Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146339318

Identifier: 146339318

GI number: 146339318

Start: 2445748

End: 2446887

Strand: Direct

Name: 146339318

Synonym: BRADO2297

Alternate gene names: NA

Gene position: 2445748-2446887 (Clockwise)

Preceding gene: 146339315

Following gene: 146339319

Centisome position: 32.8

GC content: 63.95

Gene sequence:

>1140_bases
ATGCGGTTGTGGGTTCAGGTGCACACGTGGACTTCGCTGATCAGCATGATGTTCATGCTGATGTTGTGTCTGACCGGGCT
GCCGCTGATCTTCCATGACGAGATCAACCATCTCCTCGAAGACGACATCCCTGCGCCGGCAATGCCGGCGGATACGCCGG
TCTTGCCGCTCGACCGCCTGATCGCCTCTGCCAGGCAACTGCAGCCGAAGCAGCATGTGCTGTTCGTCAGCCTCAAGGCG
GCCGAGCCGCTTGTCGTGGTCGCGATGTCGCCGACCGCGGTCCCGATGCCGGGACAGCTGCACCGGCTCACAGTCGATGC
CCGCAGCGGCGCCATCCTCGGTGACGAGGCGCCGCACCAGGACGTCATGGACATGATCCTGCGCATCCACCGCGACATGT
TCGCTGGATTGCCGGGCGAGCTCTTTCTGGGCCTGATGGGACTCGTCTTCGCAGCCTCGATCGTATCCGGCGTCGTGGTC
TACTGGCCGTTCATGCGACGGCTGCAGTTCGGAACGGTGCGGGATCGCTCGCGACGTCTCAAATGGCTCGACCTGCACAA
TCTGCTCGGCATCGTCACGGTAAGCTGGACCCTTGCGGTCGGGGTGACCGGGACGATCAACACGCTCGCCGTGCCGCTGT
CGGAACTCTGGCGCGCCCAGACGATGCCGGCCCTGCTCGGGCCCCATCAGGGCAAGCCGCTCGCCGAGGCAAAATCGGTT
CAAGCCGCGGTCGATGCGGTCCGCACCGCCTATCCGGATCGCGTCGTCGCATCGGTGACGATGCCGACCGCGACGCGGTT
CGGCAGTCCTCAGCACCTCATCGTCTGGACGAAGGGCACGACGCCTTTCACGGCGCGCATGTACACGCCTGTTCTGGTTG
ATGCCCAAGAAATTCACGACCAGGACAGCGCCAAGCTGATTGCGCCGGCCTTGGCCTGGTACCTGCGTGCGCTGCAGGTC
TCGCGGCCGCTGCATTTCGGCGATTATGGCGGGCTGCCGCTGAAGATCATCTGGGCCTTGCTCGATATCATCACCATCAT
CGTACTCTGCAGCGGTCTTTATCTTTGGGTCGCAAAGCGCTGGGGCACCAGACGCAAGTCGTCGAGCGTTGCGGTCGCGG
CGGCAGCGGTGTCGTCATGA

Upstream 100 bases:

>100_bases
GGACGACCTGAAAATTCGGACGTCGCGATGTCAACGACGAGCGCAACGGTCGGGCGAGGGCGCCTCGGCGCGATGGTGAA
CCAGGGTGGGTCCATAGGTC

Downstream 100 bases:

>100_bases
GCTCACTCGCGGCGCCACCGTCGCGCTCCGCGCAACGGTCGACATGGCAAGTGTTTCGAGCGCCGCTGCTGACGGGGCTT
GTCGCGGCGGCCGGACTTGC

Product: putative iron-regulated membrane protein

Products: NA

Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Family; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix; Pepsy-Associated Tm Helix Domain Protein

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MRLWVQVHTWTSLISMMFMLMLCLTGLPLIFHDEINHLLEDDIPAPAMPADTPVLPLDRLIASARQLQPKQHVLFVSLKA
AEPLVVVAMSPTAVPMPGQLHRLTVDARSGAILGDEAPHQDVMDMILRIHRDMFAGLPGELFLGLMGLVFAASIVSGVVV
YWPFMRRLQFGTVRDRSRRLKWLDLHNLLGIVTVSWTLAVGVTGTINTLAVPLSELWRAQTMPALLGPHQGKPLAEAKSV
QAAVDAVRTAYPDRVVASVTMPTATRFGSPQHLIVWTKGTTPFTARMYTPVLVDAQEIHDQDSAKLIAPALAWYLRALQV
SRPLHFGDYGGLPLKIIWALLDIITIIVLCSGLYLWVAKRWGTRRKSSSVAVAAAAVSS

Sequences:

>Translated_379_residues
MRLWVQVHTWTSLISMMFMLMLCLTGLPLIFHDEINHLLEDDIPAPAMPADTPVLPLDRLIASARQLQPKQHVLFVSLKA
AEPLVVVAMSPTAVPMPGQLHRLTVDARSGAILGDEAPHQDVMDMILRIHRDMFAGLPGELFLGLMGLVFAASIVSGVVV
YWPFMRRLQFGTVRDRSRRLKWLDLHNLLGIVTVSWTLAVGVTGTINTLAVPLSELWRAQTMPALLGPHQGKPLAEAKSV
QAAVDAVRTAYPDRVVASVTMPTATRFGSPQHLIVWTKGTTPFTARMYTPVLVDAQEIHDQDSAKLIAPALAWYLRALQV
SRPLHFGDYGGLPLKIIWALLDIITIIVLCSGLYLWVAKRWGTRRKSSSVAVAAAAVSS
>Mature_379_residues
MRLWVQVHTWTSLISMMFMLMLCLTGLPLIFHDEINHLLEDDIPAPAMPADTPVLPLDRLIASARQLQPKQHVLFVSLKA
AEPLVVVAMSPTAVPMPGQLHRLTVDARSGAILGDEAPHQDVMDMILRIHRDMFAGLPGELFLGLMGLVFAASIVSGVVV
YWPFMRRLQFGTVRDRSRRLKWLDLHNLLGIVTVSWTLAVGVTGTINTLAVPLSELWRAQTMPALLGPHQGKPLAEAKSV
QAAVDAVRTAYPDRVVASVTMPTATRFGSPQHLIVWTKGTTPFTARMYTPVLVDAQEIHDQDSAKLIAPALAWYLRALQV
SRPLHFGDYGGLPLKIIWALLDIITIIVLCSGLYLWVAKRWGTRRKSSSVAVAAAAVSS

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41698; Mature: 41698

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLWVQVHTWTSLISMMFMLMLCLTGLPLIFHDEINHLLEDDIPAPAMPADTPVLPLDRL
CEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
IASARQLQPKQHVLFVSLKAAEPLVVVAMSPTAVPMPGQLHRLTVDARSGAILGDEAPHQ
HHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCHH
DVMDMILRIHRDMFAGLPGELFLGLMGLVFAASIVSGVVVYWPFMRRLQFGTVRDRSRRL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
KWLDLHNLLGIVTVSWTLAVGVTGTINTLAVPLSELWRAQTMPALLGPHQGKPLAEAKSV
HHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHH
QAAVDAVRTAYPDRVVASVTMPTATRFGSPQHLIVWTKGTTPFTARMYTPVLVDAQEIHD
HHHHHHHHHCCCCCEEEEEECCHHHHCCCCCEEEEEECCCCCEEHEECCCCEEEHHHHCC
QDSAKLIAPALAWYLRALQVSRPLHFGDYGGLPLKIIWALLDIITIIVLCSGLYLWVAKR
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGTRRKSSSVAVAAAAVSS
HCCCCCCCCCEEEHHHHCC
>Mature Secondary Structure
MRLWVQVHTWTSLISMMFMLMLCLTGLPLIFHDEINHLLEDDIPAPAMPADTPVLPLDRL
CEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
IASARQLQPKQHVLFVSLKAAEPLVVVAMSPTAVPMPGQLHRLTVDARSGAILGDEAPHQ
HHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCHH
DVMDMILRIHRDMFAGLPGELFLGLMGLVFAASIVSGVVVYWPFMRRLQFGTVRDRSRRL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
KWLDLHNLLGIVTVSWTLAVGVTGTINTLAVPLSELWRAQTMPALLGPHQGKPLAEAKSV
HHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHH
QAAVDAVRTAYPDRVVASVTMPTATRFGSPQHLIVWTKGTTPFTARMYTPVLVDAQEIHD
HHHHHHHHHCCCCCEEEEEECCHHHHCCCCCEEEEEECCCCCEEHEECCCCEEEHHHHCC
QDSAKLIAPALAWYLRALQVSRPLHFGDYGGLPLKIIWALLDIITIIVLCSGLYLWVAKR
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGTRRKSSSVAVAAAAVSS
HCCCCCCCCCEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA