Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yfeW [C]

Identifier: 146338230

GI number: 146338230

Start: 1206061

End: 1207335

Strand: Direct

Name: yfeW [C]

Synonym: BRADO1130

Alternate gene names: 146338230

Gene position: 1206061-1207335 (Clockwise)

Preceding gene: 146338228

Following gene: 146338231

Centisome position: 16.17

GC content: 67.14

Gene sequence:

>1275_bases
GTGCTCTTGAACAAGCTGATCTTCGCGGCCGCAGCCGCAGCCTTCACCGCGCTCGCCACACCGCTCGCCGCCGCGCCGCT
GGCGGAGGCCAGGCCCGAGGAGGTCGGCTTCTCGACATCCGGCCTGGCTCGCATGGACGATTTCTTCGCCCGCGAGATCG
CCGCGAAGCGCGTGCCTGGTGCGGTGGTGGCGATCGCGCGCGACGGCAAGCTGGTGCACTACAAGGCCTACGGCCAGCTC
GATCCGGTCAAGGGCACGCCGATGCCGCTCGATGCGATCTTCGCGCTGGCCTCGATGACCAAGCCGATGGCCGCGGTGGC
GGGGCTCACCTTGATGGAGCAGGGACGGCTGCCGCTGCAGGCGAAGCTCGCGGACTACTATCCGGCCTTCGCCGACATGA
AGGTCGGCGTGGTCCAGGCCGATGGCGCGCTCAAGCTCGAGCCGCAGGCCCGGCCGATCCTGATCCACGATCTCTATCGC
CACACCTCCGGTCTGATGTATGGCGGCCGGCCGGACAGCGCGAGCCCGGTGGCGCGGCTCTATCCCGACGGCATCGCACC
GGCGATCGAGGGCGACACCCAGGCCTTCATCGAGCGCATCACCAAGCTGCCGCTGGCGCATCAGCCGGGCACGCAGTTTG
AATATGGCTTCTCGATCGACGTGCTCGGCGCCGTCATCGAGAAGGTCAGCGAGCAGCGGCTCGGAGAATATCTCGCGGCC
AATGTATGGAAGCCGCTCGGCATGAACGATGCGACCTTCGCGCCGTCAGACGCGCAACGGCCGCGGCTGGCGCGGCCGTT
TCCGAACGATCCGCTCACCGGCAAGCCGCAGGCGATCAGGCTCCTGGATACAGTGACGAAGTCGGACTGCGGCGGTGCCT
GCTCCTTCGCCACCATCGGCGACTACATCCGCTTCGGCCAGATGCTGCTCAATGGCGGCGAACTCGACGGCGCGCGCGTC
CTGAGCCCGAAGACCGTGCATCACATGACCGCCAACCATCTCGGTCCGGAGATCAAGAACATGGTGGCCAATGTCGAGCC
GCATCGCGCCGGCTTCGGCTTCGGGCTTGGTGTCGCGGTGCGCACCAGCGAGGGCCTGTCGGCGGTGCCCGGCAATCCCG
GCGAGTTGAGCTGGAATGGCGCCTTCGGCACGCAGTTCTTCTGTGATCCGAAGGAGCGCCTGGTGGTGGTGGTCGGCACG
GCCGCGCCGGGCGAGCTGCGCAAATATTATCGCGAGCAGGTGCAGGACATCGTCTATGGCGCGATGGTAAAGTGA

Upstream 100 bases:

>100_bases
TGCGAGCGCTTGTCGTTCGCCGCCTGCTGCCCTACTGCTTGAGCAAGCGGACGTCACCGAATCCCATGACGACAAACGGG
ATCGTGTTCGCCTCAGGGAG

Downstream 100 bases:

>100_bases
CGCCATGCTCACCGTCCATCATCTCGGCAAATCCCAATCCGAACGCATCGTCTGGCTCTGCGAGGAGCTGGAGATTCCTT
ATGATCTGAAATGCTACGCG

Product: putative penicillin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MLLNKLIFAAAAAAFTALATPLAAAPLAEARPEEVGFSTSGLARMDDFFAREIAAKRVPGAVVAIARDGKLVHYKAYGQL
DPVKGTPMPLDAIFALASMTKPMAAVAGLTLMEQGRLPLQAKLADYYPAFADMKVGVVQADGALKLEPQARPILIHDLYR
HTSGLMYGGRPDSASPVARLYPDGIAPAIEGDTQAFIERITKLPLAHQPGTQFEYGFSIDVLGAVIEKVSEQRLGEYLAA
NVWKPLGMNDATFAPSDAQRPRLARPFPNDPLTGKPQAIRLLDTVTKSDCGGACSFATIGDYIRFGQMLLNGGELDGARV
LSPKTVHHMTANHLGPEIKNMVANVEPHRAGFGFGLGVAVRTSEGLSAVPGNPGELSWNGAFGTQFFCDPKERLVVVVGT
AAPGELRKYYREQVQDIVYGAMVK

Sequences:

>Translated_424_residues
MLLNKLIFAAAAAAFTALATPLAAAPLAEARPEEVGFSTSGLARMDDFFAREIAAKRVPGAVVAIARDGKLVHYKAYGQL
DPVKGTPMPLDAIFALASMTKPMAAVAGLTLMEQGRLPLQAKLADYYPAFADMKVGVVQADGALKLEPQARPILIHDLYR
HTSGLMYGGRPDSASPVARLYPDGIAPAIEGDTQAFIERITKLPLAHQPGTQFEYGFSIDVLGAVIEKVSEQRLGEYLAA
NVWKPLGMNDATFAPSDAQRPRLARPFPNDPLTGKPQAIRLLDTVTKSDCGGACSFATIGDYIRFGQMLLNGGELDGARV
LSPKTVHHMTANHLGPEIKNMVANVEPHRAGFGFGLGVAVRTSEGLSAVPGNPGELSWNGAFGTQFFCDPKERLVVVVGT
AAPGELRKYYREQVQDIVYGAMVK
>Mature_424_residues
MLLNKLIFAAAAAAFTALATPLAAAPLAEARPEEVGFSTSGLARMDDFFAREIAAKRVPGAVVAIARDGKLVHYKAYGQL
DPVKGTPMPLDAIFALASMTKPMAAVAGLTLMEQGRLPLQAKLADYYPAFADMKVGVVQADGALKLEPQARPILIHDLYR
HTSGLMYGGRPDSASPVARLYPDGIAPAIEGDTQAFIERITKLPLAHQPGTQFEYGFSIDVLGAVIEKVSEQRLGEYLAA
NVWKPLGMNDATFAPSDAQRPRLARPFPNDPLTGKPQAIRLLDTVTKSDCGGACSFATIGDYIRFGQMLLNGGELDGARV
LSPKTVHHMTANHLGPEIKNMVANVEPHRAGFGFGLGVAVRTSEGLSAVPGNPGELSWNGAFGTQFFCDPKERLVVVVGT
AAPGELRKYYREQVQDIVYGAMVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=432, Percent_Identity=25.462962962963, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 45316; Mature: 45316

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNKLIFAAAAAAFTALATPLAAAPLAEARPEEVGFSTSGLARMDDFFAREIAAKRVPG
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
AVVAIARDGKLVHYKAYGQLDPVKGTPMPLDAIFALASMTKPMAAVAGLTLMEQGRLPLQ
EEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AKLADYYPAFADMKVGVVQADGALKLEPQARPILIHDLYRHTSGLMYGGRPDSASPVARL
HHHHHHCCCHHCCEEEEEECCCCEEECCCCCCCHHHHHHHHHCCCEECCCCCCCCCHHHH
YPDGIAPAIEGDTQAFIERITKLPLAHQPGTQFEYGFSIDVLGAVIEKVSEQRLGEYLAA
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
NVWKPLGMNDATFAPSDAQRPRLARPFPNDPLTGKPQAIRLLDTVTKSDCGGACSFATIG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH
DYIRFGQMLLNGGELDGARVLSPKTVHHMTANHLGPEIKNMVANVEPHRAGFGFGLGVAV
HHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEE
RTSEGLSAVPGNPGELSWNGAFGTQFFCDPKERLVVVVGTAAPGELRKYYREQVQDIVYG
EECCCCCCCCCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
AMVK
HCCC
>Mature Secondary Structure
MLLNKLIFAAAAAAFTALATPLAAAPLAEARPEEVGFSTSGLARMDDFFAREIAAKRVPG
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
AVVAIARDGKLVHYKAYGQLDPVKGTPMPLDAIFALASMTKPMAAVAGLTLMEQGRLPLQ
EEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AKLADYYPAFADMKVGVVQADGALKLEPQARPILIHDLYRHTSGLMYGGRPDSASPVARL
HHHHHHCCCHHCCEEEEEECCCCEEECCCCCCCHHHHHHHHHCCCEECCCCCCCCCHHHH
YPDGIAPAIEGDTQAFIERITKLPLAHQPGTQFEYGFSIDVLGAVIEKVSEQRLGEYLAA
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
NVWKPLGMNDATFAPSDAQRPRLARPFPNDPLTGKPQAIRLLDTVTKSDCGGACSFATIG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH
DYIRFGQMLLNGGELDGARVLSPKTVHHMTANHLGPEIKNMVANVEPHRAGFGFGLGVAV
HHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEE
RTSEGLSAVPGNPGELSWNGAFGTQFFCDPKERLVVVVGTAAPGELRKYYREQVQDIVYG
EECCCCCCCCCCCCCEEECCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
AMVK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]