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The map label for this gene is dapA [H]

Identifier: 146338487

GI number: 146338487

Start: 1502630

End: 1503541

Strand: Direct

Name: dapA [H]

Synonym: BRADO1404

Alternate gene names: 146338487

Gene position: 1502630-1503541 (Clockwise)

Preceding gene: 146338484

Following gene: 146338488

Centisome position: 20.15

GC content: 65.13

Gene sequence:

>912_bases
TTGCGAAAGCGGCGGACCGGCCGCTATACCGGCCAGATGACCGATTTTCATGGTGTTTTCCCCTATCTGGCCTCTCCGAT
CGGTACCGAGGGAGCAATCCGCACCGAGGTGCTGGGCAGGCTGTGCGACGACCTGATCCATGCCGGCGTGCATGGGCTGA
CGCCGCTCGGCTCCACCGGCGAGTTCGCCTATCTCGACCGCAACCAGCGCATGACGGTAGTGGAGACGACGATCGACGCG
GCGCAGGGCCGGGTGCCGGTCATCGCCGGCGTCGCCTCGACCGCCATCGCCGACGCGGTGGCCCAGGCCAGGGCCTATGA
GAAACGCGGAGCCGACGGCATTCTGGCCGTCCTCGAAGCCTATTTCCCGGTCAGCGACGCCGGCGTGGAGGCCTATTTCC
GTGCCATCGCCGATGCTGTCGACGTTCCCGTGGTGATCTACACCAACCCGCAGTTCCAGCGCTCCGACCTGTCGCTGGAC
GTCATCGCCCGGCTCGCCGAGCATCCGCGGATCAACTACATCAAGGATGCCTCGACCAACACCGGCCGACTGCTGTCGAT
CATCAATCGCTGCGGCGATGCCATCAAGGTGTTCGCGGCGTCGTCGCACATTCCGGCCGCTGTCATGATGATCGGCGGTC
ATGGCTGGATGGCGGGACCGGCCTGCATCATTCCGCGTCAGAGCGTGGAGCTGTATAATCTCTGCCAGGCGTCATGCTGG
GACGATGCGCTCGTGCTGCAGAAGAAGCTGTGGCGCGTCAATGAGGCGTTTGCCCGCTTCAATCTCGCCGCCTGCATCAA
GGCCGGACTGTCGATCCAGGGCTACGACGTCGGCGACCCCGTGCCGCCGCAGGCAGCGCTCACGGCAGAGCAGCGCAAGG
TGGTCGCAGAGGTGCTGCAAGGCCTAACGTGA

Upstream 100 bases:

>100_bases
TTAAAGCGCGATTTAACGGTGGCGGGTTGCCGTCGCAGATCTTGTGACGCTGACATGACAAGCGGCGTGTTCCGCCGATG
GCCCGTCGCGTGGCGCCGGC

Downstream 100 bases:

>100_bases
ACAAGGCCTAACGTGAATAAGGCCTGGCGTGAAAAAGGCCGTCAAGGCCGGGCTTGACCCAGCCATCCATGCCAGGAGGG
ACGGGGTTGTGGATGCGCGG

Product: putative dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRKRRTGRYTGQMTDFHGVFPYLASPIGTEGAIRTEVLGRLCDDLIHAGVHGLTPLGSTGEFAYLDRNQRMTVVETTIDA
AQGRVPVIAGVASTAIADAVAQARAYEKRGADGILAVLEAYFPVSDAGVEAYFRAIADAVDVPVVIYTNPQFQRSDLSLD
VIARLAEHPRINYIKDASTNTGRLLSIINRCGDAIKVFAASSHIPAAVMMIGGHGWMAGPACIIPRQSVELYNLCQASCW
DDALVLQKKLWRVNEAFARFNLAACIKAGLSIQGYDVGDPVPPQAALTAEQRKVVAEVLQGLT

Sequences:

>Translated_303_residues
MRKRRTGRYTGQMTDFHGVFPYLASPIGTEGAIRTEVLGRLCDDLIHAGVHGLTPLGSTGEFAYLDRNQRMTVVETTIDA
AQGRVPVIAGVASTAIADAVAQARAYEKRGADGILAVLEAYFPVSDAGVEAYFRAIADAVDVPVVIYTNPQFQRSDLSLD
VIARLAEHPRINYIKDASTNTGRLLSIINRCGDAIKVFAASSHIPAAVMMIGGHGWMAGPACIIPRQSVELYNLCQASCW
DDALVLQKKLWRVNEAFARFNLAACIKAGLSIQGYDVGDPVPPQAALTAEQRKVVAEVLQGLT
>Mature_303_residues
MRKRRTGRYTGQMTDFHGVFPYLASPIGTEGAIRTEVLGRLCDDLIHAGVHGLTPLGSTGEFAYLDRNQRMTVVETTIDA
AQGRVPVIAGVASTAIADAVAQARAYEKRGADGILAVLEAYFPVSDAGVEAYFRAIADAVDVPVVIYTNPQFQRSDLSLD
VIARLAEHPRINYIKDASTNTGRLLSIINRCGDAIKVFAASSHIPAAVMMIGGHGWMAGPACIIPRQSVELYNLCQASCW
DDALVLQKKLWRVNEAFARFNLAACIKAGLSIQGYDVGDPVPPQAALTAEQRKVVAEVLQGLT

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=255, Percent_Identity=26.6666666666667, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI87082415, Length=292, Percent_Identity=30.1369863013699, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1788823, Length=260, Percent_Identity=28.8461538461538, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1786463, Length=300, Percent_Identity=28, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789620, Length=212, Percent_Identity=27.8301886792453, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 32628; Mature: 32628

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRRTGRYTGQMTDFHGVFPYLASPIGTEGAIRTEVLGRLCDDLIHAGVHGLTPLGSTG
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EFAYLDRNQRMTVVETTIDAAQGRVPVIAGVASTAIADAVAQARAYEKRGADGILAVLEA
CEEEECCCCCEEEEEEHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YFPVSDAGVEAYFRAIADAVDVPVVIYTNPQFQRSDLSLDVIARLAEHPRINYIKDASTN
HCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEECCCCC
TGRLLSIINRCGDAIKVFAASSHIPAAVMMIGGHGWMAGPACIIPRQSVELYNLCQASCW
HHHHHHHHHHCCHHHEEEECCCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHCC
DDALVLQKKLWRVNEAFARFNLAACIKAGLSIQGYDVGDPVPPQAALTAEQRKVVAEVLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
GLT
CCC
>Mature Secondary Structure
MRKRRTGRYTGQMTDFHGVFPYLASPIGTEGAIRTEVLGRLCDDLIHAGVHGLTPLGSTG
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EFAYLDRNQRMTVVETTIDAAQGRVPVIAGVASTAIADAVAQARAYEKRGADGILAVLEA
CEEEECCCCCEEEEEEHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YFPVSDAGVEAYFRAIADAVDVPVVIYTNPQFQRSDLSLDVIARLAEHPRINYIKDASTN
HCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEECCCCC
TGRLLSIINRCGDAIKVFAASSHIPAAVMMIGGHGWMAGPACIIPRQSVELYNLCQASCW
HHHHHHHHHHCCHHHEEEECCCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHCC
DDALVLQKKLWRVNEAFARFNLAACIKAGLSIQGYDVGDPVPPQAALTAEQRKVVAEVLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
GLT
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA