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The map label for this gene is cheD [H]

Identifier: 146338887

GI number: 146338887

Start: 1953682

End: 1954323

Strand: Direct

Name: cheD [H]

Synonym: BRADO1826

Alternate gene names: 146338887

Gene position: 1953682-1954323 (Clockwise)

Preceding gene: 146338886

Following gene: 146338888

Centisome position: 26.2

GC content: 63.86

Gene sequence:

>642_bases
ATGATCAAGACGAGGACCGGGCGCCGCGCGACGACGGCGACACCTCCGACCGAAGAGATCGTGACGGGCTCGCGGCGCTA
TCGCGACAAGCGCTTCGACGCCGTCGTCGTCAAGGTGTTTCCGGGCGAGCATTACGTCACCGACAAGGAGGACGAGATGC
TGGTCACGGTTCTCGGCTCCTGCGTGGCTGCCTGCATCCGTGATCCGAAGACCGGGGTCGGCGGCATGAATCATTTCATG
CTGCCCGAGAATTTCAGCCATTGGGGCAATGCGTCCGACAGCATGCGCTATGGCAACGTCGCCATGGAGCGCCTGATCAA
CGACGTTCTGATCCGCGGCGGCGCCCGCCGCAGGCTCGAGATCAAGGTGTTCGGCGGCGCCAACGTCCTGAATGGCGTAG
CCAAGATCGGGCATCGCAATGCCGATTTCGTCGAGGAGTACCTCGCCGCGGAGAATCTTCCGATCGCGGCGAGCCATCTG
CGTGGCTCGCTGCCGCGCCGTGTCCACTATTTTCCCGCGACCGGCCGGGTGATGCTGCTCGAACTGCCGCGCGCCGACCA
CGAGGCGCTGGTCCGCCACGAGACATCCTACAAATCCAAGATCCAGGTCGAGCCCGTCGCCGGATCGATCGAGCTCTTTT
GA

Upstream 100 bases:

>100_bases
TCAAGCCGGACGGCTGGCTGATCATCGGCCATTCAGAGAATCTGCTTGGTGTCACTGACCGTTTCGATCTGGTCGGGCGA
ACGATCTATCGGAGGGTCAA

Downstream 100 bases:

>100_bases
GGCAGTACATATGAGTGCCATTCGCGTTCTGATCGTCGACGACTCGGCCTTCGTGCGCCAGGTCCTGACCGACATTTTGT
CGAGCGACCCGGCGATCCAG

Product: chemotaxis protein CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MIKTRTGRRATTATPPTEEIVTGSRRYRDKRFDAVVVKVFPGEHYVTDKEDEMLVTVLGSCVAACIRDPKTGVGGMNHFM
LPENFSHWGNASDSMRYGNVAMERLINDVLIRGGARRRLEIKVFGGANVLNGVAKIGHRNADFVEEYLAAENLPIAASHL
RGSLPRRVHYFPATGRVMLLELPRADHEALVRHETSYKSKIQVEPVAGSIELF

Sequences:

>Translated_213_residues
MIKTRTGRRATTATPPTEEIVTGSRRYRDKRFDAVVVKVFPGEHYVTDKEDEMLVTVLGSCVAACIRDPKTGVGGMNHFM
LPENFSHWGNASDSMRYGNVAMERLINDVLIRGGARRRLEIKVFGGANVLNGVAKIGHRNADFVEEYLAAENLPIAASHL
RGSLPRRVHYFPATGRVMLLELPRADHEALVRHETSYKSKIQVEPVAGSIELF
>Mature_213_residues
MIKTRTGRRATTATPPTEEIVTGSRRYRDKRFDAVVVKVFPGEHYVTDKEDEMLVTVLGSCVAACIRDPKTGVGGMNHFM
LPENFSHWGNASDSMRYGNVAMERLINDVLIRGGARRRLEIKVFGGANVLNGVAKIGHRNADFVEEYLAAENLPIAASHL
RGSLPRRVHYFPATGRVMLLELPRADHEALVRHETSYKSKIQVEPVAGSIELF

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 23730; Mature: 23730

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTRTGRRATTATPPTEEIVTGSRRYRDKRFDAVVVKVFPGEHYVTDKEDEMLVTVLGS
CCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCEEEEEEEECCCCEECCCCCHHHHHHHHH
CVAACIRDPKTGVGGMNHFMLPENFSHWGNASDSMRYGNVAMERLINDVLIRGGARRRLE
HHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
IKVFGGANVLNGVAKIGHRNADFVEEYLAAENLPIAASHLRGSLPRRVHYFPATGRVMLL
EEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHHCCCCCCEEEEECCCCCEEEE
ELPRADHEALVRHETSYKSKIQVEPVAGSIELF
ECCCCCHHHHHHHCCCCCCEEEEEECCCCEEEC
>Mature Secondary Structure
MIKTRTGRRATTATPPTEEIVTGSRRYRDKRFDAVVVKVFPGEHYVTDKEDEMLVTVLGS
CCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCEEEEEEEECCCCEECCCCCHHHHHHHHH
CVAACIRDPKTGVGGMNHFMLPENFSHWGNASDSMRYGNVAMERLINDVLIRGGARRRLE
HHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
IKVFGGANVLNGVAKIGHRNADFVEEYLAAENLPIAASHLRGSLPRRVHYFPATGRVMLL
EEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHHCCCCCCEEEEECCCCCEEEE
ELPRADHEALVRHETSYKSKIQVEPVAGSIELF
ECCCCCHHHHHHHCCCCCCEEEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA