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The map label for this gene is glcD [H]

Identifier: 146339103

GI number: 146339103

Start: 2190827

End: 2192254

Strand: Reverse

Name: glcD [H]

Synonym: BRADO2057

Alternate gene names: 146339103

Gene position: 2192254-2190827 (Counterclockwise)

Preceding gene: 146339104

Following gene: 146339102

Centisome position: 29.4

GC content: 67.72

Gene sequence:

>1428_bases
ATGAACATCAGCCAGCCTGCCTTCCCGCCGCTGCCCCCCGAGCTGATCGCGCAGTTCGCCGCCATCGTCGGCGAGCGCCA
GGCGCTGACCGCGGAGAACGACGTCGCGCCCTACGTCACCGAGGAGCGCAATCTGTTCCACGGCCGCTCGCCGCTGGTGC
TGCGGCCGGGCTCGACCGCCGAGGTCGCCGCGATCTGCAAGCTCGCCAGCGCGCATCGCATCGCGCTGGTGCCGCAGGGC
GGCAACACCGGCCTCGTCGGCGGTCAGACGCCGCACAATGGCGAGGTCGTGGTGTCGCTGAAGCGCATGGACAGGATTCG
CGACGTCGACACCGCGTCCAACACGATGATCGCCGAGGCCGGCGTCGTGCTGCAGGTCGCGCAGCAGAAGGCCGCCGAGG
TGGACCGCCTGTTCCCGCTGTCGCTCGGCGCCGAGGGCAGCTGCACCATCGGCGGCAATCTCTCCACCAATGCCGGCGGC
ACCGCTGCGCTGGCCTACGGCGTCGCGCGTGAGATGGCGCTGGGCGTCGAGGTGGTGCTGGCCGACGGGCGGGTGCTGAA
TGCGCTGTCGAAATTGAAGAAGGACAACACCGGCTACGATTTGCGCAATCTGTTCATCGGCGCCGAGGGGACGCTCGGGA
TCATCACCGCGGCGAGCCTGAAGCTGTTCCCGAAGCCGCGCGCGATCGAGACCGCCTTCGTCGGGCTGAAGTCGCCGGAG
GATGCGCTCAAGCTGCTGTCGATCGCGCAACGCGAGGCCGCGGGCAGCCTCACCAGCTTCGAACTGATCGCCCAGATCGC
GCTCGCCTTCTCGATCCGCCATGTCTCCGGCAACCGCGCGCCGCTGTCCGGTCCGCATCCCTGGTTCGTGCTGATGGAAT
TGTCGTCGTCGCGCGACGACGCCCGGGCCACGCTGGAGACCATCCTCGAACAGGGTTTTGAGGCCAGCATCGTGGACGAC
GCCGTGATCGCCGAGAATCTCACCCAGCGCATGGCGTTCTGGAAATTGCGCGAGGACATTTCCTGGGCGCAGAAGCCGGA
GGGCGGCTCGATCAAGCACGACATCTCGGTGCCGGTGGCCGCGGTGCCGGCGTTCATCGCGGAAGCCAACGAGGCCGTCG
TCAGGAAAGTGCCCGGCGCACGCCCCGTTCCGTTCGGCCATCTCGGCGACGGCAACATCCACTACAATGTCAGCCAGCCG
ATCGGCGCCGACACCGCCGACTATCTCGCGCGTTGGCACGAGGTGAATTCGGTCGTGTTCGAGATCGTGCTGCGCATGGG
CGGATCGATCTCGGCCGAGCACGGCATCGGCGTGCTCAAGCGCGACGAGCTGCCCGACGTCAAGGACCCGACCGCGATCG
CGCTGATGCGCGCAATCAAGGCGCAGTTCGATCCGCTGGGGATCATGAACCCGGGCAAGGTGCTCTAG

Upstream 100 bases:

>100_bases
CATCGCCGTGATGCCGATTCCCAACGATGGCCTCGGCGAGGCCATCAACGACCGGCTGCGCCGTGCCGCCGCGCCGCGAT
AACATTGGAAGCGACCGACC

Downstream 100 bases:

>100_bases
GCTCGCAACATGGACAGTGCCCCTGCTCTCGCCATCTCCGACATCACCGATGCCGACGTGCCCGCGATCATCGCGCTGTG
GCAGCGCTGCGGCCTGACAA

Product: putative D-lactate ferricytochrome C oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MNISQPAFPPLPPELIAQFAAIVGERQALTAENDVAPYVTEERNLFHGRSPLVLRPGSTAEVAAICKLASAHRIALVPQG
GNTGLVGGQTPHNGEVVVSLKRMDRIRDVDTASNTMIAEAGVVLQVAQQKAAEVDRLFPLSLGAEGSCTIGGNLSTNAGG
TAALAYGVAREMALGVEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIITAASLKLFPKPRAIETAFVGLKSPE
DALKLLSIAQREAAGSLTSFELIAQIALAFSIRHVSGNRAPLSGPHPWFVLMELSSSRDDARATLETILEQGFEASIVDD
AVIAENLTQRMAFWKLREDISWAQKPEGGSIKHDISVPVAAVPAFIAEANEAVVRKVPGARPVPFGHLGDGNIHYNVSQP
IGADTADYLARWHEVNSVVFEIVLRMGGSISAEHGIGVLKRDELPDVKDPTAIALMRAIKAQFDPLGIMNPGKVL

Sequences:

>Translated_475_residues
MNISQPAFPPLPPELIAQFAAIVGERQALTAENDVAPYVTEERNLFHGRSPLVLRPGSTAEVAAICKLASAHRIALVPQG
GNTGLVGGQTPHNGEVVVSLKRMDRIRDVDTASNTMIAEAGVVLQVAQQKAAEVDRLFPLSLGAEGSCTIGGNLSTNAGG
TAALAYGVAREMALGVEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIITAASLKLFPKPRAIETAFVGLKSPE
DALKLLSIAQREAAGSLTSFELIAQIALAFSIRHVSGNRAPLSGPHPWFVLMELSSSRDDARATLETILEQGFEASIVDD
AVIAENLTQRMAFWKLREDISWAQKPEGGSIKHDISVPVAAVPAFIAEANEAVVRKVPGARPVPFGHLGDGNIHYNVSQP
IGADTADYLARWHEVNSVVFEIVLRMGGSISAEHGIGVLKRDELPDVKDPTAIALMRAIKAQFDPLGIMNPGKVL
>Mature_475_residues
MNISQPAFPPLPPELIAQFAAIVGERQALTAENDVAPYVTEERNLFHGRSPLVLRPGSTAEVAAICKLASAHRIALVPQG
GNTGLVGGQTPHNGEVVVSLKRMDRIRDVDTASNTMIAEAGVVLQVAQQKAAEVDRLFPLSLGAEGSCTIGGNLSTNAGG
TAALAYGVAREMALGVEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIITAASLKLFPKPRAIETAFVGLKSPE
DALKLLSIAQREAAGSLTSFELIAQIALAFSIRHVSGNRAPLSGPHPWFVLMELSSSRDDARATLETILEQGFEASIVDD
AVIAENLTQRMAFWKLREDISWAQKPEGGSIKHDISVPVAAVPAFIAEANEAVVRKVPGARPVPFGHLGDGNIHYNVSQP
IGADTADYLARWHEVNSVVFEIVLRMGGSISAEHGIGVLKRDELPDVKDPTAIALMRAIKAQFDPLGIMNPGKVL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=465, Percent_Identity=39.5698924731183, Blast_Score=292, Evalue=4e-79,
Organism=Homo sapiens, GI37595756, Length=489, Percent_Identity=29.2433537832311, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI37595754, Length=512, Percent_Identity=27.9296875, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI4501993, Length=208, Percent_Identity=27.8846153846154, Blast_Score=73, Evalue=6e-13,
Organism=Escherichia coli, GI1789351, Length=459, Percent_Identity=27.6688453159041, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1787977, Length=505, Percent_Identity=23.7623762376238, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI48994907, Length=218, Percent_Identity=28.8990825688073, Blast_Score=79, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17534361, Length=455, Percent_Identity=34.5054945054945, Blast_Score=266, Evalue=1e-71,
Organism=Caenorhabditis elegans, GI71992373, Length=482, Percent_Identity=26.7634854771784, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71992381, Length=484, Percent_Identity=26.6528925619835, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71992392, Length=364, Percent_Identity=27.7472527472527, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17556096, Length=195, Percent_Identity=26.1538461538462, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320023, Length=481, Percent_Identity=37.006237006237, Blast_Score=333, Evalue=2e-92,
Organism=Saccharomyces cerevisiae, GI6320764, Length=484, Percent_Identity=34.297520661157, Blast_Score=289, Evalue=7e-79,
Organism=Saccharomyces cerevisiae, GI6320027, Length=451, Percent_Identity=27.0509977827051, Blast_Score=132, Evalue=8e-32,
Organism=Drosophila melanogaster, GI18921117, Length=477, Percent_Identity=40.041928721174, Blast_Score=322, Evalue=2e-88,
Organism=Drosophila melanogaster, GI24639277, Length=477, Percent_Identity=40.041928721174, Blast_Score=322, Evalue=2e-88,
Organism=Drosophila melanogaster, GI24639275, Length=477, Percent_Identity=40.041928721174, Blast_Score=322, Evalue=2e-88,
Organism=Drosophila melanogaster, GI24653753, Length=183, Percent_Identity=30.6010928961749, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50430; Mature: 50430

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISQPAFPPLPPELIAQFAAIVGERQALTAENDVAPYVTEERNLFHGRSPLVLRPGSTA
CCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCEECCCCCCCCCCCEEECCCCCH
EVAAICKLASAHRIALVPQGGNTGLVGGQTPHNGEVVVSLKRMDRIRDVDTASNTMIAEA
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCEEHHC
GVVLQVAQQKAAEVDRLFPLSLGAEGSCTIGGNLSTNAGGTAALAYGVAREMALGVEVVL
CHHHHHHHHHHHHHHHCCEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEEE
ADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIITAASLKLFPKPRAIETAFVGLKSPE
ECCHHHHHHHHHHCCCCCCEEHHEEECCCCCEEEEEEEEEEECCCCCCHHHHEECCCCHH
DALKLLSIAQREAAGSLTSFELIAQIALAFSIRHVSGNRAPLSGPHPWFVLMELSSSRDD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCCCH
ARATLETILEQGFEASIVDDAVIAENLTQRMAFWKLREDISWAQKPEGGSIKHDISVPVA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHH
AVPAFIAEANEAVVRKVPGARPVPFGHLGDGNIHYNVSQPIGADTADYLARWHEVNSVVF
HHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
EIVLRMGGSISAEHGIGVLKRDELPDVKDPTAIALMRAIKAQFDPLGIMNPGKVL
HHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNISQPAFPPLPPELIAQFAAIVGERQALTAENDVAPYVTEERNLFHGRSPLVLRPGSTA
CCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCEECCCCCCCCCCCEEECCCCCH
EVAAICKLASAHRIALVPQGGNTGLVGGQTPHNGEVVVSLKRMDRIRDVDTASNTMIAEA
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCEEHHC
GVVLQVAQQKAAEVDRLFPLSLGAEGSCTIGGNLSTNAGGTAALAYGVAREMALGVEVVL
CHHHHHHHHHHHHHHHCCEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEEE
ADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIITAASLKLFPKPRAIETAFVGLKSPE
ECCHHHHHHHHHHCCCCCCEEHHEEECCCCCEEEEEEEEEEECCCCCCHHHHEECCCCHH
DALKLLSIAQREAAGSLTSFELIAQIALAFSIRHVSGNRAPLSGPHPWFVLMELSSSRDD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCCCH
ARATLETILEQGFEASIVDDAVIAENLTQRMAFWKLREDISWAQKPEGGSIKHDISVPVA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHH
AVPAFIAEANEAVVRKVPGARPVPFGHLGDGNIHYNVSQPIGADTADYLARWHEVNSVVF
HHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
EIVLRMGGSISAEHGIGVLKRDELPDVKDPTAIALMRAIKAQFDPLGIMNPGKVL
HHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]