| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338320
Identifier: 146338320
GI number: 146338320
Start: 1302181
End: 1303899
Strand: Reverse
Name: 146338320
Synonym: BRADO1225
Alternate gene names: NA
Gene position: 1303899-1302181 (Counterclockwise)
Preceding gene: 146338321
Following gene: 146338317
Centisome position: 17.49
GC content: 66.26
Gene sequence:
>1719_bases GTGGTTTCTCGACATCCGCCGGTGTTCTTCACGTCCGACCTCCATGGCTATGGGATCGGCAACACCAGCTGGTTCGATGA CAATTCCCCCCGCGCGCTGGCGGGACGCTGTCTGATCGACGCGCTCGAATATCTGCGAACCTCGTCGAAGTTCGCCGCCA GAGACTGGCATGTCGTGAATGCCAACGCGGCGCGGATCGTCCACCATTGTCTTGCCGATCCGGCGCTGGCGCGCCACGAC ATGCTCGGTCACGTGGCGCCGGCCATCGAAGAGATCTGCGGACGAATCGTCGCCAGCCGTCAATATCGCATCCCGTTCTA CGGCGAGGATTTCTGGGATTGGGCCAGCGTCGTCGACGCGTTCTGCGAGGTGCAGAATCTTTCGCCAACCGCAGAGCGGG TGGCCAGACGCGAGCTGGACCAGTTTCGCAGAACCGTTCACATCCGGATGCCCGGTGGGTTGTCGGTTGGCGATCCCGAT CAGGAATGGTTTGGGCCGGCGATCGCAACGCGGGCTCATCACCTGCTGGATACGCGCATGTCGGGCTTCGACCCTGATCT GCGCCACGAGTTGCAAGCCCAGGCGCTCGAACGAATCGAGCGCGGCAGATATCGCGGCCGTCCGGTGCTGCCATGGCAGG TCAATTGGCACCACGGTCAGGTTGTCGCCGAGTTTCAACGGGCGGCGAGCGAGCAGGCGGCGGAGCTGGCTGATTTCGCA TGGCTCGCAGTCCCCGTCGAACCCGGCAAGCGCGCGCTTGTGCTTGCGCGCATCCTGCAGGGGGCCGGTGCCGTCAAGGA CCGACGAACGGTGCTGCAGACGCTGGAAGAGCTCTATCGGTGCGAGACGCCGGGCCGGCCGCTCGGGCAAGGCGTGATCG GCGCCAGCATCGAGGCCTCGCTCGACGTGCTGGAGGCACTCTGGCTGCAGCTCGAGGATCGCGACAAGTCGAGCCTCAAC GCGATGCTCGAGGCGCTGCGCTTCCTCCACGCCAAGGCCCATACGATCGGCTTCGTCGTCGAGACCGCCGAGGACATCGA GCGGCTGATCCAGGCCATGGGGCCGGGCACGCTGATCGAGCAGCGCAATGCCGCGCGCGCCATCATCAGGCACGCCAGCT TCCATGCGGTGATCTGCCTGGGCCGTTCGATGACGGAGGTGGCAAGCGCCACGTCGGTCGCGATCGAGGAGCATGGTGCG CGCTGGGTGATCATGCCGGGACGGGCCCATCCGCTGGGCCCCGTGCTTTCGCAAGCCGGCGAGGGCGCCCGCTTCGTCGG CGCCGGTCCGGGTGATCTCGTCATCGTCAGCGCCTTGGCGTCATTCCGGATCGAGATGAAGTTGCGCGATGCGCTCAGCA TCGCCGAGCCGCCGTTTCCCGATGACGGGGGCATGATCATTCCCGCCGATCCCGCGCTTTGCCGACTCGCGCATGATTCC GCGGCCAAGATGCTCAATGCGGGCGGCGTATTCTTCGAAGGGGTGACGGTCACACGCGATGACGGCGGCACGGAGGCCGA GATCGCGGCGGCGTTTCCCGGTGCCCTCGCCACCGATGGAAGTGCCTATGCGGTGGGGCTGATCTGTCTCAACCGCGGCG TGCCCTGCCTGGTCATCCAGAGCTTGACGGGAACGACGCCTGGTCCGAGGAGCCCCGGCCACGACTCGGCATGCCGTCTC GCGGTCAGGGTCGCGGAGATGCTGTGCCGGGGCTGGTAG
Upstream 100 bases:
>100_bases AATGCCAGTCACGCAAAATCAACTTTCGGTTGCGAGACTGAGTCTACAAACGTTACACAATTGCCGTTGAGAGACGCGAT GAGCGGGCCAGGAGGCGAGT
