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The map label for this gene is ycbK [H]

Identifier: 146338285

GI number: 146338285

Start: 1263223

End: 1264773

Strand: Reverse

Name: ycbK [H]

Synonym: BRADO1189

Alternate gene names: 146338285

Gene position: 1264773-1263223 (Counterclockwise)

Preceding gene: 146338286

Following gene: 146338282

Centisome position: 16.96

GC content: 66.99

Gene sequence:

>1551_bases
ATGGGAGCCGGGACGGTCCGTGACGCCGAAGCCCTGAATGACACGCGCACGCTGACCTTCCACCATACCCATTCCGGCGA
AGACCTCACCGTCACCTTCAAGCGCGAGGGCCGTTACGATGAAGACGCGCTGAAGAAGCTGAACCACTTCCTGCGCGACT
GGCGCACCCAGGACGAGACGGTCATGGACCGTCGCCTGTTCGACATCCTCTGGGAAGTCTATCGCGACGTCGACGGCAAG
CAGCCGATCCAGATCATCTCGTCGTACCGCTCCCCCGCCACCAATTCGATGCTGCGTCGGCGCTCGGCGCATTCCGGGGT
GGCCCGCCACAGCCAGCACATGCTCGGCCATGCGATGGATTTCTACATCCCCGGCGTGCCGCTGGAGCAGATCCGCTACG
CCGGCCTGCGCCTGCAGCGCGGCGGCGTCGGCTTCTATCCCACTTCCGGGTCGCCCTTCGTGCATCTCGACACCGGCAAT
ATCCGGCATTGGCCGCGCATGACCGCCGACCAGCTCGCCCGCGTGTTCCCGGACGGCAAGACGGTCCACGTCCCGAGCAA
TGGCGTGCCACTGAAGGGCTATGAGCTGGCCAGGGCCGAAATCGAGAAGCGCGGCTCCGGCGAGGATGCATCATCCGGCG
GCTCGAACCTGTTTGCGCGGCTGTTCCGCGGCCGTCCCAGCGAGGACGACGACGAGGCGGGCGAGAGCGAGGTCAAGGCC
GACGCGAAACCGATCCAGACTGCGGCGCTCGTCGCCAAGACGACCGACAAGCCCGCGGACAAGCCTTTCGAGAAAGAGCG
CTCCGCGGACAATAAGCCGGCGACGGCTCGCGGCAAGATCGCCAACGCGCTGCAGCTGGCCTCGGCGGACTCGCAGGCGG
TGCAGCAGCCCTCGGCGAAAACCGACAGCAAGCCGGACGCGAAGCCCGAGACCACCAGCGCGATCGATGCGGCCGCAAGC
GGTGGCGCGCCGCAGAGCGTCGCGGACATCATCAATTCGCGCGGCTTCTGGGGTGACAATCCCGCGACGCCGAAGCAGGC
CACGCCCGAGCAGGTTGCGGCGATCACTGCGCGCCGGGCGCTATCGGCCATTGACCAGCCGCAGAATGCCAGCCTGATGC
AGGCGATGGCCTTTGCTCCTGCACCCGTGGCCGATCGCGGCAATACCGCCACCTCGGCGATCCCCGTGCGCAACTCGCGT
CAGTCGGCATCCCGCCCGGCATCGGCGCCAGCGGAGGCCACCAAGGGCAATCAGAGCCAGGACGGCCTGATCACGATGGC
GACACGGATGTCGGCCGCCAAGGGGCCTGATTCGACCTGGATGCGGGCGATCATGCTGACACCGAGCGCATCATCGTCGA
TGTCGGTCACCAAACTGGGCGACCCGGATCTGACGGTCATGCGCAGCTACTTCGTGAAGCCGCAGACCACCCTGACGATG
ACCTTCGCGGCCGATCCGACGCCGGGGCTGAGCTACGACCAGTTCAGCGGCCCCGCGATCATCAAGCTCGAGACCAGATC
CTTCACGATGCGCGCCGCGGCCCTGCGCTGA

Upstream 100 bases:

>100_bases
TTCGTTGCCCAGAAAGGCCTCGTTGCCCAAAAAGGCCTCGTTGCCCAAAAAGGCTTGGAACGCCGTCTGCCGCACCGGCC
TTGCATCACTGCTCCTCGTG

Downstream 100 bases:

>100_bases
CGACGCCGAAACCGCCCCCTGAAATGTCAATGCCCCGCGATCGGCTCGCGGGGACATTGGGTGACGCGCCGCAGGCGCGC
CTCGTTCAGATCATGCCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MGAGTVRDAEALNDTRTLTFHHTHSGEDLTVTFKREGRYDEDALKKLNHFLRDWRTQDETVMDRRLFDILWEVYRDVDGK
QPIQIISSYRSPATNSMLRRRSAHSGVARHSQHMLGHAMDFYIPGVPLEQIRYAGLRLQRGGVGFYPTSGSPFVHLDTGN
IRHWPRMTADQLARVFPDGKTVHVPSNGVPLKGYELARAEIEKRGSGEDASSGGSNLFARLFRGRPSEDDDEAGESEVKA
DAKPIQTAALVAKTTDKPADKPFEKERSADNKPATARGKIANALQLASADSQAVQQPSAKTDSKPDAKPETTSAIDAAAS
GGAPQSVADIINSRGFWGDNPATPKQATPEQVAAITARRALSAIDQPQNASLMQAMAFAPAPVADRGNTATSAIPVRNSR
QSASRPASAPAEATKGNQSQDGLITMATRMSAAKGPDSTWMRAIMLTPSASSSMSVTKLGDPDLTVMRSYFVKPQTTLTM
TFAADPTPGLSYDQFSGPAIIKLETRSFTMRAAALR

Sequences:

>Translated_516_residues
MGAGTVRDAEALNDTRTLTFHHTHSGEDLTVTFKREGRYDEDALKKLNHFLRDWRTQDETVMDRRLFDILWEVYRDVDGK
QPIQIISSYRSPATNSMLRRRSAHSGVARHSQHMLGHAMDFYIPGVPLEQIRYAGLRLQRGGVGFYPTSGSPFVHLDTGN
IRHWPRMTADQLARVFPDGKTVHVPSNGVPLKGYELARAEIEKRGSGEDASSGGSNLFARLFRGRPSEDDDEAGESEVKA
DAKPIQTAALVAKTTDKPADKPFEKERSADNKPATARGKIANALQLASADSQAVQQPSAKTDSKPDAKPETTSAIDAAAS
GGAPQSVADIINSRGFWGDNPATPKQATPEQVAAITARRALSAIDQPQNASLMQAMAFAPAPVADRGNTATSAIPVRNSR
QSASRPASAPAEATKGNQSQDGLITMATRMSAAKGPDSTWMRAIMLTPSASSSMSVTKLGDPDLTVMRSYFVKPQTTLTM
TFAADPTPGLSYDQFSGPAIIKLETRSFTMRAAALR
>Mature_515_residues
GAGTVRDAEALNDTRTLTFHHTHSGEDLTVTFKREGRYDEDALKKLNHFLRDWRTQDETVMDRRLFDILWEVYRDVDGKQ
PIQIISSYRSPATNSMLRRRSAHSGVARHSQHMLGHAMDFYIPGVPLEQIRYAGLRLQRGGVGFYPTSGSPFVHLDTGNI
RHWPRMTADQLARVFPDGKTVHVPSNGVPLKGYELARAEIEKRGSGEDASSGGSNLFARLFRGRPSEDDDEAGESEVKAD
AKPIQTAALVAKTTDKPADKPFEKERSADNKPATARGKIANALQLASADSQAVQQPSAKTDSKPDAKPETTSAIDAAASG
GAPQSVADIINSRGFWGDNPATPKQATPEQVAAITARRALSAIDQPQNASLMQAMAFAPAPVADRGNTATSAIPVRNSRQ
SASRPASAPAEATKGNQSQDGLITMATRMSAAKGPDSTWMRAIMLTPSASSSMSVTKLGDPDLTVMRSYFVKPQTTLTMT
FAADPTPGLSYDQFSGPAIIKLETRSFTMRAAALR

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=149, Percent_Identity=45.6375838926174, Blast_Score=128, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 55793; Mature: 55662

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGTVRDAEALNDTRTLTFHHTHSGEDLTVTFKREGRYDEDALKKLNHFLRDWRTQDET
CCCCCCCHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHH
VMDRRLFDILWEVYRDVDGKQPIQIISSYRSPATNSMLRRRSAHSGVARHSQHMLGHAMD
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYIPGVPLEQIRYAGLRLQRGGVGFYPTSGSPFVHLDTGNIRHWPRMTADQLARVFPDGK
HHCCCCCHHHHHHCCEEEECCCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCC
TVHVPSNGVPLKGYELARAEIEKRGSGEDASSGGSNLFARLFRGRPSEDDDEAGESEVKA
EEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHC
DAKPIQTAALVAKTTDKPADKPFEKERSADNKPATARGKIANALQLASADSQAVQQPSAK
CCCHHHHHHHEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCC
TDSKPDAKPETTSAIDAAASGGAPQSVADIINSRGFWGDNPATPKQATPEQVAAITARRA
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LSAIDQPQNASLMQAMAFAPAPVADRGNTATSAIPVRNSRQSASRPASAPAEATKGNQSQ
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHCCCCCCCCCHHCCCCCCC
DGLITMATRMSAAKGPDSTWMRAIMLTPSASSSMSVTKLGDPDLTVMRSYFVKPQTTLTM
CCEEEEEHHHHHCCCCCHHHEEEEEECCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEE
TFAADPTPGLSYDQFSGPAIIKLETRSFTMRAAALR
EEECCCCCCCCCCCCCCCEEEEEECCCEEEHHHHCC
>Mature Secondary Structure 
GAGTVRDAEALNDTRTLTFHHTHSGEDLTVTFKREGRYDEDALKKLNHFLRDWRTQDET
CCCCCCHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHH
VMDRRLFDILWEVYRDVDGKQPIQIISSYRSPATNSMLRRRSAHSGVARHSQHMLGHAMD
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYIPGVPLEQIRYAGLRLQRGGVGFYPTSGSPFVHLDTGNIRHWPRMTADQLARVFPDGK
HHCCCCCHHHHHHCCEEEECCCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCC
TVHVPSNGVPLKGYELARAEIEKRGSGEDASSGGSNLFARLFRGRPSEDDDEAGESEVKA
EEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHC
DAKPIQTAALVAKTTDKPADKPFEKERSADNKPATARGKIANALQLASADSQAVQQPSAK
CCCHHHHHHHEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCC
TDSKPDAKPETTSAIDAAASGGAPQSVADIINSRGFWGDNPATPKQATPEQVAAITARRA
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LSAIDQPQNASLMQAMAFAPAPVADRGNTATSAIPVRNSRQSASRPASAPAEATKGNQSQ
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHCCCCCCCCCHHCCCCCCC
DGLITMATRMSAAKGPDSTWMRAIMLTPSASSSMSVTKLGDPDLTVMRSYFVKPQTTLTM
CCEEEEEHHHHHCCCCCHHHEEEEEECCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEE
TFAADPTPGLSYDQFSGPAIIKLETRSFTMRAAALR
EEECCCCCCCCCCCCCCCEEEEEECCCEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]