| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338321
Identifier: 146338321
GI number: 146338321
Start: 1304068
End: 1304949
Strand: Reverse
Name: 146338321
Synonym: BRADO1226
Alternate gene names: NA
Gene position: 1304949-1304068 (Counterclockwise)
Preceding gene: 146338322
Following gene: 146338320
Centisome position: 17.5
GC content: 66.21
Gene sequence:
>882_bases ATGCTGCTCGCCTTCAAGATCAAGATCGCCCTCGCCTGCCTCGTCGGCATCGCCGGCCCGACCGCCATCGTGCCGATCGT CGGCAGACTGCAAGATCCCGTCGCCGATTTTGCTGAGCCGGCGCTGGTCGAGATCGCGCCCGGACGGATCAACTACCGCG ACTCCGGCGATTACATTCGCGATGGCCGCCAGGCCGAGGCACCGATCACCGCCCTTCGATTCGATCGCGCATTGACGATC ATGATTCATCAGGTGAGCGCTGCCGACTACCAGGCCTGCGTCGAAGCCAACGCCTGCCGCATGCTCGACCGTGATGTCCC GGTCGCCATGGACCGCCCGGCCGTGCAGGTGAGCTGGCTCGATGCGAGCGCCTATGCCGACTGGCTGTCACTCAAGACCG GACAACGCTATCGACTGCCGACCGATGCCGAGTGGGCTTTTGCAGCCGGCAGCCGCTTCAAGGATGACGGCCTTTCGGTC GACGATGCCGATCCGTCGCGTCGCTGGATCGCCCGATACGAGCGCGAGTCCGCCTTACCCGACGATCCGAACCCGCGCAG CTTCGGCGGCTTCGGCAAGAATGAGCATGGCGTTGCCGATCTGGCGGGCAATGTCTGGGAATGGACGTCGACGTGCTTCA CCCGCAAGGTGCAGGATGGTTCCGGACGCGTCGTCAAGACCGTCAACAATTGCGGTGTCCGCCTGGCCGAAGGGGCGCAT CGTGCCTATGTGACGGACTTCATCCGTGACGCGCGCGCCGGCGGCTGCGCCTCGGGCCGGCCCCCGGCCAATCTGGGCTT CCGCCTGATCCGCGAGCAGCCCGCGTGGAGCCGAGACCTCCCGCAGCGGCTGAGCCGTTTGATGCGCACCTTCCGCGCCT GA
Upstream 100 bases:
>100_bases GACGCAGGTCAGGGCGCCGGCCGACATTCCGACCGGCTCGACCAACTGATCGGATCAGGGGGCCGGCGCGACCGGCCCCC GCACTTCTCGATGTGCTGCC
Downstream 100 bases:
>100_bases CCGCGAAACCTCCTCTGCAACAGCCCAGGGATCAGCGCCAGCTGCGCCGGTGCCCTGGGACTGGCACAAATGCCAGTCAC GCAAAATCAACTTTCGGTTG
Product: putative nitrate reductase, nirV-like signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MLLAFKIKIALACLVGIAGPTAIVPIVGRLQDPVADFAEPALVEIAPGRINYRDSGDYIRDGRQAEAPITALRFDRALTI MIHQVSAADYQACVEANACRMLDRDVPVAMDRPAVQVSWLDASAYADWLSLKTGQRYRLPTDAEWAFAAGSRFKDDGLSV DDADPSRRWIARYERESALPDDPNPRSFGGFGKNEHGVADLAGNVWEWTSTCFTRKVQDGSGRVVKTVNNCGVRLAEGAH RAYVTDFIRDARAGGCASGRPPANLGFRLIREQPAWSRDLPQRLSRLMRTFRA
Sequences:
>Translated_293_residues MLLAFKIKIALACLVGIAGPTAIVPIVGRLQDPVADFAEPALVEIAPGRINYRDSGDYIRDGRQAEAPITALRFDRALTI MIHQVSAADYQACVEANACRMLDRDVPVAMDRPAVQVSWLDASAYADWLSLKTGQRYRLPTDAEWAFAAGSRFKDDGLSV DDADPSRRWIARYERESALPDDPNPRSFGGFGKNEHGVADLAGNVWEWTSTCFTRKVQDGSGRVVKTVNNCGVRLAEGAH RAYVTDFIRDARAGGCASGRPPANLGFRLIREQPAWSRDLPQRLSRLMRTFRA >Mature_293_residues MLLAFKIKIALACLVGIAGPTAIVPIVGRLQDPVADFAEPALVEIAPGRINYRDSGDYIRDGRQAEAPITALRFDRALTI MIHQVSAADYQACVEANACRMLDRDVPVAMDRPAVQVSWLDASAYADWLSLKTGQRYRLPTDAEWAFAAGSRFKDDGLSV DDADPSRRWIARYERESALPDDPNPRSFGGFGKNEHGVADLAGNVWEWTSTCFTRKVQDGSGRVVKTVNNCGVRLAEGAH RAYVTDFIRDARAGGCASGRPPANLGFRLIREQPAWSRDLPQRLSRLMRTFRA
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32323; Mature: 32323
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAFKIKIALACLVGIAGPTAIVPIVGRLQDPVADFAEPALVEIAPGRINYRDSGDYIR CEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCHHH DGRQAEAPITALRFDRALTIMIHQVSAADYQACVEANACRMLDRDVPVAMDRPAVQVSWL CCCCCCCCCHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEE DASAYADWLSLKTGQRYRLPTDAEWAFAAGSRFKDDGLSVDDADPSRRWIARYERESALP CHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC DDPNPRSFGGFGKNEHGVADLAGNVWEWTSTCFTRKVQDGSGRVVKTVNNCGVRLAEGAH CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHEECCCCCEEEECCCCCEEECCCCH RAYVTDFIRDARAGGCASGRPPANLGFRLIREQPAWSRDLPQRLSRLMRTFRA HHHHHHHHHHHCCCCCCCCCCCHHHCHHEECCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLLAFKIKIALACLVGIAGPTAIVPIVGRLQDPVADFAEPALVEIAPGRINYRDSGDYIR CEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCHHH DGRQAEAPITALRFDRALTIMIHQVSAADYQACVEANACRMLDRDVPVAMDRPAVQVSWL CCCCCCCCCHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEE DASAYADWLSLKTGQRYRLPTDAEWAFAAGSRFKDDGLSVDDADPSRRWIARYERESALP CHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC DDPNPRSFGGFGKNEHGVADLAGNVWEWTSTCFTRKVQDGSGRVVKTVNNCGVRLAEGAH CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHEECCCCCEEEECCCCCEEECCCCH RAYVTDFIRDARAGGCASGRPPANLGFRLIREQPAWSRDLPQRLSRLMRTFRA HHHHHHHHHHHCCCCCCCCCCCHHHCHHEECCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA