Click here to switch to the map view.

The map label for this gene is 146339254

Identifier: 146339254

GI number: 146339254

Start: 2370564

End: 2372258

Strand: Direct

Name: 146339254

Synonym: BRADO2225

Alternate gene names: NA

Gene position: 2370564-2372258 (Clockwise)

Preceding gene: 146339252

Following gene: 146339255

Centisome position: 31.79

GC content: 61.06

Gene sequence:

>1695_bases
GTGCTGTCCGTACTCCTGCTGAGCGTGGCGCACGGGCCGCTCCTGGCCAACACCGACGGCGATACCGGCAAGACGCCTTC
GGCGGACAAGCCTGCGACAAAGAAACTGAAGCCGAAGCAGAACCCGGGCGACGGAGCAAGAGCCGACAAGGGGACGGCTA
CAAAGCCGAGCCCACGCTTCGATATCGACGAATATCGCGTCGAGGGGGCTGACAGGCTGCCGCAGATCGATGTCGAAGCT
GCGGTTTATCCGTTCCTCGGTCCGGGGCGATCGGCCGAAGATGTCGAGAAGGCCCGTGCGGCGTTGGAGAAGGCCTATCA
TGATCGCGGTCTGCAGACCGTCGGCGTTTCCATACCGGAGCAGGATGCGACGCGTGGCTTCGTCGTGCTCAAGGTCGCCG
AGAACAAAGTCGGCCGTCTACGCGTGAAGGGCTCGCGCTACTTCGATCTTGCCAAGATCAAGGAGAGTGCGCCGTCGCTC
AAGGAAGGCACGGTGCCCGACTTCAAGGCCGTCACCAGGGATATCGTCAGTCTCAATCAATGGCCGGACCGTCGAGTCAC
GCCGGCGCTGCGCGCGGGCGTCACGCCCGGCACCGTCGACGTCGATTTGAACGTCGAGGACACCTATCCGCTGCACGGCA
GCTACGAGATCAACAATCGGCAGAGCCCGAGCACATCGGCGCTGCGCTCCAGCATCGTGCTTCACTACGACAATTTTTGG
CAAAGGGGCGATTCCGCCAATGTGAGCTACCAGGAGGCCTCTCTCAATCGAAAGGACGCCATGGTGGTCTCCGGCTCGTA
TCTCGCGCGAACGGACCGCGACTGGCTCAATGTCCTGTTATATGGGGTGAAGTCCTGGAGTTCGGTCGCGACCGTCGGCG
GAGCCAATGTGATCGGTCCCGGCCAGGTGATTGGCGCCCGTGCCGTGATTACGCTTCCGGCCAAGGGCGATCTCGTGCAC
AACATCTCGCTCGGTGCCGACTACAAGAACTTCGCGCAGACGCTGTCGCTCGCTGGCGGCTCTTTTAGCTCGCCTGTGAA
CTACGTGCCAATGGTGGCGAGCTACGGAGCGACTTGGAAGATCGAGAATGCGCTGACCCAGCTCAACGTGGCGATCACCG
GCGGCACCCGCGGGATCGGCAGCTCTCTCCAGGAGTTCGATGCCAAGCGTTTCAATGCAACCCCCAGCTTCATTCATCTG
AAGGCGGATCTGTCGCACACCCAGGACCTGCCGGGCGGCATGCAGCTGTTCGCAAAGGTGCAGGGGCAGATCGCCGATCA
GCCACTGGTGTCGAGCGAACAGTTCAGCCTCGGCGGACAGGATACGGTCCGCGGCTATCTCGAATCGGAAGCCCTCGGCG
ATTACGGTACGGCTGGCACGCTGGAGATTCGCTCGCCGGACGTCACGCCCTATTTCCAGCAGAAGCTGGAGAATCCGATG
GGCGCTCCGATCAATTTCAATCTCTTCAACGATTGGCGTTTCTATGTCTTCGCCGACGCTGGCCGTGCGAAGATCATTGA
TCCGCTGCCCGACCAGCAATCGCGTTTCGATCTCGCCAGCTATGGTGTCGGTACGCGCGTGAGGATGCTCAATCACTTCA
ACGGAGTGTTCCTGATCGGAGTGCCGCTGATCAATCAGCAGGCCACGATCGTCAATCATCCGCGCTTCAGCTTTCGTTTC
TGGGGAGAGTTCTAG

Upstream 100 bases:

>100_bases
GATGCATCGTGTTAATCGTACCATTCCGCGTCCGGCGTGCCGTCCAGTGCCCGCGCACCGCCGTTGCGTCCTGTCGTGGT
CTCAGCTCAGACGTGCGTCG

Downstream 100 bases:

>100_bases
ATGACGCGCGTCAACGCCCGTCCGCGCCGCTCGCTGACCTGGAGTGGTCAGGCGATGTTGCTGATTGCACTCCTGATCAC
GTTGTGGCCGGGCAGCGCCT

Product: putative signal peptide;putative hemolysin activation/secretion protein

Products: NA

Alternate protein names: Polypeptide-Transport-Associated Domain-Containing Protein; Surface Antigen D; Surface Antigen; Polypeptide-Transport-Associated Domain Protein ShlB-Type; Outer Membrane Protein; Exported Surface Antigen Protein; Hemolysin Activator HlyB Domain-Containing Protein; Signal Peptide; Heme/Hemopexin Utilization Protein HuxB; POTRA Domain ShlB-Type Family; Hemolysin Activation/Secretion Signal Peptide Protein; OMP85 Family Outer Membrane Protein

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MLSVLLLSVAHGPLLANTDGDTGKTPSADKPATKKLKPKQNPGDGARADKGTATKPSPRFDIDEYRVEGADRLPQIDVEA
AVYPFLGPGRSAEDVEKARAALEKAYHDRGLQTVGVSIPEQDATRGFVVLKVAENKVGRLRVKGSRYFDLAKIKESAPSL
KEGTVPDFKAVTRDIVSLNQWPDRRVTPALRAGVTPGTVDVDLNVEDTYPLHGSYEINNRQSPSTSALRSSIVLHYDNFW
QRGDSANVSYQEASLNRKDAMVVSGSYLARTDRDWLNVLLYGVKSWSSVATVGGANVIGPGQVIGARAVITLPAKGDLVH
NISLGADYKNFAQTLSLAGGSFSSPVNYVPMVASYGATWKIENALTQLNVAITGGTRGIGSSLQEFDAKRFNATPSFIHL
KADLSHTQDLPGGMQLFAKVQGQIADQPLVSSEQFSLGGQDTVRGYLESEALGDYGTAGTLEIRSPDVTPYFQQKLENPM
GAPINFNLFNDWRFYVFADAGRAKIIDPLPDQQSRFDLASYGVGTRVRMLNHFNGVFLIGVPLINQQATIVNHPRFSFRF
WGEF

Sequences:

>Translated_564_residues
MLSVLLLSVAHGPLLANTDGDTGKTPSADKPATKKLKPKQNPGDGARADKGTATKPSPRFDIDEYRVEGADRLPQIDVEA
AVYPFLGPGRSAEDVEKARAALEKAYHDRGLQTVGVSIPEQDATRGFVVLKVAENKVGRLRVKGSRYFDLAKIKESAPSL
KEGTVPDFKAVTRDIVSLNQWPDRRVTPALRAGVTPGTVDVDLNVEDTYPLHGSYEINNRQSPSTSALRSSIVLHYDNFW
QRGDSANVSYQEASLNRKDAMVVSGSYLARTDRDWLNVLLYGVKSWSSVATVGGANVIGPGQVIGARAVITLPAKGDLVH
NISLGADYKNFAQTLSLAGGSFSSPVNYVPMVASYGATWKIENALTQLNVAITGGTRGIGSSLQEFDAKRFNATPSFIHL
KADLSHTQDLPGGMQLFAKVQGQIADQPLVSSEQFSLGGQDTVRGYLESEALGDYGTAGTLEIRSPDVTPYFQQKLENPM
GAPINFNLFNDWRFYVFADAGRAKIIDPLPDQQSRFDLASYGVGTRVRMLNHFNGVFLIGVPLINQQATIVNHPRFSFRF
WGEF
>Mature_564_residues
MLSVLLLSVAHGPLLANTDGDTGKTPSADKPATKKLKPKQNPGDGARADKGTATKPSPRFDIDEYRVEGADRLPQIDVEA
AVYPFLGPGRSAEDVEKARAALEKAYHDRGLQTVGVSIPEQDATRGFVVLKVAENKVGRLRVKGSRYFDLAKIKESAPSL
KEGTVPDFKAVTRDIVSLNQWPDRRVTPALRAGVTPGTVDVDLNVEDTYPLHGSYEINNRQSPSTSALRSSIVLHYDNFW
QRGDSANVSYQEASLNRKDAMVVSGSYLARTDRDWLNVLLYGVKSWSSVATVGGANVIGPGQVIGARAVITLPAKGDLVH
NISLGADYKNFAQTLSLAGGSFSSPVNYVPMVASYGATWKIENALTQLNVAITGGTRGIGSSLQEFDAKRFNATPSFIHL
KADLSHTQDLPGGMQLFAKVQGQIADQPLVSSEQFSLGGQDTVRGYLESEALGDYGTAGTLEIRSPDVTPYFQQKLENPM
GAPINFNLFNDWRFYVFADAGRAKIIDPLPDQQSRFDLASYGVGTRVRMLNHFNGVFLIGVPLINQQATIVNHPRFSFRF
WGEF

Specific function: Unknown

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61352; Mature: 61352

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVLLLSVAHGPLLANTDGDTGKTPSADKPATKKLKPKQNPGDGARADKGTATKPSPRF
CHHEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DIDEYRVEGADRLPQIDVEAAVYPFLGPGRSAEDVEKARAALEKAYHDRGLQTVGVSIPE
CCHHHEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCC
QDATRGFVVLKVAENKVGRLRVKGSRYFDLAKIKESAPSLKEGTVPDFKAVTRDIVSLNQ
CCCCCCEEEEEEECCCCCEEEECCCCEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
WPDRRVTPALRAGVTPGTVDVDLNVEDTYPLHGSYEINNRQSPSTSALRSSIVLHYDNFW
CCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHEEEEEECHHH
QRGDSANVSYQEASLNRKDAMVVSGSYLARTDRDWLNVLLYGVKSWSSVATVGGANVIGP
HCCCCCCCEEHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCC
GQVIGARAVITLPAKGDLVHNISLGADYKNFAQTLSLAGGSFSSPVNYVPMVASYGATWK
CCEECCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEE
IENALTQLNVAITGGTRGIGSSLQEFDAKRFNATPSFIHLKADLSHTQDLPGGMQLFAKV
ECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
QGQIADQPLVSSEQFSLGGQDTVRGYLESEALGDYGTAGTLEIRSPDVTPYFQQKLENPM
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCC
GAPINFNLFNDWRFYVFADAGRAKIIDPLPDQQSRFDLASYGVGTRVRMLNHFNGVFLIG
CCCEEEEEECCEEEEEEECCCCCEEECCCCCCHHCCCHHHCCCCHHHHHHHHCCCEEEEE
VPLINQQATIVNHPRFSFRFWGEF
EEEECCCEEEEECCCEEEEECCCC
>Mature Secondary Structure
MLSVLLLSVAHGPLLANTDGDTGKTPSADKPATKKLKPKQNPGDGARADKGTATKPSPRF
CHHEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DIDEYRVEGADRLPQIDVEAAVYPFLGPGRSAEDVEKARAALEKAYHDRGLQTVGVSIPE
CCHHHEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCC
QDATRGFVVLKVAENKVGRLRVKGSRYFDLAKIKESAPSLKEGTVPDFKAVTRDIVSLNQ
CCCCCCEEEEEEECCCCCEEEECCCCEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
WPDRRVTPALRAGVTPGTVDVDLNVEDTYPLHGSYEINNRQSPSTSALRSSIVLHYDNFW
CCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHEEEEEECHHH
QRGDSANVSYQEASLNRKDAMVVSGSYLARTDRDWLNVLLYGVKSWSSVATVGGANVIGP
HCCCCCCCEEHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCC
GQVIGARAVITLPAKGDLVHNISLGADYKNFAQTLSLAGGSFSSPVNYVPMVASYGATWK
CCEECCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEE
IENALTQLNVAITGGTRGIGSSLQEFDAKRFNATPSFIHLKADLSHTQDLPGGMQLFAKV
ECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
QGQIADQPLVSSEQFSLGGQDTVRGYLESEALGDYGTAGTLEIRSPDVTPYFQQKLENPM
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCC
GAPINFNLFNDWRFYVFADAGRAKIIDPLPDQQSRFDLASYGVGTRVRMLNHFNGVFLIG
CCCEEEEEECCEEEEEEECCCCCEEECCCCCCHHCCCHHHCCCCHHHHHHHHCCCEEEEE
VPLINQQATIVNHPRFSFRFWGEF
EEEECCCEEEEECCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA