| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338435
Identifier: 146338435
GI number: 146338435
Start: 1436691
End: 1437518
Strand: Direct
Name: 146338435
Synonym: BRADO1351
Alternate gene names: NA
Gene position: 1436691-1437518 (Clockwise)
Preceding gene: 146338433
Following gene: 146338436
Centisome position: 19.27
GC content: 65.34
Gene sequence:
>828_bases ATGATGGAGATCAAGGTCGGGTTCGAGATCGCCTATGCCGCGCCCGCGGCGACCCCGATGGTGATCATGCTGTCGATCCA TCCCTCGCGCCGCCAGGACCTCATCGGCAACGAGACCATCGTGACCGAGCCGGTGGTGCCGATCAGCTTCTACCACGACA GCTTCGGCAACATTTGCGGCCGGCTGGTGGCCCCGAGCGGCGGCGTCACCTTTCATGGCAGCGCCATCGTGCGCGACAGC GGGTTGCCCGATGCTGTCGAGCCGAAGGCGCAACAATTGCCGATCGACCAGCTGCCAGACGATCTGCTGCTGTATCTGAT GCCGAGCCGCTATTGCGAGACCGACAAGCTCACCGACGTCGCCTGGTCGCTGTTCGCCCAGGTGCCGGCGGGCTGGGCGC GGGTGCAGGCGATCTGCGATTTCGTCCACAAGCATGTCAGCTTCGGCTACGAGCACGCCCATCACATGAAGTCGGCGCAC GACGTCTATCAGCAGCGCACCGGCGTCTGCCGCGACTTCGCGCATCTGGCGCTGACCCTGTGCCGCTGCATGGGCATCCC CGCGCGCTATTGCACCGGCTACATGGGCGATATCGGCATTCCGCCGGAGCCTTATCCGATGGATTTCTCCGGCTGGTTTC AGGCCTATCTCTCTGGCCAGTGGTTCACCTTCGATGCCCGCCACAACACCCCGCGTATCGGCCGCATCCTGATGGCCACG GGCCGCGATGCCGCCGACGTCGCGCTGTCGACCTCGTTCGGCCGGATGACGCTGACCAAATTCCACGTCGTCAGCGACGA GATCGTGCCGGCCCGCGGCGCGGCGTGA
Upstream 100 bases:
>100_bases ATCGTCGAAAACCACGATGATGATTCGATGACGATGCCGGTCCCGGCGGTCGATCACAAGGCCTGATATTGCCAGGCCTG TGCACAGGCGGAAGAGGTGA
Downstream 100 bases:
>100_bases GCTGGCCTTGGCGCGCCGGTGCGGCTATGCAAGCGCCATGAGCTCCGATACGACCCCTGATCTATTGTTCGTCTACGGCA CCCTGATGCGCGGCTTCGAT
Product: cysteine protease transglutaminase-like protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase Family Protein; Transglutaminase-Like Protein; Transglutaminase-Like Domain-Containing Protein; Transglutaminase-Like Superfamily Protein; Cysteine Protease Transglutaminase-Like Protein; Transglutaminase-Like S Cysteine Proteases; Protease Transglutaminase-Like; Cysteine Protease; Transglutaminase/Protease-Like Protein; Transglutaminase/Protease; Transglutaminase-Like S Cysteine Protease; Transglutaminase-Like Cysteine Protease; Cystein Protease
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MMEIKVGFEIAYAAPAATPMVIMLSIHPSRRQDLIGNETIVTEPVVPISFYHDSFGNICGRLVAPSGGVTFHGSAIVRDS GLPDAVEPKAQQLPIDQLPDDLLLYLMPSRYCETDKLTDVAWSLFAQVPAGWARVQAICDFVHKHVSFGYEHAHHMKSAH DVYQQRTGVCRDFAHLALTLCRCMGIPARYCTGYMGDIGIPPEPYPMDFSGWFQAYLSGQWFTFDARHNTPRIGRILMAT GRDAADVALSTSFGRMTLTKFHVVSDEIVPARGAA
Sequences:
>Translated_275_residues MMEIKVGFEIAYAAPAATPMVIMLSIHPSRRQDLIGNETIVTEPVVPISFYHDSFGNICGRLVAPSGGVTFHGSAIVRDS GLPDAVEPKAQQLPIDQLPDDLLLYLMPSRYCETDKLTDVAWSLFAQVPAGWARVQAICDFVHKHVSFGYEHAHHMKSAH DVYQQRTGVCRDFAHLALTLCRCMGIPARYCTGYMGDIGIPPEPYPMDFSGWFQAYLSGQWFTFDARHNTPRIGRILMAT GRDAADVALSTSFGRMTLTKFHVVSDEIVPARGAA >Mature_275_residues MMEIKVGFEIAYAAPAATPMVIMLSIHPSRRQDLIGNETIVTEPVVPISFYHDSFGNICGRLVAPSGGVTFHGSAIVRDS GLPDAVEPKAQQLPIDQLPDDLLLYLMPSRYCETDKLTDVAWSLFAQVPAGWARVQAICDFVHKHVSFGYEHAHHMKSAH DVYQQRTGVCRDFAHLALTLCRCMGIPARYCTGYMGDIGIPPEPYPMDFSGWFQAYLSGQWFTFDARHNTPRIGRILMAT GRDAADVALSTSFGRMTLTKFHVVSDEIVPARGAA
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30391; Mature: 30391
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEIKVGFEIAYAAPAATPMVIMLSIHPSRRQDLIGNETIVTEPVVPISFYHDSFGNICG CEEEEECEEEEECCCCCCCEEEEEEECCCHHHHCCCCCEEEECCCCEEEEHHHHHHHHHH RLVAPSGGVTFHGSAIVRDSGLPDAVEPKAQQLPIDQLPDDLLLYLMPSRYCETDKLTDV HHCCCCCCEEECCCEEEECCCCCCCCCCHHHCCCHHHCCHHHHHHHCCCCCCCCCHHHHH AWSLFAQVPAGWARVQAICDFVHKHVSFGYEHAHHMKSAHDVYQQRTGVCRDFAHLALTL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRCMGIPARYCTGYMGDIGIPPEPYPMDFSGWFQAYLSGQWFTFDARHNTPRIGRILMAT HHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEC GRDAADVALSTSFGRMTLTKFHVVSDEIVPARGAA CCCHHHHEEECCCCCEEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MMEIKVGFEIAYAAPAATPMVIMLSIHPSRRQDLIGNETIVTEPVVPISFYHDSFGNICG CEEEEECEEEEECCCCCCCEEEEEEECCCHHHHCCCCCEEEECCCCEEEEHHHHHHHHHH RLVAPSGGVTFHGSAIVRDSGLPDAVEPKAQQLPIDQLPDDLLLYLMPSRYCETDKLTDV HHCCCCCCEEECCCEEEECCCCCCCCCCHHHCCCHHHCCHHHHHHHCCCCCCCCCHHHHH AWSLFAQVPAGWARVQAICDFVHKHVSFGYEHAHHMKSAHDVYQQRTGVCRDFAHLALTL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRCMGIPARYCTGYMGDIGIPPEPYPMDFSGWFQAYLSGQWFTFDARHNTPRIGRILMAT HHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEC GRDAADVALSTSFGRMTLTKFHVVSDEIVPARGAA CCCHHHHEEECCCCCEEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA