| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is smeIM [H]
Identifier: 146339056
GI number: 146339056
Start: 2136827
End: 2137861
Strand: Reverse
Name: smeIM [H]
Synonym: BRADO2010
Alternate gene names: 146339056
Gene position: 2137861-2136827 (Counterclockwise)
Preceding gene: 146339059
Following gene: 146339050
Centisome position: 28.67
GC content: 66.38
Gene sequence:
>1035_bases ATGTCGAAACTGCCAGGCGCATCCGTCGACCTGGTGTTCGCTGATCCGCCCTACAATCTGCAGCTCAAGGGTGAGCTCAA ACGTCCCGACGAATCGCAGGTCGATGCCGTCGACGACGATTGGGACAAGTTCTCCTCGTTCACGGCCTACGACGATTTCA CGCGCGCCTGGCTGCTCGCCGCGCGCCGCGTGATGAAGCCGAGCGCGACGATCTGGGTGATCGGCTCCTATCACAACATC TTCCGCGTCGGCGCGATCATGCAGGATCTCGGCTTCTGGATCCTCAACGACATCGTCTGGCGCAAGTCGAACCCGATGCC CAACTTCCGCGGCCGCCGCTTCACCAACGCGCACGAGACCATGATCTGGGCCGCGCGGGACGAGAAGGCGAAGGGCTACA CCTTCAACTACGAAGCGCTGAAGGCGTCGAACGAGGACGTGCAGGCGCGCTCGGACTGGCTGATCCCGCTGTGCACCGGC GAGGAGCGGCTGAAGGACGGCGACGGCAAGAAGGTTCATCCGACGCAAAAGCCGGAAGGCCTGCTCGCGCGCGTGCTGCT GTCATCGTCGAAGCAGGGCGACCTGGTGATCGATCCTTTCAACGGCACCGGCACCACCGGCGCCGTGGCCAAGCGCCTCG GCCGCCGCTACATCGGCTTCGAGCGCGACAAGGCCTATGCGGAAGCCGCCGAGCGGCGTATTGCCGCGGTCGAGCCGCTC CCCGCGGAGACGCTCGCGCCGTTCATGACGGCGCGCGAGGCGCCGCGGGTGGCCTTCTCAGAACTGATCGAGCGCGGCAT GATCGCGCCAGGCGCCAAGCTTGTCGACTCCAAGCGCCGCTACGGCGCGCTGGTGCGCGCCGACGGGGCGATCATGCTGG GCGACAAGGTCGGTTCGATCCACCGCATCGGCGCAGTAGCGCAGGGATTGCCGGCCTGCAACGGCTGGACGTTCTGGCAC GTCGAGACCAAGGGCGGCCTCAGGCTGATCGACGAGCTGCGCGCCGAGATCCGCTCCGAGATGAACGCCGCCTGA
Upstream 100 bases:
>100_bases CATGGTTGAGTCGCGTCGCGGGGCGTCTGCAAGGGCGCCCCGCACTAAATTCCAGGCTCTTGAAGAGCACCGAATCATCG TCGGCGACTGCGTCGCCGAG
Downstream 100 bases:
>100_bases GACGTTACGACCTGCTCCGTCCCTGTCCGGAATAGCGCGCCAGGAGGTCCTCGACCTCGTACTGCTCGTCGTAGCGCGCG TCGTCGCGCGGCACCACCGA
Product: adenine DNA methyltransferase
Products: NA
Alternate protein names: M.SmeI; Adenine-specific methyltransferase SmeIP; M.CcrMI ortholog; Modification methylase SmeIP; M.SmeIP [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSKLPGASVDLVFADPPYNLQLKGELKRPDESQVDAVDDDWDKFSSFTAYDDFTRAWLLAARRVMKPSATIWVIGSYHNI FRVGAIMQDLGFWILNDIVWRKSNPMPNFRGRRFTNAHETMIWAARDEKAKGYTFNYEALKASNEDVQARSDWLIPLCTG EERLKDGDGKKVHPTQKPEGLLARVLLSSSKQGDLVIDPFNGTGTTGAVAKRLGRRYIGFERDKAYAEAAERRIAAVEPL PAETLAPFMTAREAPRVAFSELIERGMIAPGAKLVDSKRRYGALVRADGAIMLGDKVGSIHRIGAVAQGLPACNGWTFWH VETKGGLRLIDELRAEIRSEMNAA
Sequences:
>Translated_344_residues MSKLPGASVDLVFADPPYNLQLKGELKRPDESQVDAVDDDWDKFSSFTAYDDFTRAWLLAARRVMKPSATIWVIGSYHNI FRVGAIMQDLGFWILNDIVWRKSNPMPNFRGRRFTNAHETMIWAARDEKAKGYTFNYEALKASNEDVQARSDWLIPLCTG EERLKDGDGKKVHPTQKPEGLLARVLLSSSKQGDLVIDPFNGTGTTGAVAKRLGRRYIGFERDKAYAEAAERRIAAVEPL PAETLAPFMTAREAPRVAFSELIERGMIAPGAKLVDSKRRYGALVRADGAIMLGDKVGSIHRIGAVAQGLPACNGWTFWH VETKGGLRLIDELRAEIRSEMNAA >Mature_343_residues SKLPGASVDLVFADPPYNLQLKGELKRPDESQVDAVDDDWDKFSSFTAYDDFTRAWLLAARRVMKPSATIWVIGSYHNIF RVGAIMQDLGFWILNDIVWRKSNPMPNFRGRRFTNAHETMIWAARDEKAKGYTFNYEALKASNEDVQARSDWLIPLCTGE ERLKDGDGKKVHPTQKPEGLLARVLLSSSKQGDLVIDPFNGTGTTGAVAKRLGRRYIGFERDKAYAEAAERRIAAVEPLP AETLAPFMTAREAPRVAFSELIERGMIAPGAKLVDSKRRYGALVRADGAIMLGDKVGSIHRIGAVAQGLPACNGWTFWHV ETKGGLRLIDELRAEIRSEMNAA
Specific function: This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. Ccrm-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication an
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=265, Percent_Identity=30.5660377358491, Blast_Score=107, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 38312; Mature: 38181
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLPGASVDLVFADPPYNLQLKGELKRPDESQVDAVDDDWDKFSSFTAYDDFTRAWLLA CCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH ARRVMKPSATIWVIGSYHNIFRVGAIMQDLGFWILNDIVWRKSNPMPNFRGRRFTNAHET HHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCE MIWAARDEKAKGYTFNYEALKASNEDVQARSDWLIPLCTGEERLKDGDGKKVHPTQKPEG EEEEECCCCCCCEEEEHHHHCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCHH LLARVLLSSSKQGDLVIDPFNGTGTTGAVAKRLGRRYIGFERDKAYAEAAERRIAAVEPL HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PAETLAPFMTAREAPRVAFSELIERGMIAPGAKLVDSKRRYGALVRADGAIMLGDKVGSI CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCHHHHCEEEEECCEEEECCCCCCH HRIGAVAQGLPACNGWTFWHVETKGGLRLIDELRAEIRSEMNAA HHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKLPGASVDLVFADPPYNLQLKGELKRPDESQVDAVDDDWDKFSSFTAYDDFTRAWLLA CCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH ARRVMKPSATIWVIGSYHNIFRVGAIMQDLGFWILNDIVWRKSNPMPNFRGRRFTNAHET HHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCE MIWAARDEKAKGYTFNYEALKASNEDVQARSDWLIPLCTGEERLKDGDGKKVHPTQKPEG EEEEECCCCCCCEEEEHHHHCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCHH LLARVLLSSSKQGDLVIDPFNGTGTTGAVAKRLGRRYIGFERDKAYAEAAERRIAAVEPL HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PAETLAPFMTAREAPRVAFSELIERGMIAPGAKLVDSKRRYGALVRADGAIMLGDKVGSI CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCHHHHCEEEEECCEEEECCCCCCH HRIGAVAQGLPACNGWTFWHVETKGGLRLIDELRAEIRSEMNAA HHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9294447; 11481430 [H]