| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is purK [H]
Identifier: 146338301
GI number: 146338301
Start: 1280830
End: 1281939
Strand: Reverse
Name: purK [H]
Synonym: BRADO1205
Alternate gene names: 146338301
Gene position: 1281939-1280830 (Counterclockwise)
Preceding gene: 146338302
Following gene: 146338300
Centisome position: 17.19
GC content: 66.31
Gene sequence:
>1110_bases GTGACCGGCTCCAATCGGGTGAAGCTCAAGCCCGGGGACACCATCGGCATTCTCGGCGGCGGCCAGCTCGGCCGCATGCT GGCGTTGGCGGCCGCGCGGCTCGGACTGCGTTGCCAGGTGTTCTCGCCCGACCCTGACTCGCCGGCCTTTGACGTGGTCC TGAACGCCACCTGCGCCGAATATGCGGACGTCGAGGCGCTGGAATTGTTCGCGAACGACGTCGACGTCGTCACCTACGAG TTCGAAAACGTCCCGTCGGCGGCGGCGCTGGTCCTGGCCGCACGACGTCCCGTGCTGCCCAGCCGCTCCGCGCTGGAGAC CACCCAGGACCGACTGACGGAAAAGGATTTCGTCACCTCGCTGGGCATCCACACCGCCAATTACGCCGACGTCTCGTCGG TCGGCACATTGCGAGAGGCCATCCTGCGCATCGGCCTGCCGGCCGTGCTGAAAACCCGCCGCTTCGGCTACGACGGCAAG GGTCAGGTCAAGATCCGCCAGGGCGACGACCTCGAACGGATCTGGGCCGAGCTCGGCACCAAATCCGCCATCCTCGAGGC CTTCGTGCCCTTCGAGCGCGAGATCTCCGTAGTGGCTGCGCGTGCCGCCGATGGCCAGGTCGAATGCTTCGACGTCACCG AGAACGAGCATCGCGATCACATTCTCAAGGTGTCGCGGGCACCCGCTTCCATTCCGGACGCGCTCGCTGACGAGGCCCGG GACATCGCCAGCCGGATCGCGACGGCACTGGACTATGTGGGGGTCCTCGCGGTGGAGATGTTCGTCGTGACCGCTGGGCC TAAACCCGGCGTGGTTGTCAACGAGATTGCGCCACGGGTGCACAATTCCGGCCATTGGACGCTCGACGGCGCGTCCATCT CGCAGTTCGAACAGCACATCCGGGCGATCGCTGGCTGGCCTCTCGGCAAACCAGTGCGCCATGGCCATGTCACGATGACC AATCTGATCGGCGATGAGATCGACAGCTATGAGCAGTGGCTGACCGTTCCCGGAGCGACCGTTCACCTCTATGGCAAGGG CGCCCCCCGCCCGGGCCGCAAGATGGGCCATGTGACGCAGGTCTCGCCGCTCCCGCCCCGGATGGGCTGA
Upstream 100 bases:
>100_bases CAAGCGTCCTGGCGCTGTCGGACCCGGCGCTGGCCGAGCGTCTCTCCGCCTGGCGGCAGTCGCAGACCAACGCCATCGCC GAACGTCCGGAGGGCGCGGC
Downstream 100 bases:
>100_bases AATATACCAGATCTGAAGTGCTAACTTTGGCGTTAAGAGCCTATCAGCGGGTGGACAGCGTTGCGCATGTCTGATACACG GGCGCCCTCAAGGTTAAGGG
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTGSNRVKLKPGDTIGILGGGQLGRMLALAAARLGLRCQVFSPDPDSPAFDVVLNATCAEYADVEALELFANDVDVVTYE FENVPSAAALVLAARRPVLPSRSALETTQDRLTEKDFVTSLGIHTANYADVSSVGTLREAILRIGLPAVLKTRRFGYDGK GQVKIRQGDDLERIWAELGTKSAILEAFVPFEREISVVAARAADGQVECFDVTENEHRDHILKVSRAPASIPDALADEAR DIASRIATALDYVGVLAVEMFVVTAGPKPGVVVNEIAPRVHNSGHWTLDGASISQFEQHIRAIAGWPLGKPVRHGHVTMT NLIGDEIDSYEQWLTVPGATVHLYGKGAPRPGRKMGHVTQVSPLPPRMG
Sequences:
>Translated_369_residues MTGSNRVKLKPGDTIGILGGGQLGRMLALAAARLGLRCQVFSPDPDSPAFDVVLNATCAEYADVEALELFANDVDVVTYE FENVPSAAALVLAARRPVLPSRSALETTQDRLTEKDFVTSLGIHTANYADVSSVGTLREAILRIGLPAVLKTRRFGYDGK GQVKIRQGDDLERIWAELGTKSAILEAFVPFEREISVVAARAADGQVECFDVTENEHRDHILKVSRAPASIPDALADEAR DIASRIATALDYVGVLAVEMFVVTAGPKPGVVVNEIAPRVHNSGHWTLDGASISQFEQHIRAIAGWPLGKPVRHGHVTMT NLIGDEIDSYEQWLTVPGATVHLYGKGAPRPGRKMGHVTQVSPLPPRMG >Mature_368_residues TGSNRVKLKPGDTIGILGGGQLGRMLALAAARLGLRCQVFSPDPDSPAFDVVLNATCAEYADVEALELFANDVDVVTYEF ENVPSAAALVLAARRPVLPSRSALETTQDRLTEKDFVTSLGIHTANYADVSSVGTLREAILRIGLPAVLKTRRFGYDGKG QVKIRQGDDLERIWAELGTKSAILEAFVPFEREISVVAARAADGQVECFDVTENEHRDHILKVSRAPASIPDALADEARD IASRIATALDYVGVLAVEMFVVTAGPKPGVVVNEIAPRVHNSGHWTLDGASISQFEQHIRAIAGWPLGKPVRHGHVTMTN LIGDEIDSYEQWLTVPGATVHLYGKGAPRPGRKMGHVTQVSPLPPRMG
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=345, Percent_Identity=37.1014492753623, Blast_Score=189, Evalue=4e-49, Organism=Escherichia coli, GI1788155, Length=365, Percent_Identity=26.8493150684932, Blast_Score=102, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6324702, Length=370, Percent_Identity=32.4324324324324, Blast_Score=197, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 39736; Mature: 39605
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSNRVKLKPGDTIGILGGGQLGRMLALAAARLGLRCQVFSPDPDSPAFDVVLNATCAE CCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECHHHH YADVEALELFANDVDVVTYEFENVPSAAALVLAARRPVLPSRSALETTQDRLTEKDFVTS HCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LGIHTANYADVSSVGTLREAILRIGLPAVLKTRRFGYDGKGQVKIRQGDDLERIWAELGT HCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCC KSAILEAFVPFEREISVVAARAADGQVECFDVTENEHRDHILKVSRAPASIPDALADEAR HHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHEEEECCCCCCCCHHHHHHHH DIASRIATALDYVGVLAVEMFVVTAGPKPGVVVNEIAPRVHNSGHWTLDGASISQFEQHI HHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEHHHHHHHHCCCCCEEECCCCHHHHHHHH RAIAGWPLGKPVRHGHVTMTNLIGDEIDSYEQWLTVPGATVHLYGKGAPRPGRKMGHVTQ HHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCEEE VSPLPPRMG CCCCCCCCC >Mature Secondary Structure TGSNRVKLKPGDTIGILGGGQLGRMLALAAARLGLRCQVFSPDPDSPAFDVVLNATCAE CCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECHHHH YADVEALELFANDVDVVTYEFENVPSAAALVLAARRPVLPSRSALETTQDRLTEKDFVTS HCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LGIHTANYADVSSVGTLREAILRIGLPAVLKTRRFGYDGKGQVKIRQGDDLERIWAELGT HCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCC KSAILEAFVPFEREISVVAARAADGQVECFDVTENEHRDHILKVSRAPASIPDALADEAR HHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHEEEECCCCCCCCHHHHHHHH DIASRIATALDYVGVLAVEMFVVTAGPKPGVVVNEIAPRVHNSGHWTLDGASISQFEQHI HHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEHHHHHHHHCCCCCEEECCCCHHHHHHHH RAIAGWPLGKPVRHGHVTMTNLIGDEIDSYEQWLTVPGATVHLYGKGAPRPGRKMGHVTQ HHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCEEE VSPLPPRMG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]