Downstream 100 bases:
>100_bases CGCCTCAGGTGTTCTTCAGCGCGACGCGGAATTCAGCCTCGGTCTTCGCCTTGACCTCGTCGAGCGTCACGCCGTCGGCG AGCTCGATCAGCGCCATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MVSRHPPVFFTSDLHGYGIGNTSWFDDNSPRALAGRCLIDALEYLRTSSKFAARDWHVVNANAARIVHHCLADPALARHD MLGHVAPAIEEICGRIVASRQYRIPFYGEDFWDWASVVDAFCEVQNLSPTAERVARRELDQFRRTVHIRMPGGLSVGDPD QEWFGPAIATRAHHLLDTRMSGFDPDLRHELQAQALERIERGRYRGRPVLPWQVNWHHGQVVAEFQRAASEQAAELADFA WLAVPVEPGKRALVLARILQGAGAVKDRRTVLQTLEELYRCETPGRPLGQGVIGASIEASLDVLEALWLQLEDRDKSSLN AMLEALRFLHAKAHTIGFVVETAEDIERLIQAMGPGTLIEQRNAARAIIRHASFHAVICLGRSMTEVASATSVAIEEHGA RWVIMPGRAHPLGPVLSQAGEGARFVGAGPGDLVIVSALASFRIEMKLRDALSIAEPPFPDDGGMIIPADPALCRLAHDS AAKMLNAGGVFFEGVTVTRDDGGTEAEIAAAFPGALATDGSAYAVGLICLNRGVPCLVIQSLTGTTPGPRSPGHDSACRL AVRVAEMLCRGW
Sequences:
>Translated_572_residues MVSRHPPVFFTSDLHGYGIGNTSWFDDNSPRALAGRCLIDALEYLRTSSKFAARDWHVVNANAARIVHHCLADPALARHD MLGHVAPAIEEICGRIVASRQYRIPFYGEDFWDWASVVDAFCEVQNLSPTAERVARRELDQFRRTVHIRMPGGLSVGDPD QEWFGPAIATRAHHLLDTRMSGFDPDLRHELQAQALERIERGRYRGRPVLPWQVNWHHGQVVAEFQRAASEQAAELADFA WLAVPVEPGKRALVLARILQGAGAVKDRRTVLQTLEELYRCETPGRPLGQGVIGASIEASLDVLEALWLQLEDRDKSSLN AMLEALRFLHAKAHTIGFVVETAEDIERLIQAMGPGTLIEQRNAARAIIRHASFHAVICLGRSMTEVASATSVAIEEHGA RWVIMPGRAHPLGPVLSQAGEGARFVGAGPGDLVIVSALASFRIEMKLRDALSIAEPPFPDDGGMIIPADPALCRLAHDS AAKMLNAGGVFFEGVTVTRDDGGTEAEIAAAFPGALATDGSAYAVGLICLNRGVPCLVIQSLTGTTPGPRSPGHDSACRL AVRVAEMLCRGW >Mature_572_residues MVSRHPPVFFTSDLHGYGIGNTSWFDDNSPRALAGRCLIDALEYLRTSSKFAARDWHVVNANAARIVHHCLADPALARHD MLGHVAPAIEEICGRIVASRQYRIPFYGEDFWDWASVVDAFCEVQNLSPTAERVARRELDQFRRTVHIRMPGGLSVGDPD QEWFGPAIATRAHHLLDTRMSGFDPDLRHELQAQALERIERGRYRGRPVLPWQVNWHHGQVVAEFQRAASEQAAELADFA WLAVPVEPGKRALVLARILQGAGAVKDRRTVLQTLEELYRCETPGRPLGQGVIGASIEASLDVLEALWLQLEDRDKSSLN AMLEALRFLHAKAHTIGFVVETAEDIERLIQAMGPGTLIEQRNAARAIIRHASFHAVICLGRSMTEVASATSVAIEEHGA RWVIMPGRAHPLGPVLSQAGEGARFVGAGPGDLVIVSALASFRIEMKLRDALSIAEPPFPDDGGMIIPADPALCRLAHDS AAKMLNAGGVFFEGVTVTRDDGGTEAEIAAAFPGALATDGSAYAVGLICLNRGVPCLVIQSLTGTTPGPRSPGHDSACRL AVRVAEMLCRGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62240; Mature: 62240
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRHPPVFFTSDLHGYGIGNTSWFDDNSPRALAGRCLIDALEYLRTSSKFAARDWHVVN CCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEEC ANAARIVHHCLADPALARHDMLGHVAPAIEEICGRIVASRQYRIPFYGEDFWDWASVVDA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHH FCEVQNLSPTAERVARRELDQFRRTVHIRMPGGLSVGDPDQEWFGPAIATRAHHLLDTRM HHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHCHHHHHHHHHHHHHHH SGFDPDLRHELQAQALERIERGRYRGRPVLPWQVNWHHGQVVAEFQRAASEQAAELADFA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHE WLAVPVEPGKRALVLARILQGAGAVKDRRTVLQTLEELYRCETPGRPLGQGVIGASIEAS EEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH LDVLEALWLQLEDRDKSSLNAMLEALRFLHAKAHTIGFVVETAEDIERLIQAMGPGTLIE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHCCCCCHHH QRNAARAIIRHASFHAVICLGRSMTEVASATSVAIEEHGARWVIMPGRAHPLGPVLSQAG HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCC EGARFVGAGPGDLVIVSALASFRIEMKLRDALSIAEPPFPDDGGMIIPADPALCRLAHDS CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHH AAKMLNAGGVFFEGVTVTRDDGGTEAEIAAAFPGALATDGSAYAVGLICLNRGVPCLVIQ HHHHHHCCCEEEECEEEEECCCCCCCEEEEECCCCCCCCCCHHEEEEEHHCCCCCEEEEE SLTGTTPGPRSPGHDSACRLAVRVAEMLCRGW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVSRHPPVFFTSDLHGYGIGNTSWFDDNSPRALAGRCLIDALEYLRTSSKFAARDWHVVN CCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEEC ANAARIVHHCLADPALARHDMLGHVAPAIEEICGRIVASRQYRIPFYGEDFWDWASVVDA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHH FCEVQNLSPTAERVARRELDQFRRTVHIRMPGGLSVGDPDQEWFGPAIATRAHHLLDTRM HHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHCHHHHHHHHHHHHHHH SGFDPDLRHELQAQALERIERGRYRGRPVLPWQVNWHHGQVVAEFQRAASEQAAELADFA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHE WLAVPVEPGKRALVLARILQGAGAVKDRRTVLQTLEELYRCETPGRPLGQGVIGASIEAS EEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH LDVLEALWLQLEDRDKSSLNAMLEALRFLHAKAHTIGFVVETAEDIERLIQAMGPGTLIE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHCCCCCHHH QRNAARAIIRHASFHAVICLGRSMTEVASATSVAIEEHGARWVIMPGRAHPLGPVLSQAG HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCC EGARFVGAGPGDLVIVSALASFRIEMKLRDALSIAEPPFPDDGGMIIPADPALCRLAHDS CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHH AAKMLNAGGVFFEGVTVTRDDGGTEAEIAAAFPGALATDGSAYAVGLICLNRGVPCLVIQ HHHHHHCCCEEEECEEEEECCCCCCCEEEEECCCCCCCCCCHHEEEEEHHCCCCCEEEEE SLTGTTPGPRSPGHDSACRLAVRVAEMLCRGW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA