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The map label for this gene is dppC [H]

Identifier: 146339520

GI number: 146339520

Start: 2683606

End: 2684574

Strand: Reverse

Name: dppC [H]

Synonym: BRADO2510

Alternate gene names: 146339520

Gene position: 2684574-2683606 (Counterclockwise)

Preceding gene: 146339521

Following gene: 146339519

Centisome position: 36.0

GC content: 66.25

Gene sequence:

>969_bases
ATGAGCGACGCAGCCCTCCCCCATCCCACTCCCGTTCAAGCGCCGCGCGCCACCAGCGACGGCTGGCTGAAGCGCGCGCT
CGCGAGCGACCTGTTCTACTCGTTCCGCCGGTCCAAGCTGACGGTGGCCGCCGCGATCATCACGCTGCTGTTCTTCCTTC
TCGCGATCTTCGCGCCGCTGCTGTCGCCGCAGAACCCGTTCGATCCGGCGCAGCTGCAGCTTCTGAACTCGCGCATCTCC
CCGCTGTGGACCGCCGACGGCCAGAGCCCGTTCCTGCTCGGCACCGACGAGCAGGGCCGCGACGTGCTCTCCGCCATCCT
CTACGGCCTGCGGATCTCACTCCTCGTCGGCATTCTGGGCGTCGTGTTCTCCGGCGCGCTCGGCATCGGGCTCGGCTTGG
TCGCGGGCTATTTCGGCGGTCGTGTCGACACCGTGATCATGCGCATCGCCGACGTGCAGCTGACCTTCCCGCCGATCCTG
ATCGCGCTGCTGGTCAACGGCATCGCCAAGTCCGTCTCCGGCAATCATTTGGACTGGCTGAGCATGCTGGGCGTGCTGGT
GCTCGCGATCGGCCTGTCGTTCTGGGTGCAATATGCGCGGACGGTGCGCAGTTCGGTGCTGGTCGAGAAGAACAAGGACT
ATGTCGCCGCCGCGCAGCTGATCGGCCTGCCGGCGCCTGTCATCATGCTGCGCCACGTGCTGCCCAACACCACCGGTCCG
GTGCTGGTCATCGCGACGATCAACCTGGCCCTCGCCATCATCACCGAGGCGACCTTGTCGTTCCTCGGCTCCGGCATGCC
GGAGACGATGCCCTCGCTCGGAACCCTGATCCGCATCGGCAACAACTATCTGTTCGCGGGCGAATGGTGGATCGTCGCTT
TCCCCGGACTCGCGCTGGCCGGATTGATCCTGGCGATCAACCTGCTCGGCGACTGGCTGCGCGACGCGCTCAACCCGAAA
CTGCGATGA

Upstream 100 bases:

>100_bases
TGGTGTCGCTGATCTTCGTCACCATCAATCTCGTGGTTGATATCCTCTACACCGTGGTCGATCCGCGCCTGCGCGCGACC
ATCAGCCGTCCGGCCTGATC

Downstream 100 bases:

>100_bases
TCCCGTTCATTCGTATGAAGGCTTTGACCCCGAAGGCTTGGACCTCATGACCGCCCCCGTTCTGTCCGTGAGCAATCTGC
AGGTCGAGTTCGAGACACGG

Product: putative oligopeptide ABC transporter permease

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSDAALPHPTPVQAPRATSDGWLKRALASDLFYSFRRSKLTVAAAIITLLFFLLAIFAPLLSPQNPFDPAQLQLLNSRIS
PLWTADGQSPFLLGTDEQGRDVLSAILYGLRISLLVGILGVVFSGALGIGLGLVAGYFGGRVDTVIMRIADVQLTFPPIL
IALLVNGIAKSVSGNHLDWLSMLGVLVLAIGLSFWVQYARTVRSSVLVEKNKDYVAAAQLIGLPAPVIMLRHVLPNTTGP
VLVIATINLALAIITEATLSFLGSGMPETMPSLGTLIRIGNNYLFAGEWWIVAFPGLALAGLILAINLLGDWLRDALNPK
LR

Sequences:

>Translated_322_residues
MSDAALPHPTPVQAPRATSDGWLKRALASDLFYSFRRSKLTVAAAIITLLFFLLAIFAPLLSPQNPFDPAQLQLLNSRIS
PLWTADGQSPFLLGTDEQGRDVLSAILYGLRISLLVGILGVVFSGALGIGLGLVAGYFGGRVDTVIMRIADVQLTFPPIL
IALLVNGIAKSVSGNHLDWLSMLGVLVLAIGLSFWVQYARTVRSSVLVEKNKDYVAAAQLIGLPAPVIMLRHVLPNTTGP
VLVIATINLALAIITEATLSFLGSGMPETMPSLGTLIRIGNNYLFAGEWWIVAFPGLALAGLILAINLLGDWLRDALNPK
LR
>Mature_321_residues
SDAALPHPTPVQAPRATSDGWLKRALASDLFYSFRRSKLTVAAAIITLLFFLLAIFAPLLSPQNPFDPAQLQLLNSRISP
LWTADGQSPFLLGTDEQGRDVLSAILYGLRISLLVGILGVVFSGALGIGLGLVAGYFGGRVDTVIMRIADVQLTFPPILI
ALLVNGIAKSVSGNHLDWLSMLGVLVLAIGLSFWVQYARTVRSSVLVEKNKDYVAAAQLIGLPAPVIMLRHVLPNTTGPV
LVIATINLALAIITEATLSFLGSGMPETMPSLGTLIRIGNNYLFAGEWWIVAFPGLALAGLILAINLLGDWLRDALNPKL
R

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=297, Percent_Identity=40.7407407407407, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787054, Length=298, Percent_Identity=34.2281879194631, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1787760, Length=292, Percent_Identity=32.5342465753425, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1787498, Length=299, Percent_Identity=34.1137123745819, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1789889, Length=256, Percent_Identity=32.8125, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1788505, Length=229, Percent_Identity=36.6812227074236, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1787549, Length=252, Percent_Identity=30.952380952381, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34467; Mature: 34336

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAALPHPTPVQAPRATSDGWLKRALASDLFYSFRRSKLTVAAAIITLLFFLLAIFAPL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSPQNPFDPAQLQLLNSRISPLWTADGQSPFLLGTDEQGRDVLSAILYGLRISLLVGILG
CCCCCCCCHHHHHHHHHCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VVFSGALGIGLGLVAGYFGGRVDTVIMRIADVQLTFPPILIALLVNGIAKSVSGNHLDWL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
SMLGVLVLAIGLSFWVQYARTVRSSVLVEKNKDYVAAAQLIGLPAPVIMLRHVLPNTTGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
VLVIATINLALAIITEATLSFLGSGMPETMPSLGTLIRIGNNYLFAGEWWIVAFPGLALA
EEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCEEEEECCHHHHH
GLILAINLLGDWLRDALNPKLR
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDAALPHPTPVQAPRATSDGWLKRALASDLFYSFRRSKLTVAAAIITLLFFLLAIFAPL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSPQNPFDPAQLQLLNSRISPLWTADGQSPFLLGTDEQGRDVLSAILYGLRISLLVGILG
CCCCCCCCHHHHHHHHHCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VVFSGALGIGLGLVAGYFGGRVDTVIMRIADVQLTFPPILIALLVNGIAKSVSGNHLDWL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
SMLGVLVLAIGLSFWVQYARTVRSSVLVEKNKDYVAAAQLIGLPAPVIMLRHVLPNTTGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
VLVIATINLALAIITEATLSFLGSGMPETMPSLGTLIRIGNNYLFAGEWWIVAFPGLALA
EEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCEEEEECCHHHHH
GLILAINLLGDWLRDALNPKLR
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]