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The map label for this gene is pufA

Identifier: 146338691

GI number: 146338691

Start: 1737719

End: 1737907

Strand: Direct

Name: pufA

Synonym: BRADO1623

Alternate gene names: NA

Gene position: 1737719-1737907 (Clockwise)

Preceding gene: 146338690

Following gene: 146338692

Centisome position: 23.3

GC content: 60.32

Gene sequence:

>189_bases
ATGTGGCGCTTGTGGTTGCTGTTCGATCCCCGCAGGGTTCTCGTGGCTCTCGGCGTGTTCCTGTTCGGGCTGGCATTGGT
GATTCACTTCATCCTGCTCAGCACGAACCGCTTCAACTGGCTGGAAGGACCTCGCGCGGCGAAGACGTCGTCGATCTCCG
CTCCAGTCACGCCGGTGAAACTCACCTAG

Upstream 100 bases:

>100_bases
TGGCTGCCGGGGCCGACGGGCTACAAGGCGGCGCTGGATGGGGCAACCCACTACGCCACGCTCGCGCTCTCCTACCTGAC
CTGATCGAAAGGAGAAAACT

Downstream 100 bases:

>100_bases
AGCTTCGGCTCCAACAATGGGAAGCGGGCGTAGGCTCGGCGGCAGACCCTGCTCGCCCGCTTCCCAAATCTCCACGCAAT
TCAATCTCTAGAGCTCCAAA

Product: light harvesting 1 subunit alpha

Products: NA

Alternate protein names: Antenna pigment protein alpha chain [H]

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MWRLWLLFDPRRVLVALGVFLFGLALVIHFILLSTNRFNWLEGPRAAKTSSISAPVTPVKLT

Sequences:

>Translated_62_residues
MWRLWLLFDPRRVLVALGVFLFGLALVIHFILLSTNRFNWLEGPRAAKTSSISAPVTPVKLT
>Mature_62_residues
MWRLWLLFDPRRVLVALGVFLFGLALVIHFILLSTNRFNWLEGPRAAKTSSISAPVTPVKLT

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex alpha subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000066
- InterPro:   IPR002361
- InterPro:   IPR018332 [H]

Pfam domain/function: PF00556 LHC [H]

EC number: NA

Molecular weight: Translated: 7051; Mature: 7051

Theoretical pI: Translated: 12.34; Mature: 12.34

Prosite motif: PS00968 ANTENNA_COMP_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRLWLLFDPRRVLVALGVFLFGLALVIHFILLSTNRFNWLEGPRAAKTSSISAPVTPVK
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE
LT
EC
>Mature Secondary Structure
MWRLWLLFDPRRVLVALGVFLFGLALVIHFILLSTNRFNWLEGPRAAKTSSISAPVTPVK
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE
LT
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1577009 [H]