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The map label for this gene is ycfQ [C]

Identifier: 146338730

GI number: 146338730

Start: 1781544

End: 1782233

Strand: Direct

Name: ycfQ [C]

Synonym: BRADO1663

Alternate gene names: 146338730

Gene position: 1781544-1782233 (Clockwise)

Preceding gene: 146338729

Following gene: 146338732

Centisome position: 23.89

GC content: 66.81

Gene sequence:

>690_bases
ATGGCCCGTACGCAGGCCAAGGTGAAACGTGGTGACGTCGCGCGCACGGTCGGTCTGCGCGGCCGGGTCGGGCGGCCGCC
AAAGGCCCTCGCCGGCAACATCGAGGAGCGGATCCTGGATGCGGCGCGCGAGGTGTTTCTCGAGCGCGGGTTCGACGGGA
CCAGCATCGATGAAATCGCCGAGCGGGCGCCGGCTTCCAAACCCACCATCTACGCGCGCTATGCCGGCAAGCCCGCCCTG
TTCGCCGCCATCGTCGAACGTTCGATCGGCGAGCTGACGGCGCTGCGCTCGACCTACACGCCGCCGGCCGGGACGGTTCA
GGAGAAGCTGGCCGGGCTTGCGACGGCGATCGTCGACCGAGCGATGAAGGAATCGATCGGCCTGCTGCGCGTCACGATCG
GCGAGGCCTACCGCTTTCCTGATCTCAGCTGCCAATTCCACGAGGTCTCGCGCAAGCGTACCACCCAGGTGGTCGCGGGA
CTGCTCGCCGACACCATCGGCTCTGCCGCTCCGAAGCGCCCGCCTTCAAAGACGTATGAGGCCGCGGCGGAGATCTTCAT
CGACCTGATCGTGCTGCCGCTCCTGATGCGCGCGCTGATGGGCATGAAGGAGAGGACCATCCGCAAGGAGATGCCCGGCT
TCGTGCGCGAGCGCGTCAAGATTTTTCTCGCGCTGCACGCCAAACTGTGA

Upstream 100 bases:

>100_bases
GCGCGCATAGCTGCCTCGCGTCTGGCGTTCTATTGCTGCAGAGCTGAGAACGTGTAATCCCTTGCCGACGGACTGACATG
TCGAGTCGAGGTCTTGGAGT

Downstream 100 bases:

>100_bases
CCTGAAGCGCTGAAGCGACCAGACATCTTACAGAGACATGATGTCGCAGGCGGCCACGTCTGCCGCCCGTTCGATGCGGC
TGAGCGTCCGCGGGGTCAGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Tetr Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR/AcrR Family; Bacterial Regulatory Protein TetR Family Protein

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MARTQAKVKRGDVARTVGLRGRVGRPPKALAGNIEERILDAAREVFLERGFDGTSIDEIAERAPASKPTIYARYAGKPAL
FAAIVERSIGELTALRSTYTPPAGTVQEKLAGLATAIVDRAMKESIGLLRVTIGEAYRFPDLSCQFHEVSRKRTTQVVAG
LLADTIGSAAPKRPPSKTYEAAAEIFIDLIVLPLLMRALMGMKERTIRKEMPGFVRERVKIFLALHAKL

Sequences:

>Translated_229_residues
MARTQAKVKRGDVARTVGLRGRVGRPPKALAGNIEERILDAAREVFLERGFDGTSIDEIAERAPASKPTIYARYAGKPAL
FAAIVERSIGELTALRSTYTPPAGTVQEKLAGLATAIVDRAMKESIGLLRVTIGEAYRFPDLSCQFHEVSRKRTTQVVAG
LLADTIGSAAPKRPPSKTYEAAAEIFIDLIVLPLLMRALMGMKERTIRKEMPGFVRERVKIFLALHAKL
>Mature_228_residues
ARTQAKVKRGDVARTVGLRGRVGRPPKALAGNIEERILDAAREVFLERGFDGTSIDEIAERAPASKPTIYARYAGKPALF
AAIVERSIGELTALRSTYTPPAGTVQEKLAGLATAIVDRAMKESIGLLRVTIGEAYRFPDLSCQFHEVSRKRTTQVVAGL
LADTIGSAAPKRPPSKTYEAAAEIFIDLIVLPLLMRALMGMKERTIRKEMPGFVRERVKIFLALHAKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25056; Mature: 24925

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTQAKVKRGDVARTVGLRGRVGRPPKALAGNIEERILDAAREVFLERGFDGTSIDEIA
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
ERAPASKPTIYARYAGKPALFAAIVERSIGELTALRSTYTPPAGTVQEKLAGLATAIVDR
HHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AMKESIGLLRVTIGEAYRFPDLSCQFHEVSRKRTTQVVAGLLADTIGSAAPKRPPSKTYE
HHHHHHCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
AAAEIFIDLIVLPLLMRALMGMKERTIRKEMPGFVRERVKIFLALHAKL
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARTQAKVKRGDVARTVGLRGRVGRPPKALAGNIEERILDAAREVFLERGFDGTSIDEIA
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
ERAPASKPTIYARYAGKPALFAAIVERSIGELTALRSTYTPPAGTVQEKLAGLATAIVDR
HHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AMKESIGLLRVTIGEAYRFPDLSCQFHEVSRKRTTQVVAGLLADTIGSAAPKRPPSKTYE
HHHHHHCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
AAAEIFIDLIVLPLLMRALMGMKERTIRKEMPGFVRERVKIFLALHAKL
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA