| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is pyk [H]
Identifier: 146338281
GI number: 146338281
Start: 1260092
End: 1261528
Strand: Reverse
Name: pyk [H]
Synonym: BRADO1185
Alternate gene names: 146338281
Gene position: 1261528-1260092 (Counterclockwise)
Preceding gene: 146338282
Following gene: 146338273
Centisome position: 16.92
GC content: 68.75
Gene sequence:
>1437_bases ATGAGACGCCTGCGCCGCATCAAGATTCTCGCCACGCTCGGTCCCGCCTCCTCGGACAGCGCGATGATTCGCAAGCTGTT CGAGGCCGGGGCCGACATCTTCCGCATCAACATGAGCCACACCCCGCATGACAAGCTGCGGGAGCTGGTGGCCACGATCC GCAGCGTCGAAGCCAGCTATGGCCGGCCGATCGGCATCCTGGTCGATCTGCAGGGCCCCAAACTGCGGCTTGGCACGTTT GCCGAAGGTCCGGTCCAGCTCAACAACGGACAGAGCTTCGTGCTCGATTCCGACAAGACGCCCGGCGATGCGACACGGGT GTACCTGCCGCATCCGGAGATCCTGGCAGCCCTGCAGCCCGGCCACGCGCTGCTGCTCGACGACGGCAAGGTGCGGCTGA TCGCCGAGGAGACGACCCCGACGCGCGCCGTCACCCGCGTCGTCATCGGCGGCAAGATGTCCGACCGCAAGGGCGTGAGC CTGCCCGACACCGATCTGCCGGTCTCGGCGATGACGCCGAAGGACCGCGCCGATCTCGAAGCGGCGCTGAACATCGGCAT CGACTGGATCGCGCTGTCCTTCGTGCAGCGCGCCGATGACGTGCTCGAGGCGAAGAAGATCATCCGCGGCCGCGCCGCCG TGATGTCCAAGATCGAGAAACCGCAGGCGATCGAGCGTCTCAACGACATCGTCGATGTCTCCGACGCGCTGATGGTGGCG CGCGGCGATCTCGGCGTCGAGCTGCCGCTGGAGCGCGTGCCGGGCCTGCAGAAGCAGATGACACGGTTGGCGCGCCGCGC CGGCAAGCCGGTGGTGGTGGCGACGCAGATGCTGGAATCGATGATCCAGTCGCCGGTCCCGACCCGCGCGGAGGTCTCCG ACGTGGCGACCGCGGTCTATGAGGGCGCTGACGCGATCATGCTGTCGGCGGAATCGGCGGCCGGCAAGTTTCCGGTCGAG GCGGTCTCGACGATGAACCGGATCGGCGAGGAGGTCGAACGCGACATCGTCTATCGCTCGGTGATCGCGGCGCAGCGGCC CGAGCCGGAGTCGACCGCGGGCGACGCCATCGCCGAGGCGGCGCGCAGGATTGCCGAAAATCTCGATCTGCCGGCGATCA TCTGCTGGACGTCGTCCGGCTCGACCGCGGTCCGCGTCGCGCGCGAGCGGCCCAAGCCGCCGGTGGTCGCGATCACCCCG AACCTGGCGACCGGGCGCCGCCTCGCGGTGGTGTGGGGCGTCCATTGCGTGGTGGCCGAGGATGCCCGCGACCAGGACGA CATGGTCGAACGTGCCGGCTCGATCGCGTTTCGCGACGGCTTCGTCCGCGCCGGCCAGCGCGTCATCGTCGTTGCCGGCG TCCCGCTCGGCACCCCCGGCACCACCAACATGGTGCGCATCGCCTATGTCGGGCCGTCGAACGAGGCCCATCTCTGA
Upstream 100 bases:
>100_bases GTCCGCTCGGCCCCGGCAATGTCCCTGGCCTGCCCAATGGTCCTCAGGCGGCGCCGCCTGCCGGATCCGGCCTGCCGTCC GGGCCGGCAGCGCCCAAACC
Downstream 100 bases:
>100_bases GCTGATCAGTCGGCGCTGCCGACCGGCTTGAGACCCGCGGTCGAAGCCGCGGGCAGCGCGGCCGAGATCACCGGACAGAC CATGATGTCGGTGCCATCGG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MRRLRRIKILATLGPASSDSAMIRKLFEAGADIFRINMSHTPHDKLRELVATIRSVEASYGRPIGILVDLQGPKLRLGTF AEGPVQLNNGQSFVLDSDKTPGDATRVYLPHPEILAALQPGHALLLDDGKVRLIAEETTPTRAVTRVVIGGKMSDRKGVS LPDTDLPVSAMTPKDRADLEAALNIGIDWIALSFVQRADDVLEAKKIIRGRAAVMSKIEKPQAIERLNDIVDVSDALMVA RGDLGVELPLERVPGLQKQMTRLARRAGKPVVVATQMLESMIQSPVPTRAEVSDVATAVYEGADAIMLSAESAAGKFPVE AVSTMNRIGEEVERDIVYRSVIAAQRPEPESTAGDAIAEAARRIAENLDLPAIICWTSSGSTAVRVARERPKPPVVAITP NLATGRRLAVVWGVHCVVAEDARDQDDMVERAGSIAFRDGFVRAGQRVIVVAGVPLGTPGTTNMVRIAYVGPSNEAHL
Sequences:
>Translated_478_residues MRRLRRIKILATLGPASSDSAMIRKLFEAGADIFRINMSHTPHDKLRELVATIRSVEASYGRPIGILVDLQGPKLRLGTF AEGPVQLNNGQSFVLDSDKTPGDATRVYLPHPEILAALQPGHALLLDDGKVRLIAEETTPTRAVTRVVIGGKMSDRKGVS LPDTDLPVSAMTPKDRADLEAALNIGIDWIALSFVQRADDVLEAKKIIRGRAAVMSKIEKPQAIERLNDIVDVSDALMVA RGDLGVELPLERVPGLQKQMTRLARRAGKPVVVATQMLESMIQSPVPTRAEVSDVATAVYEGADAIMLSAESAAGKFPVE AVSTMNRIGEEVERDIVYRSVIAAQRPEPESTAGDAIAEAARRIAENLDLPAIICWTSSGSTAVRVARERPKPPVVAITP NLATGRRLAVVWGVHCVVAEDARDQDDMVERAGSIAFRDGFVRAGQRVIVVAGVPLGTPGTTNMVRIAYVGPSNEAHL >Mature_478_residues MRRLRRIKILATLGPASSDSAMIRKLFEAGADIFRINMSHTPHDKLRELVATIRSVEASYGRPIGILVDLQGPKLRLGTF AEGPVQLNNGQSFVLDSDKTPGDATRVYLPHPEILAALQPGHALLLDDGKVRLIAEETTPTRAVTRVVIGGKMSDRKGVS LPDTDLPVSAMTPKDRADLEAALNIGIDWIALSFVQRADDVLEAKKIIRGRAAVMSKIEKPQAIERLNDIVDVSDALMVA RGDLGVELPLERVPGLQKQMTRLARRAGKPVVVATQMLESMIQSPVPTRAEVSDVATAVYEGADAIMLSAESAAGKFPVE AVSTMNRIGEEVERDIVYRSVIAAQRPEPESTAGDAIAEAARRIAENLDLPAIICWTSSGSTAVRVARERPKPPVVAITP NLATGRRLAVVWGVHCVVAEDARDQDDMVERAGSIAFRDGFVRAGQRVIVVAGVPLGTPGTTNMVRIAYVGPSNEAHL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI32967597, Length=491, Percent_Identity=36.6598778004073, Blast_Score=278, Evalue=9e-75, Organism=Homo sapiens, GI10835121, Length=491, Percent_Identity=36.6598778004073, Blast_Score=278, Evalue=9e-75, Organism=Homo sapiens, GI33286422, Length=486, Percent_Identity=34.7736625514403, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI33286420, Length=486, Percent_Identity=34.7736625514403, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI33286418, Length=491, Percent_Identity=35.234215885947, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=31.3588850174216, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=31.3588850174216, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=27.0042194092827, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=27.0042194092827, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=26.1682242990654, Blast_Score=94, Evalue=3e-19, Organism=Escherichia coli, GI1788160, Length=483, Percent_Identity=39.5445134575569, Blast_Score=298, Evalue=6e-82, Organism=Escherichia coli, GI1787965, Length=466, Percent_Identity=33.9055793991416, Blast_Score=279, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17544584, Length=484, Percent_Identity=34.504132231405, Blast_Score=275, Evalue=5e-74, Organism=Caenorhabditis elegans, GI17506829, Length=483, Percent_Identity=35.1966873706004, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI71984413, Length=483, Percent_Identity=35.1966873706004, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI71984406, Length=483, Percent_Identity=35.1966873706004, Blast_Score=259, Evalue=3e-69, Organism=Caenorhabditis elegans, GI17506831, Length=483, Percent_Identity=35.1966873706004, Blast_Score=258, Evalue=4e-69, Organism=Saccharomyces cerevisiae, GI6319279, Length=485, Percent_Identity=32.5773195876289, Blast_Score=240, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6324923, Length=492, Percent_Identity=32.1138211382114, Blast_Score=234, Evalue=2e-62, Organism=Drosophila melanogaster, GI24648964, Length=490, Percent_Identity=34.6938775510204, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI28571814, Length=490, Percent_Identity=34.6938775510204, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI24648966, Length=425, Percent_Identity=33.4117647058824, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI24581235, Length=485, Percent_Identity=30.3092783505155, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24646914, Length=240, Percent_Identity=36.25, Blast_Score=144, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51452; Mature: 51452
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLRRIKILATLGPASSDSAMIRKLFEAGADIFRINMSHTPHDKLRELVATIRSVEASY CCCHHEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHC GRPIGILVDLQGPKLRLGTFAEGPVQLNNGQSFVLDSDKTPGDATRVYLPHPEILAALQP CCCEEEEEECCCCCEEECCCCCCCEEECCCCEEEEECCCCCCCCEEEEECCHHHHHEECC GHALLLDDGKVRLIAEETTPTRAVTRVVIGGKMSDRKGVSLPDTDLPVSAMTPKDRADLE CCEEEEECCCEEEEEECCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AALNIGIDWIALSFVQRADDVLEAKKIIRGRAAVMSKIEKPQAIERLNDIVDVSDALMVA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEE RGDLGVELPLERVPGLQKQMTRLARRAGKPVVVATQMLESMIQSPVPTRAEVSDVATAVY ECCCCCCCCHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHH EGADAIMLSAESAAGKFPVEAVSTMNRIGEEVERDIVYRSVIAAQRPEPESTAGDAIAEA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ARRIAENLDLPAIICWTSSGSTAVRVARERPKPPVVAITPNLATGRRLAVVWGVHCVVAE HHHHHHCCCCCEEEEEECCCCCEEEEEHHCCCCCEEEECCCCCCCCEEEEEEEEEEEEEC DARDQDDMVERAGSIAFRDGFVRAGQRVIVVAGVPLGTPGTTNMVRIAYVGPSNEAHL CCCCHHHHHHHHCCEEEECHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MRRLRRIKILATLGPASSDSAMIRKLFEAGADIFRINMSHTPHDKLRELVATIRSVEASY CCCHHEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHC GRPIGILVDLQGPKLRLGTFAEGPVQLNNGQSFVLDSDKTPGDATRVYLPHPEILAALQP CCCEEEEEECCCCCEEECCCCCCCEEECCCCEEEEECCCCCCCCEEEEECCHHHHHEECC GHALLLDDGKVRLIAEETTPTRAVTRVVIGGKMSDRKGVSLPDTDLPVSAMTPKDRADLE CCEEEEECCCEEEEEECCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AALNIGIDWIALSFVQRADDVLEAKKIIRGRAAVMSKIEKPQAIERLNDIVDVSDALMVA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEE RGDLGVELPLERVPGLQKQMTRLARRAGKPVVVATQMLESMIQSPVPTRAEVSDVATAVY ECCCCCCCCHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHH EGADAIMLSAESAAGKFPVEAVSTMNRIGEEVERDIVYRSVIAAQRPEPESTAGDAIAEA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ARRIAENLDLPAIICWTSSGSTAVRVARERPKPPVVAITPNLATGRRLAVVWGVHCVVAE HHHHHHCCCCCEEEEEECCCCCEEEEEHHCCCCCEEEECCCCCCCCEEEEEEEEEEEEEC DARDQDDMVERAGSIAFRDGFVRAGQRVIVVAGVPLGTPGTTNMVRIAYVGPSNEAHL CCCCHHHHHHHHCCEEEECHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA