Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is cya3 [H]

Identifier: 146338344

GI number: 146338344

Start: 1337196

End: 1338926

Strand: Reverse

Name: cya3 [H]

Synonym: BRADO1252

Alternate gene names: 146338344

Gene position: 1338926-1337196 (Counterclockwise)

Preceding gene: 146338350

Following gene: 146338343

Centisome position: 17.96

GC content: 61.47

Gene sequence:

>1731_bases
ATGGCGTGTGAAAAAACCGTGAAGCTCCTTGAGCGGCACAACCATAGTGCTAGAGTTCGGAAAACTTCGCTCGACGGAGT
GCCTTTCGTGGACGGCAAACGCATCGAGATTGGCCTGTTCGGCGCCTGTGTCGTGCGCTCCGCTGGCGCTGGTGGCTTCG
AAATCACGGGCGCGAAGCACAAGGCCCTGTTTGCCCTGCTCGCCACGGCCCCGTTGGGACGCCGAACGCGGTCCTTCCTC
CAGGATACGCTATGGGGGACCGCTTGCTACGACACCGGACGTCAAAGCCTTCGCAGGGCACTGTCGGATATCAAGCAAAT
CATGGGAGAGGCCTTTTCCGAGGTGTTGACGAACACCAACTCGGATGTCTCGCTCGATCTGAGCAAGGTCTCCTTCGTTG
GAAGACCTGGCGCCGGCGAATTGTTGGAAGGGATCAACATCCGCGAGAGCGGCTTCGTTCGCTGGCTCGATGCGATGCGT
CTCAATCCTGAGCAGATCTATTCGCTCTATAGCGTTCGGTCGCAACCGCCGCCGCCGCCAATGCTTCCCGCAATTTCGGT
GCTGCCGTTTCGCACGATCGGAGGCTCTCCCGATGACGCCGTGCTTGGCGATTGGCTTGCGGAGGAAGCTTGCCGCTCGC
TGTCGCGATCGAACCTGATTGCGGTGATCTCACACTGGTCGAGCCGATCGATCAATGTTCAAATGGTCGACGTTGCGACG
ATCCGAGAGCGTCTCGCCGTCGACTATTGCGTCGCCGGCACACTGCGCATCCGCGGAGATGAGATCGTGCTCGATGCCGA
TTTCCTCGACGTGGTATCCGGCCGCATTCTCTGGACGCGGCAGTTCCTGGGCGGTCTCAATAGCTTTCTCGGGCGAACGT
CGGAAGGCGTGTCCGAGATTGTGACCGCGGTCGGACGTACCATCGCGGACGACGCGATCGCCCATGTCTCCGATCGGCGA
TTGACCGAGGTGGCCGATCATCGCCTGCTGCTCGCCGGCGTCGGTCTGATGCATCGTCCGTCGTTGCGGGCCTTCGCTCG
TTCCCGTGACCTCATCGAAGAGGCGCTCCGACGCGCGCCGCATGCGGCTGAGGCTCACGCATGGCACGGCAAGTGGCATG
TGCTCAGCGTGTTCAATGGCTGGAGCACGGATCCGGCTAAGGACACCCAGCATGCGATCGACTGTACGGCGCGTGCGCTC
GACATCAACCCGGAGAGCGCCTTTGCTTTGACCATCGATGGCTTCGCGCATAATAATCTTTTGCGCAGAATGGACGTTGC
CGGTGATCGCTACAATGCCGCGCTGAAACGCAATCCGAATGAATCACTCGCGTGGCTCATGAGAAGCGCGCTGCATGCGT
TCCGCGACGAGCCGGACGCAGCCGTCGTTGCCGCCGAGAAAGCGCGCCGGCTCTCGCCGATCGATCCGTTTCAATATTAC
TACGAATCCCTAAGCGCGACGGCCTTGTTTGCCGCCGACCGTTATGGGGAGGCGCTGGACCTCGCGGAGCGGTCCCTGCT
CCGGCACGATCGCCATGTCTCGACGCTGCGGGCCAAGACAGCCTCACTGTATTGCCTCGGCCGCGTGGAGGAAGCCAGGA
TTGCCGCGGCTGAAATTCTTCGGCGGCAGCCGGACTTCACGGTTGAGACCTATCTGCGCGGGCATCCGGCAGGAGATTAT
GAGTTCGGGCGCCGAGTGGCCGCTGCGCTCAAAGGTGCAGGCATTCCGTAA

Upstream 100 bases:

>100_bases
CGCGGCGGCGTACGGCCCGCCGTGCCGCCGTCTCCATCGAATGACCCGGGATCGTCTGCGCCAGCGCCCATCGGAGCAAG
GCTAGTCTGCCTCCGAGGCT

Downstream 100 bases:

>100_bases
AAAAGCAATTTGGGGGGGGCAGAGATGAGTCAGTTAGGTGGTATGGGTGGTATGGGTGGTATGGGCGGTATGGGCGGCAT
GGGCGGCATGGGCGGCATGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MACEKTVKLLERHNHSARVRKTSLDGVPFVDGKRIEIGLFGACVVRSAGAGGFEITGAKHKALFALLATAPLGRRTRSFL
QDTLWGTACYDTGRQSLRRALSDIKQIMGEAFSEVLTNTNSDVSLDLSKVSFVGRPGAGELLEGINIRESGFVRWLDAMR
LNPEQIYSLYSVRSQPPPPPMLPAISVLPFRTIGGSPDDAVLGDWLAEEACRSLSRSNLIAVISHWSSRSINVQMVDVAT
IRERLAVDYCVAGTLRIRGDEIVLDADFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEIVTAVGRTIADDAIAHVSDRR
LTEVADHRLLLAGVGLMHRPSLRAFARSRDLIEEALRRAPHAAEAHAWHGKWHVLSVFNGWSTDPAKDTQHAIDCTARAL
DINPESAFALTIDGFAHNNLLRRMDVAGDRYNAALKRNPNESLAWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYY
YESLSATALFAADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEEARIAAAEILRRQPDFTVETYLRGHPAGDY
EFGRRVAAALKGAGIP

Sequences:

>Translated_576_residues
MACEKTVKLLERHNHSARVRKTSLDGVPFVDGKRIEIGLFGACVVRSAGAGGFEITGAKHKALFALLATAPLGRRTRSFL
QDTLWGTACYDTGRQSLRRALSDIKQIMGEAFSEVLTNTNSDVSLDLSKVSFVGRPGAGELLEGINIRESGFVRWLDAMR
LNPEQIYSLYSVRSQPPPPPMLPAISVLPFRTIGGSPDDAVLGDWLAEEACRSLSRSNLIAVISHWSSRSINVQMVDVAT
IRERLAVDYCVAGTLRIRGDEIVLDADFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEIVTAVGRTIADDAIAHVSDRR
LTEVADHRLLLAGVGLMHRPSLRAFARSRDLIEEALRRAPHAAEAHAWHGKWHVLSVFNGWSTDPAKDTQHAIDCTARAL
DINPESAFALTIDGFAHNNLLRRMDVAGDRYNAALKRNPNESLAWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYY
YESLSATALFAADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEEARIAAAEILRRQPDFTVETYLRGHPAGDY
EFGRRVAAALKGAGIP
>Mature_575_residues
ACEKTVKLLERHNHSARVRKTSLDGVPFVDGKRIEIGLFGACVVRSAGAGGFEITGAKHKALFALLATAPLGRRTRSFLQ
DTLWGTACYDTGRQSLRRALSDIKQIMGEAFSEVLTNTNSDVSLDLSKVSFVGRPGAGELLEGINIRESGFVRWLDAMRL
NPEQIYSLYSVRSQPPPPPMLPAISVLPFRTIGGSPDDAVLGDWLAEEACRSLSRSNLIAVISHWSSRSINVQMVDVATI
RERLAVDYCVAGTLRIRGDEIVLDADFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEIVTAVGRTIADDAIAHVSDRRL
TEVADHRLLLAGVGLMHRPSLRAFARSRDLIEEALRRAPHAAEAHAWHGKWHVLSVFNGWSTDPAKDTQHAIDCTARALD
INPESAFALTIDGFAHNNLLRRMDVAGDRYNAALKRNPNESLAWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYYY
ESLSATALFAADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEEARIAAAEILRRQPDFTVETYLRGHPAGDYE
FGRRVAAALKGAGIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 63409; Mature: 63278

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS50293 TPR_REGION ; PS00191 CYTOCHROME_B5_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACEKTVKLLERHNHSARVRKTSLDGVPFVDGKRIEIGLFGACVVRSAGAGGFEITGAKH
CCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCEEECCCHH
KALFALLATAPLGRRTRSFLQDTLWGTACYDTGRQSLRRALSDIKQIMGEAFSEVLTNTN
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SDVSLDLSKVSFVGRPGAGELLEGINIRESGFVRWLDAMRLNPEQIYSLYSVRSQPPPPP
CCEEEEHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
MLPAISVLPFRTIGGSPDDAVLGDWLAEEACRSLSRSNLIAVISHWSSRSINVQMVDVAT
CCCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEHHHH
IRERLAVDYCVAGTLRIRGDEIVLDADFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEI
HHHHHHHHHHEECEEEEECCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH
VTAVGRTIADDAIAHVSDRRLTEVADHRLLLAGVGLMHRPSLRAFARSRDLIEEALRRAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCC
HAAEAHAWHGKWHVLSVFNGWSTDPAKDTQHAIDCTARALDINPESAFALTIDGFAHNNL
CCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHEEEECCCCCEEEEEECCHHHHHH
LRRMDVAGDRYNAALKRNPNESLAWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYY
HHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCHHHHH
YESLSATALFAADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEEARIAAAEIL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHH
RRQPDFTVETYLRGHPAGDYEFGRRVAAALKGAGIP
HCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ACEKTVKLLERHNHSARVRKTSLDGVPFVDGKRIEIGLFGACVVRSAGAGGFEITGAKH
CHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCEEECCCHH
KALFALLATAPLGRRTRSFLQDTLWGTACYDTGRQSLRRALSDIKQIMGEAFSEVLTNTN
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SDVSLDLSKVSFVGRPGAGELLEGINIRESGFVRWLDAMRLNPEQIYSLYSVRSQPPPPP
CCEEEEHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
MLPAISVLPFRTIGGSPDDAVLGDWLAEEACRSLSRSNLIAVISHWSSRSINVQMVDVAT
CCCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEHHHH
IRERLAVDYCVAGTLRIRGDEIVLDADFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEI
HHHHHHHHHHEECEEEEECCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH
VTAVGRTIADDAIAHVSDRRLTEVADHRLLLAGVGLMHRPSLRAFARSRDLIEEALRRAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCC
HAAEAHAWHGKWHVLSVFNGWSTDPAKDTQHAIDCTARALDINPESAFALTIDGFAHNNL
CCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHEEEECCCCCEEEEEECCHHHHHH
LRRMDVAGDRYNAALKRNPNESLAWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYY
HHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCHHHHH
YESLSATALFAADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEEARIAAAEIL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHH
RRQPDFTVETYLRGHPAGDYEFGRRVAAALKGAGIP
HCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]