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The map label for this gene is yjfF [H]

Identifier: 146338871

GI number: 146338871

Start: 1935155

End: 1936165

Strand: Direct

Name: yjfF [H]

Synonym: BRADO1810

Alternate gene names: 146338871

Gene position: 1935155-1936165 (Clockwise)

Preceding gene: 146338870

Following gene: 146338872

Centisome position: 25.95

GC content: 65.48

Gene sequence:

>1011_bases
ATGAAGGCGTCGACCCCGGTTGCGATCACCGCCTTCGTGCTGGTCGCCGGCTTCGCGCTGTGCGCGCTGCAATTCCCGAA
TATCGCCTCGACCCGGGTGGTGGCCAATCTGCTCACCGACAACGCCTTCCTCGGCATCGTCGCGGCCGGCATGACCTTCG
TCATCATTTCCGGCGGCATCGATCTCTCGGTCGGCTCGGTGATCGGCTTCACCACCGTGTTCGTGGCGCTGGCCGTCGAG
CGCTGGGGCATTCCGCCGTTCGCGGCGTTTGCGCTGGTGCTCGTTCTGTGCGCGCTGTTTGGCGCCGCCATGGGCGCCGT
GATCCACGTCTTCGAGCTGCCGCCGTTCATCGTCACGCTCGCCGGCATGTTCCTCGCGCGTGGCGTCAGCTTCCTGCTCT
CGACCGAGTCGATCCCGATCACCGCGCCGATCTACAGCGCTGTTTCGGATTTTGCGATCCGGCTGCCCGGCGGCGGGCGG
CTCACCGCGATCGCGATCGCGATGCTCGTCATCCTGGTGCTCTGCGCACTGCTGCTGCACCTGACGCGGTTCGGCGCCAA
CGTCTATGCCCTCGGCGGCAGCCGTGCTGCCACCGCACTGATGGGCATCCCCGTCGGGCCGATGACCATCCGGATCTATA
TGTTGTCCAGCGTGCTTGCGGGCCTCGCGGGCATGGTCTTCTCCTTCTATACCGCTGCCGGATATTCGCTGTCGGCTGTC
GGCGTCGAACTCGACACGATCGCGGCGGTCGTGATCGGCGGAACCTTATTGACGGGCGGGCAAGGCTCCGTCATCGGTAC
CTTCCTTGGCGTCCTGATCCAGGGCATGATCCAGACCTACATCAATTTCGACGGGACGCTGTCGAGCTGGTGGACCAAGA
TCGCGACGGGGGTTCTGTTGTTCGTCTTCATTGCGCTGCAGCAAGGTCTGATGGCGCTCGCGCGCCGCTCGTCGCTTAAA
CCGGCAGGGACCAGGCTTGCGGAGGCCAGGCCGGCCGGGGCGCCGACATGA

Upstream 100 bases:

>100_bases
TGCTGGTCAAGGCCGTCGTCGTGCTCGCCGTGCTGCTGGCGCAGTCGCCGCGGCTCGGCGATCTCTCGCGCTTCACCGCG
CGCTGGCGGAGGACCAAGCC

Downstream 100 bases:

>100_bases
CGTCGCCGCATATCGTCTCGATTCCGACCCGACGCGCCCATTCCAACCACGCCGAGGTCGCCCGCAGCATCGGTATCGAC
ATCATCTCGGGCCGCCTCGG

Product: inner membrane ABC transporter permease YjfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKASTPVAITAFVLVAGFALCALQFPNIASTRVVANLLTDNAFLGIVAAGMTFVIISGGIDLSVGSVIGFTTVFVALAVE
RWGIPPFAAFALVLVLCALFGAAMGAVIHVFELPPFIVTLAGMFLARGVSFLLSTESIPITAPIYSAVSDFAIRLPGGGR
LTAIAIAMLVILVLCALLLHLTRFGANVYALGGSRAATALMGIPVGPMTIRIYMLSSVLAGLAGMVFSFYTAAGYSLSAV
GVELDTIAAVVIGGTLLTGGQGSVIGTFLGVLIQGMIQTYINFDGTLSSWWTKIATGVLLFVFIALQQGLMALARRSSLK
PAGTRLAEARPAGAPT

Sequences:

>Translated_336_residues
MKASTPVAITAFVLVAGFALCALQFPNIASTRVVANLLTDNAFLGIVAAGMTFVIISGGIDLSVGSVIGFTTVFVALAVE
RWGIPPFAAFALVLVLCALFGAAMGAVIHVFELPPFIVTLAGMFLARGVSFLLSTESIPITAPIYSAVSDFAIRLPGGGR
LTAIAIAMLVILVLCALLLHLTRFGANVYALGGSRAATALMGIPVGPMTIRIYMLSSVLAGLAGMVFSFYTAAGYSLSAV
GVELDTIAAVVIGGTLLTGGQGSVIGTFLGVLIQGMIQTYINFDGTLSSWWTKIATGVLLFVFIALQQGLMALARRSSLK
PAGTRLAEARPAGAPT
>Mature_336_residues
MKASTPVAITAFVLVAGFALCALQFPNIASTRVVANLLTDNAFLGIVAAGMTFVIISGGIDLSVGSVIGFTTVFVALAVE
RWGIPPFAAFALVLVLCALFGAAMGAVIHVFELPPFIVTLAGMFLARGVSFLLSTESIPITAPIYSAVSDFAIRLPGGGR
LTAIAIAMLVILVLCALLLHLTRFGANVYALGGSRAATALMGIPVGPMTIRIYMLSSVLAGLAGMVFSFYTAAGYSLSAV
GVELDTIAAVVIGGTLLTGGQGSVIGTFLGVLIQGMIQTYINFDGTLSSWWTKIATGVLLFVFIALQQGLMALARRSSLK
PAGTRLAEARPAGAPT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082395, Length=330, Percent_Identity=60, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1788896, Length=301, Percent_Identity=36.2126245847176, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1790191, Length=282, Percent_Identity=36.1702127659575, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI145693152, Length=270, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789992, Length=347, Percent_Identity=30.5475504322767, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790524, Length=286, Percent_Identity=29.020979020979, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787794, Length=292, Percent_Identity=28.0821917808219, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788471, Length=252, Percent_Identity=29.3650793650794, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI145693214, Length=259, Percent_Identity=33.2046332046332, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34553; Mature: 34553

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASTPVAITAFVLVAGFALCALQFPNIASTRVVANLLTDNAFLGIVAAGMTFVIISGGI
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCC
DLSVGSVIGFTTVFVALAVERWGIPPFAAFALVLVLCALFGAAMGAVIHVFELPPFIVTL
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AGMFLARGVSFLLSTESIPITAPIYSAVSDFAIRLPGGGRLTAIAIAMLVILVLCALLLH
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LTRFGANVYALGGSRAATALMGIPVGPMTIRIYMLSSVLAGLAGMVFSFYTAAGYSLSAV
HHHHCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC
GVELDTIAAVVIGGTLLTGGQGSVIGTFLGVLIQGMIQTYINFDGTLSSWWTKIATGVLL
CCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FVFIALQQGLMALARRSSLKPAGTRLAEARPAGAPT
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MKASTPVAITAFVLVAGFALCALQFPNIASTRVVANLLTDNAFLGIVAAGMTFVIISGGI
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCC
DLSVGSVIGFTTVFVALAVERWGIPPFAAFALVLVLCALFGAAMGAVIHVFELPPFIVTL
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AGMFLARGVSFLLSTESIPITAPIYSAVSDFAIRLPGGGRLTAIAIAMLVILVLCALLLH
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LTRFGANVYALGGSRAATALMGIPVGPMTIRIYMLSSVLAGLAGMVFSFYTAAGYSLSAV
HHHHCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC
GVELDTIAAVVIGGTLLTGGQGSVIGTFLGVLIQGMIQTYINFDGTLSSWWTKIATGVLL
CCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FVFIALQQGLMALARRSSLKPAGTRLAEARPAGAPT
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2843822; 7984428 [H]