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The map label for this gene is yoaB [C]

Identifier: 146339327

GI number: 146339327

Start: 2457336

End: 2457686

Strand: Reverse

Name: yoaB [C]

Synonym: BRADO2306

Alternate gene names: 146339327

Gene position: 2457686-2457336 (Counterclockwise)

Preceding gene: 146339334

Following gene: 146339317

Centisome position: 32.96

GC content: 63.82

Gene sequence:

>351_bases
ATGTCCATCCAGCGTTTCGAAGTCGGCCCGCGCATGAGCCAGGTCGTCGTTCACGGCAATACCGTCTATCTCGCAGGCGT
CGTCGCGCAGAAGACCGCCGGCGAAAGCGTGACCAAGCAGACCGAGGAGATCCTCTCCATCATCGATGGTCACCTGGCGA
AGGCCGGCACCGACAAGACCAAGCTGTTGTCCGCGACGATCTACCTCACCGACATCAAGACTTTCGGCGAGATGAACGCG
GTGTGGGACGGCTGGGTGTCGGCCGGCAACACGCCTGCCCGCGCCACCGTCGAGGCCGGCCTCGCGGCGCCGCAATACAC
GGTCGAGATCATGGTGATCGCGGCGAAGTGA

Upstream 100 bases:

>100_bases
CATTCGCCGTCCCCGCCGCCCCTGCTTCAGCCGACTGGCGCTGCCGCGTCGCACGCGCTAGGGAAAGGCCCCGAATTGAC
CCTCTGAGGAGTTTCTCTCG

Downstream 100 bases:

>100_bases
GCCGCATGGCCGTCGCGACGCTATTTGGTGTCGCGGCGGCCGGTGTTGCGATTGAGCGGATCACGCCGCTCGCGCGTGAG
GCCTTCGGGCAGCACCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSIQRFEVGPRMSQVVVHGNTVYLAGVVAQKTAGESVTKQTEEILSIIDGHLAKAGTDKTKLLSATIYLTDIKTFGEMNA
VWDGWVSAGNTPARATVEAGLAAPQYTVEIMVIAAK

Sequences:

>Translated_116_residues
MSIQRFEVGPRMSQVVVHGNTVYLAGVVAQKTAGESVTKQTEEILSIIDGHLAKAGTDKTKLLSATIYLTDIKTFGEMNA
VWDGWVSAGNTPARATVEAGLAAPQYTVEIMVIAAK
>Mature_115_residues
SIQRFEVGPRMSQVVVHGNTVYLAGVVAQKTAGESVTKQTEEILSIIDGHLAKAGTDKTKLLSATIYLTDIKTFGEMNAV
WDGWVSAGNTPARATVEAGLAAPQYTVEIMVIAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=115, Percent_Identity=45.2173913043478, Blast_Score=102, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12336; Mature: 12205

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQRFEVGPRMSQVVVHGNTVYLAGVVAQKTAGESVTKQTEEILSIIDGHLAKAGTDKT
CCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
KLLSATIYLTDIKTFGEMNAVWDGWVSAGNTPARATVEAGLAAPQYTVEIMVIAAK
EEEEEEEEEEECCCCCCCCCHHCCHHCCCCCCCCEEEECCCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
SIQRFEVGPRMSQVVVHGNTVYLAGVVAQKTAGESVTKQTEEILSIIDGHLAKAGTDKT
CCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
KLLSATIYLTDIKTFGEMNAVWDGWVSAGNTPARATVEAGLAAPQYTVEIMVIAAK
EEEEEEEEEEECCCCCCCCCHHCCHHCCCCCCCCEEEECCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]