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The map label for this gene is yliC [C]

Identifier: 146339521

GI number: 146339521

Start: 2684577

End: 2685557

Strand: Reverse

Name: yliC [C]

Synonym: BRADO2511

Alternate gene names: 146339521

Gene position: 2685557-2684577 (Counterclockwise)

Preceding gene: 146339522

Following gene: 146339520

Centisome position: 36.02

GC content: 63.4

Gene sequence:

>981_bases
ATGCTCGCCTTCACGCTTCGCCGAGCAATTCAGGCCATCGGCGTCATGATCGCCGTCGGGATAATCGCGTTCGCGATGTT
CCGCTTCGCCGGCGATCCCGTCAGCCAGCTCGTGCCGATCGACGCTTCGGCGGCGGAACGCGCCCAGATCCGCCAGTCCC
TCGGCCTCGACGATCCTTTCATCGTGCAGTTCGGCCGATACCTGTTCGATGCCGCGCAGTTCAAGTTCGGCGTGTCCTAC
CAATTCCGCCAGCCGGTCTCCGATCTCCTCAAGGAGCGCATGCCCGCGACGCTGGAGCTCGCCGTCTGCGCGACCATCCT
GGCCTTGGTCTTCGGGATCATCATGGGCGTGTTCTCCGCGCTGCGCCGCGACTCGCTGCTGGCAAAGCTGTTCCAGATGG
TGTCGCTGATCGGCATCTCGCTGCCGACCTTCCTGATCGGCATTCTGCTGATCTACCTGTTCTCGGTCACGCTCGGCTGG
CTGCCATCGTTCGGCCGCGGCGACGTCGTGAAGCTCGGCTGGTGGTCGACCGGCCTGCTGACGCTCTCCGGCTGGAAGGC
GCTGATCATGCCGTCGATCACGCTCGGCCTGTTCCAGATGACCTTGATCATGCGTCTCGTCCGCGCCGAGATGCTGGAAG
TGCTGCGCACCGACTACATCCGCTTCGCGCGCGCGCGAGGCCTGACAACACGCGCGATCCATTTCGGCCATGCGCTGCGC
AACACGCTGGTTCCGGTCATCACCGTGGTCGGCCTGCAGTTCGGATCGGTGATCGCGTTCTCGATCATTACCGAGCAGGT
GTTCCAATGGCCGGGCATGGGCCTGTTATTCGTGCAGGCGGTGCAGAACGTCGACATCCCGATCATGGCGGCGTACCTGA
TGATGGTGTCGCTGATCTTCGTCACCATCAATCTCGTGGTTGATATCCTCTACACCGTGGTCGATCCGCGCCTGCGCGCG
ACCATCAGCCGTCCGGCCTGA

Upstream 100 bases:

>100_bases
GACGACCCAAAGTCCCGGAAAGCAGAACTGCTTTTCGGGACTTTTCATTTTCCACGGCAGGTGCTACCCGCCGCGCGATC
GAGAGGACTGAAAGGACCAG

Downstream 100 bases:

>100_bases
TCATGAGCGACGCAGCCCTCCCCCATCCCACTCCCGTTCAAGCGCCGCGCGCCACCAGCGACGGCTGGCTGAAGCGCGCG
CTCGCGAGCGACCTGTTCTA

Product: putative oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLAFTLRRAIQAIGVMIAVGIIAFAMFRFAGDPVSQLVPIDASAAERAQIRQSLGLDDPFIVQFGRYLFDAAQFKFGVSY
QFRQPVSDLLKERMPATLELAVCATILALVFGIIMGVFSALRRDSLLAKLFQMVSLIGISLPTFLIGILLIYLFSVTLGW
LPSFGRGDVVKLGWWSTGLLTLSGWKALIMPSITLGLFQMTLIMRLVRAEMLEVLRTDYIRFARARGLTTRAIHFGHALR
NTLVPVITVVGLQFGSVIAFSIITEQVFQWPGMGLLFVQAVQNVDIPIMAAYLMMVSLIFVTINLVVDILYTVVDPRLRA
TISRPA

Sequences:

>Translated_326_residues
MLAFTLRRAIQAIGVMIAVGIIAFAMFRFAGDPVSQLVPIDASAAERAQIRQSLGLDDPFIVQFGRYLFDAAQFKFGVSY
QFRQPVSDLLKERMPATLELAVCATILALVFGIIMGVFSALRRDSLLAKLFQMVSLIGISLPTFLIGILLIYLFSVTLGW
LPSFGRGDVVKLGWWSTGLLTLSGWKALIMPSITLGLFQMTLIMRLVRAEMLEVLRTDYIRFARARGLTTRAIHFGHALR
NTLVPVITVVGLQFGSVIAFSIITEQVFQWPGMGLLFVQAVQNVDIPIMAAYLMMVSLIFVTINLVVDILYTVVDPRLRA
TISRPA
>Mature_326_residues
MLAFTLRRAIQAIGVMIAVGIIAFAMFRFAGDPVSQLVPIDASAAERAQIRQSLGLDDPFIVQFGRYLFDAAQFKFGVSY
QFRQPVSDLLKERMPATLELAVCATILALVFGIIMGVFSALRRDSLLAKLFQMVSLIGISLPTFLIGILLIYLFSVTLGW
LPSFGRGDVVKLGWWSTGLLTLSGWKALIMPSITLGLFQMTLIMRLVRAEMLEVLRTDYIRFARARGLTTRAIHFGHALR
NTLVPVITVVGLQFGSVIAFSIITEQVFQWPGMGLLFVQAVQNVDIPIMAAYLMMVSLIFVTINLVVDILYTVVDPRLRA
TISRPA

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=320, Percent_Identity=36.875, Blast_Score=221, Evalue=7e-59,
Organism=Escherichia coli, GI1789888, Length=326, Percent_Identity=35.5828220858896, Blast_Score=208, Evalue=5e-55,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=37.9821958456973, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1787497, Length=323, Percent_Identity=32.5077399380805, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1787761, Length=318, Percent_Identity=38.9937106918239, Blast_Score=158, Evalue=6e-40,
Organism=Escherichia coli, GI1787550, Length=259, Percent_Identity=33.976833976834, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1788504, Length=276, Percent_Identity=28.2608695652174, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36124; Mature: 36124

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFTLRRAIQAIGVMIAVGIIAFAMFRFAGDPVSQLVPIDASAAERAQIRQSLGLDDPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCCHH
IVQFGRYLFDAAQFKFGVSYQFRQPVSDLLKERMPATLELAVCATILALVFGIIMGVFSA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRRDSLLAKLFQMVSLIGISLPTFLIGILLIYLFSVTLGWLPSFGRGDVVKLGWWSTGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCE
TLSGWKALIMPSITLGLFQMTLIMRLVRAEMLEVLRTDYIRFARARGLTTRAIHFGHALR
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NTLVPVITVVGLQFGSVIAFSIITEQVFQWPGMGLLFVQAVQNVDIPIMAAYLMMVSLIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
VTINLVVDILYTVVDPRLRATISRPA
HHHHHHHHHHHHHHCHHHHHHCCCCC
>Mature Secondary Structure
MLAFTLRRAIQAIGVMIAVGIIAFAMFRFAGDPVSQLVPIDASAAERAQIRQSLGLDDPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCCHH
IVQFGRYLFDAAQFKFGVSYQFRQPVSDLLKERMPATLELAVCATILALVFGIIMGVFSA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRRDSLLAKLFQMVSLIGISLPTFLIGILLIYLFSVTLGWLPSFGRGDVVKLGWWSTGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCE
TLSGWKALIMPSITLGLFQMTLIMRLVRAEMLEVLRTDYIRFARARGLTTRAIHFGHALR
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NTLVPVITVVGLQFGSVIAFSIITEQVFQWPGMGLLFVQAVQNVDIPIMAAYLMMVSLIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
VTINLVVDILYTVVDPRLRATISRPA
HHHHHHHHHHHHHHCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]