPEVSSAVRTASRCARSSAVAL TSQTEIAHALVRSLHADGRLDPQLVAQFMEQKKFDEANAAVAAMANVPIAVAESIMIESRAEGVMILAKVAGLSWPVVKS MITMRDELTGATPTDLVSAKVTYERLRRSTAQQVLRFHRVQDAAAPAEV >Mature_368_residues PAKSAPNESLLDELEDTLAHGTVARRVETLRKVTDLFVDGATDFADDQVALFDDVFACLIDHIEISARALLANRLATIDA APPRTLHRLADDDAIEVAGPVLSKSERLDDAALIRTAETKSQAHLLAISIRRVLSRAVTDILLRRGNDAVVQSTVSNPGA ELSERNFESLVDRAALDENLAACLAMRPNLPRHFYLKLVAKASVTVRARLEADNPKLAPEVSSAVRTASRCARSSAVALT SQTEIAHALVRSLHADGRLDPQLVAQFMEQKKFDEANAAVAAMANVPIAVAESIMIESRAEGVMILAKVAGLSWPVVKSM ITMRDELTGATPTDLVSAKVTYERLRRSTAQQVLRFHRVQDAAAPAEV
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39932; Mature: 39801
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKSAPNESLLDELEDTLAHGTVARRVETLRKVTDLFVDGATDFADDQVALFDDVFACL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH IDHIEISARALLANRLATIDAAPPRTLHRLADDDAIEVAGPVLSKSERLDDAALIRTAET HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHC KSQAHLLAISIRRVLSRAVTDILLRRGNDAVVQSTVSNPGAELSERNFESLVDRAALDEN HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LAACLAMRPNLPRHFYLKLVAKASVTVRARLEADNPKLAPEVSSAVRTASRCARSSAVAL HHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEE TSQTEIAHALVRSLHADGRLDPQLVAQFMEQKKFDEANAAVAAMANVPIAVAESIMIESR CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHC AEGVMILAKVAGLSWPVVKSMITMRDELTGATPTDLVSAKVTYERLRRSTAQQVLRFHRV CCCEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QDAAAPAEV HHCCCCCCC >Mature Secondary Structure PAKSAPNESLLDELEDTLAHGTVARRVETLRKVTDLFVDGATDFADDQVALFDDVFACL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH IDHIEISARALLANRLATIDAAPPRTLHRLADDDAIEVAGPVLSKSERLDDAALIRTAET HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHC KSQAHLLAISIRRVLSRAVTDILLRRGNDAVVQSTVSNPGAELSERNFESLVDRAALDEN HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LAACLAMRPNLPRHFYLKLVAKASVTVRARLEADNPKLAPEVSSAVRTASRCARSSAVAL HHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEE TSQTEIAHALVRSLHADGRLDPQLVAQFMEQKKFDEANAAVAAMANVPIAVAESIMIESR CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHC AEGVMILAKVAGLSWPVVKSMITMRDELTGATPTDLVSAKVTYERLRRSTAQQVLRFHRV CCCEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QDAAAPAEV HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA