| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338881
Identifier: 146338881
GI number: 146338881
Start: 1947128
End: 1947448
Strand: Direct
Name: 146338881
Synonym: BRADO1820
Alternate gene names: NA
Gene position: 1947128-1947448 (Clockwise)
Preceding gene: 146338880
Following gene: 146338882
Centisome position: 26.11
GC content: 65.11
Gene sequence:
>321_bases ATGACGGACGCGATCCCGACGACAGAGCCCGGCGCGACCGACGATATCGCCGCCGCCTACGTGCTGCCTCAGATGCTCGA TCTGACGCAGGCGACCCAGCTACGCGACGAGATGATCCGGCTCGCGGCAGCCGGTGACGTCTTGCTCGACGCGGCCGGCG TGGAGCGGATGTCGACCCCATGCGTCCAGATTCTGCTCGCCGCCGCCCATGGTGCCCGCGCCGCCAACAAGTCCTTCAAG ATCACGCAACCATCGGAGCTGTTCAGGACGGCGATCGCCGACCTCGGACTTCGGCACGAATTTGAAAACTGGATGGAGTG A
Upstream 100 bases:
>100_bases GACGAAAAAAGGTCGTCGCCGGAACCAATTGAGGTCCGCTTGTAGCCAGTGACGTGTTCGGCGTCGCGGCCAGCGCGACG TAGTCTACGGAATTTCGACG
Downstream 100 bases:
>100_bases CATGACCAAGCGAATTCTGGCAGTCGACGATTCGAAGACCATGCGCGACATGGTGTCCTTCACGTTGAAGAAGGCCGGCT TCGACGTGGCGGAAGCCGAG
Product: putative anti-sigma factor antagonist
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTDAIPTTEPGATDDIAAAYVLPQMLDLTQATQLRDEMIRLAAAGDVLLDAAGVERMSTPCVQILLAAAHGARAANKSFK ITQPSELFRTAIADLGLRHEFENWME
Sequences:
>Translated_106_residues MTDAIPTTEPGATDDIAAAYVLPQMLDLTQATQLRDEMIRLAAAGDVLLDAAGVERMSTPCVQILLAAAHGARAANKSFK ITQPSELFRTAIADLGLRHEFENWME >Mature_105_residues TDAIPTTEPGATDDIAAAYVLPQMLDLTQATQLRDEMIRLAAAGDVLLDAAGVERMSTPCVQILLAAAHGARAANKSFKI TQPSELFRTAIADLGLRHEFENWME
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11455; Mature: 11324
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAIPTTEPGATDDIAAAYVLPQMLDLTQATQLRDEMIRLAAAGDVLLDAAGVERMSTP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHH CVQILLAAAHGARAANKSFKITQPSELFRTAIADLGLRHEFENWME HHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDAIPTTEPGATDDIAAAYVLPQMLDLTQATQLRDEMIRLAAAGDVLLDAAGVERMSTP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHH CVQILLAAAHGARAANKSFKITQPSELFRTAIADLGLRHEFENWME HHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA