| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gsiD [H]
Identifier: 146338648
GI number: 146338648
Start: 1692759
End: 1693625
Strand: Direct
Name: gsiD [H]
Synonym: BRADO1579
Alternate gene names: 146338648
Gene position: 1692759-1693625 (Clockwise)
Preceding gene: 146338647
Following gene: 146338649
Centisome position: 22.7
GC content: 68.74
Gene sequence:
>867_bases GTGATCGTCCAGCCCGTTGTCGCGCCTGCGACGAACACGTTCTGGCGCCGCGCGCTGCGCCATCGCAGCTTTACGGTCGG TGCGCTGCTCTGCCTCGTCGTGCTCGGCGCCGCGCTGCTGTCGCTGGTGTGGACGCCGTGGTCGGCTTATGAGATCGACG TCGCCTCGAAGCTGCGGCCGCCCTCAGCGGCGCATTGGCTCGGCACCGACGTGCTCGGTCGCGACATCGTCTCCTTGCTG CTGGTCGGCGCGCGCGCGACTATTCTGGTCGGCATCATCGCGGTCGGCATCGGGCTGACCTGCGGCGTCTGTCTCGGGCT GATCGCGGCCGCGCAGCGCGGCTGGACCGAGGAGCTGGTGATGCGCTTCAGCGATTTCACCTTCGCCTTTCCCGCCGTGC TGTCGGCGATCATGCTGGCTGCGGTGATCGGACCGGGCATGGTGACGTCGATCACCGCGATCGGCATCTTCCAGATCCCG GTGTTCGTGCGCGTCACCCGCGGCTCCGCCGGCGCGATCTGGGCGCGCGAGTTCATCCTGGCGGCGAGCGCCGCCGGCAA GGGTCGCTTCCGCATCACCATCGAGCACGTGCTGCCGAACATCCTGTCGATCCTGATCGTGCAGGCGACGATCCAGTTCG CGCTGGCGATTCTCGCGGAGGCCGCGCTGTCCTATCTTGGCCTCGGCACGCAGCCGCCGCAGCCGTCCTGGGGGCGCATG CTGAACGATGCACAGACGCTGCTGTTCCAGTCGCCGAGCCTCGCGGTCTATCCGGGTGCTGCGATCGCGCTCGCTGTGCT CGGCCTCAATCTGCTCGGGGACGGTCTGCGCGACCTGCTCGATCCGCGGCTGGCGAGGCAGCGATGA
Upstream 100 bases:
>100_bases TGCTGCTGGCCGCCATGGTGATCATCGTCAACTTCGTGGTCGACGTGCTCTATGCGGTCATCGATCCGCGCATCAAGGTG CACGAGCTGTGAGTTCGTCC
Downstream 100 bases:
>100_bases GCGCAGACAAACAGGCGCTGCTCGAGGTCTCAGGCCTCGGCATCCGGCTCAATACCAGCCGCGGCCCAGCGCAGGCCGTG CGCGATGTGTCCTTAGCGTT
Product: putative oligopeptide ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MIVQPVVAPATNTFWRRALRHRSFTVGALLCLVVLGAALLSLVWTPWSAYEIDVASKLRPPSAAHWLGTDVLGRDIVSLL LVGARATILVGIIAVGIGLTCGVCLGLIAAAQRGWTEELVMRFSDFTFAFPAVLSAIMLAAVIGPGMVTSITAIGIFQIP VFVRVTRGSAGAIWAREFILAASAAGKGRFRITIEHVLPNILSILIVQATIQFALAILAEAALSYLGLGTQPPQPSWGRM LNDAQTLLFQSPSLAVYPGAAIALAVLGLNLLGDGLRDLLDPRLARQR
Sequences:
>Translated_288_residues MIVQPVVAPATNTFWRRALRHRSFTVGALLCLVVLGAALLSLVWTPWSAYEIDVASKLRPPSAAHWLGTDVLGRDIVSLL LVGARATILVGIIAVGIGLTCGVCLGLIAAAQRGWTEELVMRFSDFTFAFPAVLSAIMLAAVIGPGMVTSITAIGIFQIP VFVRVTRGSAGAIWAREFILAASAAGKGRFRITIEHVLPNILSILIVQATIQFALAILAEAALSYLGLGTQPPQPSWGRM LNDAQTLLFQSPSLAVYPGAAIALAVLGLNLLGDGLRDLLDPRLARQR >Mature_288_residues MIVQPVVAPATNTFWRRALRHRSFTVGALLCLVVLGAALLSLVWTPWSAYEIDVASKLRPPSAAHWLGTDVLGRDIVSLL LVGARATILVGIIAVGIGLTCGVCLGLIAAAQRGWTEELVMRFSDFTFAFPAVLSAIMLAAVIGPGMVTSITAIGIFQIP VFVRVTRGSAGAIWAREFILAASAAGKGRFRITIEHVLPNILSILIVQATIQFALAILAEAALSYLGLGTQPPQPSWGRM LNDAQTLLFQSPSLAVYPGAAIALAVLGLNLLGDGLRDLLDPRLARQR
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=286, Percent_Identity=40.5594405594406, Blast_Score=213, Evalue=1e-56, Organism=Escherichia coli, GI1787760, Length=269, Percent_Identity=37.546468401487, Blast_Score=184, Evalue=8e-48, Organism=Escherichia coli, GI1789964, Length=292, Percent_Identity=38.6986301369863, Blast_Score=154, Evalue=5e-39, Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=34.2857142857143, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1787549, Length=279, Percent_Identity=35.1254480286738, Blast_Score=134, Evalue=8e-33, Organism=Escherichia coli, GI1787498, Length=271, Percent_Identity=30.9963099630996, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1788505, Length=230, Percent_Identity=27.3913043478261, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30551; Mature: 30551
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVQPVVAPATNTFWRRALRHRSFTVGALLCLVVLGAALLSLVWTPWSAYEIDVASKLRP CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCC PSAAHWLGTDVLGRDIVSLLLVGARATILVGIIAVGIGLTCGVCLGLIAAAQRGWTEELV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH MRFSDFTFAFPAVLSAIMLAAVIGPGMVTSITAIGIFQIPVFVRVTRGSAGAIWAREFIL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHH AASAAGKGRFRITIEHVLPNILSILIVQATIQFALAILAEAALSYLGLGTQPPQPSWGRM HHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LNDAQTLLFQSPSLAVYPGAAIALAVLGLNLLGDGLRDLLDPRLARQR HHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC >Mature Secondary Structure MIVQPVVAPATNTFWRRALRHRSFTVGALLCLVVLGAALLSLVWTPWSAYEIDVASKLRP CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCC PSAAHWLGTDVLGRDIVSLLLVGARATILVGIIAVGIGLTCGVCLGLIAAAQRGWTEELV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH MRFSDFTFAFPAVLSAIMLAAVIGPGMVTSITAIGIFQIPVFVRVTRGSAGAIWAREFIL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHH AASAAGKGRFRITIEHVLPNILSILIVQATIQFALAILAEAALSYLGLGTQPPQPSWGRM HHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LNDAQTLLFQSPSLAVYPGAAIALAVLGLNLLGDGLRDLLDPRLARQR HHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA