| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is suhB [H]
Identifier: 146338218
GI number: 146338218
Start: 1191963
End: 1192781
Strand: Reverse
Name: suhB [H]
Synonym: BRADO1117
Alternate gene names: 146338218
Gene position: 1192781-1191963 (Counterclockwise)
Preceding gene: 146338219
Following gene: 146338212
Centisome position: 16.0
GC content: 67.28
Gene sequence:
>819_bases GTGCGGTCAGCCCAGCGCATCGAGCACATGATTCATTCCGCCCTCATCAATGTCATGGTCAAGGCCGCGCGCCGCGCCGG CCGCAACCTCAAGCGCGATCTCGGCGAGATCGAGCACCTGCAGGTGTCGCTCAAAGGGCCGGCCAATTTCGTTTCCCGTG CCGACAAGAAGGCCGAGGAGATGCTCTATGAGGATCTCTCCAAGGCCCGGCCGGGCTACGGCTTCCTGGGCGAGGAAGGC GGCAAGCGCGAGGGCAGCGACAAGTCGCATACCTGGATCGTCGATCCGCTCGACGGCACCACCAACTTCCTGCACGGCAT CCCGCAATTCGCGATCTCGATCGCGCTCCAGCGCGAGGACACCGTGATCGCGGGCGTGATCTACAACCCGGCCAATGACG AGCTGTACATCGCCGAGCGCGGCAAGGGCGCGTTCCTCAACGACCAGCGGCTGCGCGTCGCCGCGCGCAAACAGCTGCAT GAATGCGTCATCGCCTGCGGCCTGCCGCATATCGGCCGCGGCGACCACCAGCTGTTCCTGCGCGAGATGACCTCGCTGCA GGTCAAGGTCGCCGGCCTGCGCCGCTTCGGCGCCGCCTCGCTCGACCTCGCCTTCGTCGCCGCCGGCCGCTTCGACGCCT ATTGGGAACGCGACCTGCAGCCCTGGGACATCGCGGCCGGCATGATCATGGTGCGCGAGGCCGGCGGCACGGTGTCGGGC ATCGACGGCAAGGAGGATGCGCTGGCGACCGGGCACGTCGTGTGCGGCAATGAGGTGATCCACCGCGAGCTGGTGAAGGT GCTGAAGGCGGCGGCGTAG
Upstream 100 bases:
>100_bases GGCCGGCCGATCCGCCCTTGACGCGGCGGCCCCTTCAGGGCACCCACAGCCAGCCATTTCCAACCGCCTCCCCGTTTTCC GGCGAGGCGCGCACCGCAAG
Downstream 100 bases:
>100_bases TTCGGTTGAACGACAACGGACATCGTTCCAGAAGACATTGGCGTGCTCGCGCCTCACTCTCGGTGTCGTCCCGGCCTCGA GCCGGGACCCATCACCACCG
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRSAQRIEHMIHSALINVMVKAARRAGRNLKRDLGEIEHLQVSLKGPANFVSRADKKAEEMLYEDLSKARPGYGFLGEEG GKREGSDKSHTWIVDPLDGTTNFLHGIPQFAISIALQREDTVIAGVIYNPANDELYIAERGKGAFLNDQRLRVAARKQLH ECVIACGLPHIGRGDHQLFLREMTSLQVKVAGLRRFGAASLDLAFVAAGRFDAYWERDLQPWDIAAGMIMVREAGGTVSG IDGKEDALATGHVVCGNEVIHRELVKVLKAAA
Sequences:
>Translated_272_residues MRSAQRIEHMIHSALINVMVKAARRAGRNLKRDLGEIEHLQVSLKGPANFVSRADKKAEEMLYEDLSKARPGYGFLGEEG GKREGSDKSHTWIVDPLDGTTNFLHGIPQFAISIALQREDTVIAGVIYNPANDELYIAERGKGAFLNDQRLRVAARKQLH ECVIACGLPHIGRGDHQLFLREMTSLQVKVAGLRRFGAASLDLAFVAAGRFDAYWERDLQPWDIAAGMIMVREAGGTVSG IDGKEDALATGHVVCGNEVIHRELVKVLKAAA >Mature_272_residues MRSAQRIEHMIHSALINVMVKAARRAGRNLKRDLGEIEHLQVSLKGPANFVSRADKKAEEMLYEDLSKARPGYGFLGEEG GKREGSDKSHTWIVDPLDGTTNFLHGIPQFAISIALQREDTVIAGVIYNPANDELYIAERGKGAFLNDQRLRVAARKQLH ECVIACGLPHIGRGDHQLFLREMTSLQVKVAGLRRFGAASLDLAFVAAGRFDAYWERDLQPWDIAAGMIMVREAGGTVSG IDGKEDALATGHVVCGNEVIHRELVKVLKAAA
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=254, Percent_Identity=33.0708661417323, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI221625487, Length=251, Percent_Identity=33.0677290836653, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI7657236, Length=258, Percent_Identity=34.4961240310078, Blast_Score=138, Evalue=4e-33, Organism=Homo sapiens, GI221625507, Length=164, Percent_Identity=33.5365853658537, Blast_Score=101, Evalue=7e-22, Organism=Escherichia coli, GI1788882, Length=255, Percent_Identity=38.0392156862745, Blast_Score=201, Evalue=6e-53, Organism=Caenorhabditis elegans, GI193202570, Length=271, Percent_Identity=32.8413284132841, Blast_Score=141, Evalue=3e-34, Organism=Caenorhabditis elegans, GI193202572, Length=268, Percent_Identity=32.4626865671642, Blast_Score=140, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6320493, Length=203, Percent_Identity=35.4679802955665, Blast_Score=132, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6321836, Length=214, Percent_Identity=29.4392523364486, Blast_Score=107, Evalue=3e-24, Organism=Drosophila melanogaster, GI24664922, Length=214, Percent_Identity=37.8504672897196, Blast_Score=147, Evalue=6e-36, Organism=Drosophila melanogaster, GI24664926, Length=232, Percent_Identity=32.7586206896552, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI24664918, Length=234, Percent_Identity=32.9059829059829, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI21357329, Length=259, Percent_Identity=30.8880308880309, Blast_Score=127, Evalue=6e-30, Organism=Drosophila melanogaster, GI21357957, Length=267, Percent_Identity=31.0861423220974, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI21357303, Length=206, Percent_Identity=32.0388349514563, Blast_Score=112, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29889; Mature: 29889
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAQRIEHMIHSALINVMVKAARRAGRNLKRDLGEIEHLQVSLKGPANFVSRADKKAEE CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHH MLYEDLSKARPGYGFLGEEGGKREGSDKSHTWIVDPLDGTTNFLHGIPQFAISIALQRED HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEECCC TVIAGVIYNPANDELYIAERGKGAFLNDQRLRVAARKQLHECVIACGLPHIGRGDHQLFL EEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH REMTSLQVKVAGLRRFGAASLDLAFVAAGRFDAYWERDLQPWDIAAGMIMVREAGGTVSG HHHHHHHHHHHHHHHCCCCHHHHEEEECCCCHHHHHCCCCCHHHHHCEEEEEECCCEEEC IDGKEDALATGHVVCGNEVIHRELVKVLKAAA CCCCCCHHHCCEEEECHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSAQRIEHMIHSALINVMVKAARRAGRNLKRDLGEIEHLQVSLKGPANFVSRADKKAEE CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHH MLYEDLSKARPGYGFLGEEGGKREGSDKSHTWIVDPLDGTTNFLHGIPQFAISIALQRED HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEECCC TVIAGVIYNPANDELYIAERGKGAFLNDQRLRVAARKQLHECVIACGLPHIGRGDHQLFL EEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH REMTSLQVKVAGLRRFGAASLDLAFVAAGRFDAYWERDLQPWDIAAGMIMVREAGGTVSG HHHHHHHHHHHHHHHCCCCHHHHEEEECCCCHHHHHCCCCCHHHHHCEEEEEECCCEEEC IDGKEDALATGHVVCGNEVIHRELVKVLKAAA CCCCCCHHHCCEEEECHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]