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The map label for this gene is pufB

Identifier: 146338690

GI number: 146338690

Start: 1737475

End: 1737702

Strand: Direct

Name: pufB

Synonym: BRADO1622

Alternate gene names: NA

Gene position: 1737475-1737702 (Clockwise)

Preceding gene: 146338689

Following gene: 146338691

Centisome position: 23.3

GC content: 61.84

Gene sequence:

>228_bases
ATGGTGGAACCAAATAAGGGAGGCTCTCTGTCGGGGCTGACCGAATCGGAGGCTAGGGAATTCCATAGCATCTTCATGAC
GAGCTTTGTGGTCTTCACGGCGGTTGCGATCGTCGCCCACATTCTCGCCTGGATGTGGCGTCCCTGGCTGCCGGGGCCGA
CGGGCTACAAGGCGGCGCTGGATGGGGCAACCCACTACGCCACGCTCGCGCTCTCCTACCTGACCTGA

Upstream 100 bases:

>100_bases
TCGCCGCGCGGATGCCATCCCGGCAACGGGATGGCGCTTCGACGCCGCTCATCTCGGTGGGCGGCATCCGGCCGAAAGGC
CAACACCAGGAGGTACTACT

Downstream 100 bases:

>100_bases
TCGAAAGGAGAAAACTATGTGGCGCTTGTGGTTGCTGTTCGATCCCCGCAGGGTTCTCGTGGCTCTCGGCGTGTTCCTGT
TCGGGCTGGCATTGGTGATT

Product: light harvesting 1 subunit beta

Products: NA

Alternate protein names: Antenna pigment protein beta chain [H]

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MVEPNKGGSLSGLTESEAREFHSIFMTSFVVFTAVAIVAHILAWMWRPWLPGPTGYKAALDGATHYATLALSYLT

Sequences:

>Translated_75_residues
MVEPNKGGSLSGLTESEAREFHSIFMTSFVVFTAVAIVAHILAWMWRPWLPGPTGYKAALDGATHYATLALSYLT
>Mature_75_residues
MVEPNKGGSLSGLTESEAREFHSIFMTSFVVFTAVAIVAHILAWMWRPWLPGPTGYKAALDGATHYATLALSYLT

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000066
- InterPro:   IPR002362 [H]

Pfam domain/function: PF00556 LHC [H]

EC number: NA

Molecular weight: Translated: 8187; Mature: 8187

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00969 ANTENNA_COMP_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEPNKGGSLSGLTESEAREFHSIFMTSFVVFTAVAIVAHILAWMWRPWLPGPTGYKAAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
DGATHYATLALSYLT
CCCHHHHHHHHHHCC
>Mature Secondary Structure
MVEPNKGGSLSGLTESEAREFHSIFMTSFVVFTAVAIVAHILAWMWRPWLPGPTGYKAAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
DGATHYATLALSYLT
CCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2669779 [H]