| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is cya3 [H]
Identifier: 146338344
GI number: 146338344
Start: 1337196
End: 1338926
Strand: Reverse
Name: cya3 [H]
Synonym: BRADO1252
Alternate gene names: 146338344
Gene position: 1338926-1337196 (Counterclockwise)
Preceding gene: 146338350
Following gene: 146338343
Centisome position: 17.96
GC content: 61.47
Gene sequence:
>1731_bases ATGGCGTGTGAAAAAACCGTGAAGCTCCTTGAGCGGCACAACCATAGTGCTAGAGTTCGGAAAACTTCGCTCGACGGAGT GCCTTTCGTGGACGGCAAACGCATCGAGATTGGCCTGTTCGGCGCCTGTGTCGTGCGCTCCGCTGGCGCTGGTGGCTTCG AAATCACGGGCGCGAAGCACAAGGCCCTGTTTGCCCTGCTCGCCACGGCCCCGTTGGGACGCCGAACGCGGTCCTTCCTC CAGGATACGCTATGGGGGACCGCTTGCTACGACACCGGACGTCAAAGCCTTCGCAGGGCACTGTCGGATATCAAGCAAAT CATGGGAGAGGCCTTTTCCGAGGTGTTGACGAACACCAACTCGGATGTCTCGCTCGATCTGAGCAAGGTCTCCTTCGTTG GAAGACCTGGCGCCGGCGAATTGTTGGAAGGGATCAACATCCGCGAGAGCGGCTTCGTTCGCTGGCTCGATGCGATGCGT CTCAATCCTGAGCAGATCTATTCGCTCTATAGCGTTCGGTCGCAACCGCCGCCGCCGCCAATGCTTCCCGCAATTTCGGT GCTGCCGTTTCGCACGATCGGAGGCTCTCCCGATGACGCCGTGCTTGGCGATTGGCTTGCGGAGGAAGCTTGCCGCTCGC TGTCGCGATCGAACCTGATTGCGGTGATCTCACACTGGTCGAGCCGATCGATCAATGTTCAAATGGTCGACGTTGCGACG ATCCGAGAGCGTCTCGCCGTCGACTATTGCGTCGCCGGCACACTGCGCATCCGCGGAGATGAGATCGTGCTCGATGCCGA TTTCCTCGACGTGGTATCCGGCCGCATTCTCTGGACGCGGCAGTTCCTGGGCGGTCTCAATAGCTTTCTCGGGCGAACGT CGGAAGGCGTGTCCGAGATTGTGACCGCGGTCGGACGTACCATCGCGGACGACGCGATCGCCCATGTCTCCGATCGGCGA TTGACCGAGGTGGCCGATCATCGCCTGCTGCTCGCCGGCGTCGGTCTGATGCATCGTCCGTCGTTGCGGGCCTTCGCTCG TTCCCGTGACCTCATCGAAGAGGCGCTCCGACGCGCGCCGCATGCGGCTGAGGCTCACGCATGGCACGGCAAGTGGCATG TGCTCAGCGTGTTCAATGGCTGGAGCACGGATCCGGCTAAGGACACCCAGCATGCGATCGACTGTACGGCGCGTGCGCTC GACATCAACCCGGAGAGCGCCTTTGCTTTGACCATCGATGGCTTCGCGCATAATAATCTTTTGCGCAGAATGGACGTTGC CGGTGATCGCTACAATGCCGCGCTGAAACGCAATCCGAATGAATCACTCGCGTGGCTCATGAGAAGCGCGCTGCATGCGT TCCGCGACGAGCCGGACGCAGCCGTCGTTGCCGCCGAGAAAGCGCGCCGGCTCTCGCCGATCGATCCGTTTCAATATTAC TACGAATCCCTAAGCGCGACGGCCTTGTTTGCCGCCGACCGTTATGGGGAGGCGCTGGACCTCGCGGAGCGGTCCCTGCT CCGGCACGATCGCCATGTCTCGACGCTGCGGGCCAAGACAGCCTCACTGTATTGCCTCGGCCGCGTGGAGGAAGCCAGGA TTGCCGCGGCTGAAATTCTTCGGCGGCAGCCGGACTTCACGGTTGAGACCTATCTGCGCGGGCATCCGGCAGGAGATTAT GAGTTCGGGCGCCGAGTGGCCGCTGCGCTCAAAGGTGCAGGCATTCCGTAA
Upstream 100 bases:
>100_bases CGCGGCGGCGTACGGCCCGCCGTGCCGCCGTCTCCATCGAATGACCCGGGATCGTCTGCGCCAGCGCCCATCGGAGCAAG GCTAGTCTGCCTCCGAGGCT
Downstream 100 bases:
>100_bases AAAAGCAATTTGGGGGGGGCAGAGATGAGTCAGTTAGGTGGTATGGGTGGTATGGGTGGTATGGGCGGTATGGGCGGCAT GGGCGGCATGGGCGGCATGG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 576; Mature: 575
Protein sequence:
>576_residues MACEKTVKLLERHNHSARVRKTSLDGVPFVDGKRIEIGLFGACVVRSAGAGGFEITGAKHKALFALLATAPLGRRTRSFL QDTLWGTACYDTGRQSLRRALSDIKQIMGEAFSEVLTNTNSDVSLDLSKVSFVGRPGAGELLEGINIRESGFVRWLDAMR LNPEQIYSLYSVRSQPPPPPMLPAISVLPFRTIGGSPDDAVLGDWLAEEACRSLSRSNLIAVISHWSSRSINVQMVDVAT IRERLAVDYCVAGTLRIRGDEIVLDADFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEIVTAVGRTIADDAIAHVSDRR LTEVADHRLLLAGVGLMHRPSLRAFARSRDLIEEALRRAPHAAEAHAWHGKWHVLSVFNGWSTDPAKDTQHAIDCTARAL DINPESAFALTIDGFAHNNLLRRMDVAGDRYNAALKRNPNESLAWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYY YESLSATALFAADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEEARIAAAEILRRQPDFTVETYLRGHPAGDY EFGRRVAAALKGAGIP
Sequences:
>Translated_576_residues MACEKTVKLLERHNHSARVRKTSLDGVPFVDGKRIEIGLFGACVVRSAGAGGFEITGAKHKALFALLATAPLGRRTRSFL QDTLWGTACYDTGRQSLRRALSDIKQIMGEAFSEVLTNTNSDVSLDLSKVSFVGRPGAGELLEGINIRESGFVRWLDAMR LNPEQIYSLYSVRSQPPPPPMLPAISVLPFRTIGGSPDDAVLGDWLAEEACRSLSRSNLIAVISHWSSRSINVQMVDVAT IRERLAVDYCVAGTLRIRGDEIVLDADFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEIVTAVGRTIADDAIAHVSDRR LTEVADHRLLLAGVGLMHRPSLRAFARSRDLIEEALRRAPHAAEAHAWHGKWHVLSVFNGWSTDPAKDTQHAIDCTARAL DINPESAFALTIDGFAHNNLLRRMDVAGDRYNAALKRNPNESLAWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYY YESLSATALFAADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEEARIAAAEILRRQPDFTVETYLRGHPAGDY EFGRRVAAALKGAGIP >Mature_575_residues ACEKTVKLLERHNHSARVRKTSLDGVPFVDGKRIEIGLFGACVVRSAGAGGFEITGAKHKALFALLATAPLGRRTRSFLQ DTLWGTACYDTGRQSLRRALSDIKQIMGEAFSEVLTNTNSDVSLDLSKVSFVGRPGAGELLEGINIRESGFVRWLDAMRL NPEQIYSLYSVRSQPPPPPMLPAISVLPFRTIGGSPDDAVLGDWLAEEACRSLSRSNLIAVISHWSSRSINVQMVDVATI RERLAVDYCVAGTLRIRGDEIVLDADFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEIVTAVGRTIADDAIAHVSDRRL TEVADHRLLLAGVGLMHRPSLRAFARSRDLIEEALRRAPHAAEAHAWHGKWHVLSVFNGWSTDPAKDTQHAIDCTARALD INPESAFALTIDGFAHNNLLRRMDVAGDRYNAALKRNPNESLAWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYYY ESLSATALFAADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEEARIAAAEILRRQPDFTVETYLRGHPAGDYE FGRRVAAALKGAGIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 63409; Mature: 63278
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS50293 TPR_REGION ; PS00191 CYTOCHROME_B5_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACEKTVKLLERHNHSARVRKTSLDGVPFVDGKRIEIGLFGACVVRSAGAGGFEITGAKH CCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCEEECCCHH KALFALLATAPLGRRTRSFLQDTLWGTACYDTGRQSLRRALSDIKQIMGEAFSEVLTNTN HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SDVSLDLSKVSFVGRPGAGELLEGINIRESGFVRWLDAMRLNPEQIYSLYSVRSQPPPPP CCEEEEHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC MLPAISVLPFRTIGGSPDDAVLGDWLAEEACRSLSRSNLIAVISHWSSRSINVQMVDVAT CCCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEHHHH IRERLAVDYCVAGTLRIRGDEIVLDADFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEI HHHHHHHHHHEECEEEEECCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH VTAVGRTIADDAIAHVSDRRLTEVADHRLLLAGVGLMHRPSLRAFARSRDLIEEALRRAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCC HAAEAHAWHGKWHVLSVFNGWSTDPAKDTQHAIDCTARALDINPESAFALTIDGFAHNNL CCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHEEEECCCCCEEEEEECCHHHHHH LRRMDVAGDRYNAALKRNPNESLAWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYY HHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCHHHHH YESLSATALFAADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEEARIAAAEIL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHH RRQPDFTVETYLRGHPAGDYEFGRRVAAALKGAGIP HCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure ACEKTVKLLERHNHSARVRKTSLDGVPFVDGKRIEIGLFGACVVRSAGAGGFEITGAKH CHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCEEECCCHH KALFALLATAPLGRRTRSFLQDTLWGTACYDTGRQSLRRALSDIKQIMGEAFSEVLTNTN HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SDVSLDLSKVSFVGRPGAGELLEGINIRESGFVRWLDAMRLNPEQIYSLYSVRSQPPPPP CCEEEEHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC MLPAISVLPFRTIGGSPDDAVLGDWLAEEACRSLSRSNLIAVISHWSSRSINVQMVDVAT CCCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEHHHH IRERLAVDYCVAGTLRIRGDEIVLDADFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEI HHHHHHHHHHEECEEEEECCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH VTAVGRTIADDAIAHVSDRRLTEVADHRLLLAGVGLMHRPSLRAFARSRDLIEEALRRAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCC HAAEAHAWHGKWHVLSVFNGWSTDPAKDTQHAIDCTARALDINPESAFALTIDGFAHNNL CCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHEEEECCCCCEEEEEECCHHHHHH LRRMDVAGDRYNAALKRNPNESLAWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYY HHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCHHHHH YESLSATALFAADRYGEALDLAERSLLRHDRHVSTLRAKTASLYCLGRVEEARIAAAEIL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHH RRQPDFTVETYLRGHPAGDYEFGRRVAAALKGAGIP HCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]