| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339196
Identifier: 146339196
GI number: 146339196
Start: 2291369
End: 2292148
Strand: Direct
Name: 146339196
Synonym: BRADO2156
Alternate gene names: NA
Gene position: 2291369-2292148 (Clockwise)
Preceding gene: 146339194
Following gene: 146339197
Centisome position: 30.73
GC content: 63.97
Gene sequence:
>780_bases GTGGCGGCGCCCAGGGCTCAGCCGGCGCAGCTGAGTGAAAAGGAGGCGTCCGTCGATGTCGAGCTCATCCTTGCCGTCGA CGTCTCCTACTCGATGGACCTGGACGAGCTCGCCATCCAGCGCGAGGGCTATGCCCAGGCGCTCAGCTCGCGGGAGTTCC TGCAGGCGCTGAAGAATGGCGTACACGGCCGCATCGCGGTGACCTATTTCGAATGGGCCGCGGCGAGCGATCAGAAGATC ATCATTCCCTGGCGCGTCATCGATGGACCGGAGAGCGCCGACGCGGTCGCCGCCGAGATTATGAAGACGCCGATCCGCCG CGCCTCGCGCACCTCGATCTCCGGCGCGATCTATTTCGCGATGCCGCTGTTCGACGAGAATCCCTATCGCGGGCTGCGCA AGGTGATCGACATCTCCGGCGACGGTCCCAACAACAACGGTCCCTCTCCGGTGACGATGGCCCGCGACGAAGCCGTCAAC AAGGGGATCACGATCAACGGCCTGCCGATCATGGTCAAGGAGCCGTCCTACTCGACCATGGATATTGAGAACCTCGACCT CTACTACAAGGATTGCGTCACCGGCGGCCGCGGTTCGTTCGTGGTCACGATCAAGAGCCGCGAAGAGTTCAAGGAGGCGA TCCGCACCAAGCTCCTGATGGAGGTCGCCGGACGCCAGCCGCCGCCCAGCATCGTTCCGGTGGCCGATGACGGCAACAAG GAGCCGCGGGTGTCCTGCCTGATCGGCGAGAAGATCTGGCAGGATCGGTGGGGACGGTAA
Upstream 100 bases:
>100_bases ATCTCGTCACGCGATTGGAGGGCAGCTGATGCGCTGGTGGATCTCGATCGGGGTGGCGTGCGTGGCGGGCGCTTTGGCGG GCGGCGATGTCGCCAGCGTC
Downstream 100 bases:
>100_bases CGTTCTGCCGTGCTGTCCGCTGCCGCAACTCGGGCGGTAAAGGTCGTTAGCGTTTCGCTCGTCGGTTCGAGCCGCTCCAT GACGGCCTCAGCGGAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein; Von Willebrand Factor Type A Domain Prot; Lipoprotein
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MAAPRAQPAQLSEKEASVDVELILAVDVSYSMDLDELAIQREGYAQALSSREFLQALKNGVHGRIAVTYFEWAAASDQKI IIPWRVIDGPESADAVAAEIMKTPIRRASRTSISGAIYFAMPLFDENPYRGLRKVIDISGDGPNNNGPSPVTMARDEAVN KGITINGLPIMVKEPSYSTMDIENLDLYYKDCVTGGRGSFVVTIKSREEFKEAIRTKLLMEVAGRQPPPSIVPVADDGNK EPRVSCLIGEKIWQDRWGR
Sequences:
>Translated_259_residues MAAPRAQPAQLSEKEASVDVELILAVDVSYSMDLDELAIQREGYAQALSSREFLQALKNGVHGRIAVTYFEWAAASDQKI IIPWRVIDGPESADAVAAEIMKTPIRRASRTSISGAIYFAMPLFDENPYRGLRKVIDISGDGPNNNGPSPVTMARDEAVN KGITINGLPIMVKEPSYSTMDIENLDLYYKDCVTGGRGSFVVTIKSREEFKEAIRTKLLMEVAGRQPPPSIVPVADDGNK EPRVSCLIGEKIWQDRWGR >Mature_258_residues AAPRAQPAQLSEKEASVDVELILAVDVSYSMDLDELAIQREGYAQALSSREFLQALKNGVHGRIAVTYFEWAAASDQKII IPWRVIDGPESADAVAAEIMKTPIRRASRTSISGAIYFAMPLFDENPYRGLRKVIDISGDGPNNNGPSPVTMARDEAVNK GITINGLPIMVKEPSYSTMDIENLDLYYKDCVTGGRGSFVVTIKSREEFKEAIRTKLLMEVAGRQPPPSIVPVADDGNKE PRVSCLIGEKIWQDRWGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28558; Mature: 28427
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPRAQPAQLSEKEASVDVELILAVDVSYSMDLDELAIQREGYAQALSSREFLQALKNG CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC VHGRIAVTYFEWAAASDQKIIIPWRVIDGPESADAVAAEIMKTPIRRASRTSISGAIYFA CCCEEEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE MPLFDENPYRGLRKVIDISGDGPNNNGPSPVTMARDEAVNKGITINGLPIMVKEPSYSTM EECCCCCHHHHHHHHEECCCCCCCCCCCCCEEEEHHHHHCCCEEECCEEEEEECCCCCEE DIENLDLYYKDCVTGGRGSFVVTIKSREEFKEAIRTKLLMEVAGRQPPPSIVPVADDGNK ECCCCCEEEHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC EPRVSCLIGEKIWQDRWGR CCEEEEEECHHHHHHCCCC >Mature Secondary Structure AAPRAQPAQLSEKEASVDVELILAVDVSYSMDLDELAIQREGYAQALSSREFLQALKNG CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC VHGRIAVTYFEWAAASDQKIIIPWRVIDGPESADAVAAEIMKTPIRRASRTSISGAIYFA CCCEEEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE MPLFDENPYRGLRKVIDISGDGPNNNGPSPVTMARDEAVNKGITINGLPIMVKEPSYSTM EECCCCCHHHHHHHHEECCCCCCCCCCCCCEEEEHHHHHCCCEEECCEEEEEECCCCCEE DIENLDLYYKDCVTGGRGSFVVTIKSREEFKEAIRTKLLMEVAGRQPPPSIVPVADDGNK ECCCCCEEEHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC EPRVSCLIGEKIWQDRWGR CCEEEEEECHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA