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The map label for this gene is rlpA [C]

Identifier: 146339197

GI number: 146339197

Start: 2292467

End: 2293039

Strand: Direct

Name: rlpA [C]

Synonym: BRADO2157

Alternate gene names: 146339197

Gene position: 2292467-2293039 (Clockwise)

Preceding gene: 146339196

Following gene: 146339205

Centisome position: 30.74

GC content: 69.46

Gene sequence:

>573_bases
ATGCGTATCATCGACCGGACAGAACGTCCCGGGCAGCGCGAAGCTCTGATGGTGGTGGGGCAGGGCGGCACCCGAGAGCT
CGCCAGCCGGATCCTGAGGCTCACGCTGGTGGGCGCGGCAGCCGCGACGGTCGCCGCCTGCGCGCAATCATCGGCGGTCC
GGCAGGCCCGTCTGACAACGCCCACGAGGCAGGCCGCCGTTGAATTCCGGTCCCAGCCGCAGCGTGTGGAGACGGCGTCG
GACTCTGTGGTCCGCGTCCGCCATGCCGAGCCCAGCCAGTCGCCGCTGCAGACGGCATCATCCGGTCTCGCCAGCTATTA
TTCCGAAGGACACAAGACCGCGAGCGGCGAGCGCTTCGATCCCTCCGAGCTGACGGCCGCGCATCGCAGCCTGCCGTTCG
GCACGCGCCTCCAGGTTACCAACGTCAGGACCGGCCGCTCCGTGGTGGTCCGCGTCAACGACCGCGGCCCATTCGTGCAG
GGCCGCGTGGTCGACGTCTCCTACTCCGCCGCCCAGGCGCTCGGCATGGTCAACACCGGCGTCGCGCCTGTGAAGGTCAG
CGTAGTACGGTAA

Upstream 100 bases:

>100_bases
CCAAAAACCAGGAGTTGCGGCGCGTCGAAATGCTCTTTGCCACCGTGCCGCCGCGATTGGGCCGCGACCATGAAGCGGTT
GAGGCGGAGGCGCACAGAAC

Downstream 100 bases:

>100_bases
CGCATCCGGCCTCCTCGTCCTTGCGAGCGCAGCGAAGCAATCCAGGGCCCAGCAACGACTCTCGATTGCTTCGCTGCGCT
CGCAAGGACTTGAATGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRIIDRTERPGQREALMVVGQGGTRELASRILRLTLVGAAAATVAACAQSSAVRQARLTTPTRQAAVEFRSQPQRVETAS
DSVVRVRHAEPSQSPLQTASSGLASYYSEGHKTASGERFDPSELTAAHRSLPFGTRLQVTNVRTGRSVVVRVNDRGPFVQ
GRVVDVSYSAAQALGMVNTGVAPVKVSVVR

Sequences:

>Translated_190_residues
MRIIDRTERPGQREALMVVGQGGTRELASRILRLTLVGAAAATVAACAQSSAVRQARLTTPTRQAAVEFRSQPQRVETAS
DSVVRVRHAEPSQSPLQTASSGLASYYSEGHKTASGERFDPSELTAAHRSLPFGTRLQVTNVRTGRSVVVRVNDRGPFVQ
GRVVDVSYSAAQALGMVNTGVAPVKVSVVR
>Mature_190_residues
MRIIDRTERPGQREALMVVGQGGTRELASRILRLTLVGAAAATVAACAQSSAVRQARLTTPTRQAAVEFRSQPQRVETAS
DSVVRVRHAEPSQSPLQTASSGLASYYSEGHKTASGERFDPSELTAAHRSLPFGTRLQVTNVRTGRSVVVRVNDRGPFVQ
GRVVDVSYSAAQALGMVNTGVAPVKVSVVR

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=90, Percent_Identity=44.4444444444444, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 20295; Mature: 20295

Theoretical pI: Translated: 11.85; Mature: 11.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIDRTERPGQREALMVVGQGGTRELASRILRLTLVGAAAATVAACAQSSAVRQARLTT
CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTRQAAVEFRSQPQRVETASDSVVRVRHAEPSQSPLQTASSGLASYYSEGHKTASGERFD
CHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PSELTAAHRSLPFGTRLQVTNVRTGRSVVVRVNDRGPFVQGRVVDVSYSAAQALGMVNTG
HHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHCCC
VAPVKVSVVR
CCEEEEEEEC
>Mature Secondary Structure
MRIIDRTERPGQREALMVVGQGGTRELASRILRLTLVGAAAATVAACAQSSAVRQARLTT
CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTRQAAVEFRSQPQRVETASDSVVRVRHAEPSQSPLQTASSGLASYYSEGHKTASGERFD
CHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PSELTAAHRSLPFGTRLQVTNVRTGRSVVVRVNDRGPFVQGRVVDVSYSAAQALGMVNTG
HHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHCCC
VAPVKVSVVR
CCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]