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The map label for this gene is mcp4 [H]

Identifier: 146338200

GI number: 146338200

Start: 1168139

End: 1170151

Strand: Reverse

Name: mcp4 [H]

Synonym: BRADO1098

Alternate gene names: 146338200

Gene position: 1170151-1168139 (Counterclockwise)

Preceding gene: 146338201

Following gene: 146338192

Centisome position: 15.69

GC content: 67.31

Gene sequence:

>2013_bases
TTGGCTCCTCACCTGTCCGGATACATCATGGCTCAGCCGCGTTTCTCGCTTGCGCTCCGCATCTACGCGATCATCGGTCT
GTCCTTCTGCGGGCTGGCAGGCCTCGCGGCGACACAGACGCAGAATCTGGAAACCGCATTGCGAGACCAGCGACAGAGCG
AGCTGGTGCATCTGACGCAGACCGCCGTCAGCATTGCCCGCGAGGAATATGACGCGATCGCGCGCGACAAGGTGGCGCCC
GAGGCCGCGCAGAAGAAGGCCGCCGAGCGCATCGGCAAGCTGCGTTACGGCAGCGGCGACTACTTCTGGATCAACGACAT
GGGTCCGAAGATGGTCATGCATCCGATCAAGCCGGAGCTGAACGGCCAGAGCCTCGCCGAGAATAAGGATCCCAACGGCA
AGCGGCTGTTCGTGGAGATGGTCGACGTGGTGAAGCGCCAGGGCGCCGGCGTCGTCGACTACATGTGGCCGAAGCCCGGC
AAGGAGGCGCCGCAGCCGAAGATGTCCTATGTCGCGGGCTTCGAGCCGTGGGGCTGGATCATCGGCACCGGCGTGTATGT
CGATGATCTCGAAGCCCAGGTCTGGGCGAGCAAGCGCGGCGTGTTCATCGCCGCAGTCCTGGTGATGCTGATCATCGGAT
CCATCACGCTGATCATCGCGCGGCGGATGTCGTCGGCCCTGGCTTCGATGAGCGGCGCGCTAACCGAGCTCGGCCACGGC
AATTTCGACATCAAGCTGCCGGGCCAGACCCGCAGCGACGAGCTCGGCGACATGGCGCGCTCGATCGAGCAGTTCCGGCT
GAAGACCGAGGAGAAGGCGCGGCAGACCGCGATGCTCGAGGACGAGCAGCGCCAGGTGGCCGAGCGCATCAAGAGCAAGG
CGCTGAAGGAGATGGCCGAGGCGGTCGAGCAGGCGGCCAGCAGGGCCGTCGGCGAGGTCGCCGAGGGCACCGGCCAGATG
GCCAGCAATGCAAAATCGATGACCGACAGCGCGCTCACCCTGGAGCGCAATTCGAGCAGCGTCGCGGCCGCCGCCGAACA
GGCGCTCGCCACGACACAGACCGTCGCCAAGGCCTCCTCGCAGCTGGCCGCCTCGATCTCTCAGATCTCGGCCCAGGTGA
ACTCCTCGCGCGAGCTGACACGCAAGGCGGTCTCCGCGTCGTCCGATGCCCAGGCGACGATCGCGAAGCTGTCGGAGGCC
GCCGACAAGGTCGGCGCCGTGACCAGCCTGATCAGTGAGATTGCCGGCCAGACCAACCTGCTGGCGCTGAACGCCACCAT
CGAGGCCGCCCGCGCCGGCGAAGCCGGTCGCGGCTTCGCCGTGGTCGCCTCGGAGGTGAAGTCACTGGCCGAGCAGACCG
CGAAGGCGACCAGCGAGATTGCACAGCAGATCGCCGAAATCCAGGACTCGACGCGCGCCTCGGTGACGTCGATCGGCGCG
ATCGGCGAGGTCATCCGCAACGTCGAGGCGGTGTCCTCGGGCATCGCCGATGCGATCCAGGCACAGAACAGCGTCACCAT
CGAGATCTCGCGCACCGTCGAGGAAACCTCGGCCGCGGCGCGCGAGGTGGCGAGCCAGATCGCCGAGGTCTCGCGCGAGG
CCAGCGAGGCCGGCCGGCGCTCGACCGACATTCGCGACGGCTCGGGCTCGGTCGCCGAAAAGGTCCAGCGCCTGCGCACA
GAGCTGGTGCGCGTCATCCGAACCTCGACAGCCGATGTCGACCGCCGCCTGTCGACCCGGCTGAACATCAATCGTCCGGG
CACGCTGCAGGTGAATGGCGCGCCAATCGCCATGACCGTGCGCAACCTGTCGCTCGGCGGCGCGCTGCTCGAGCAGATTC
CGACGAGGCTATCGGTCAACACGCCCGTCACGCTGGCGATCGCCGGCATGGTGTCCGATCTGCCGGGCACGGTGACCCGC
GTCGGCGATCGCACGGCGCTGGTGCAGTTCACGCTCAACGACGAGCAGACCGCGCGCCTGACGGCCCTGATCTCGGATCG
CCAGGCGGCGTGA

Upstream 100 bases:

>100_bases
AAATCCCGTAGAACTACGTGGCGGACAACGTCTGTTCGGCATGATGCTACCATGCGCACTTAACCGGGCATCAACTGCGA
TTCTTTAAAACTATTCGCAA

Downstream 100 bases:

>100_bases
TCCCCCAGGTCTGCTTCAGCGGAAGTGGCAGGCGACGAGGTGGCCCTCGTCGCTCGCCTTGAGGGGCGGCACTTCCCTGC
TGCAGATGTCTTTGGCGATC

Product: putative methyl-accepting chemotaxis receptor/sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 669

Protein sequence:

>670_residues
MAPHLSGYIMAQPRFSLALRIYAIIGLSFCGLAGLAATQTQNLETALRDQRQSELVHLTQTAVSIAREEYDAIARDKVAP
EAAQKKAAERIGKLRYGSGDYFWINDMGPKMVMHPIKPELNGQSLAENKDPNGKRLFVEMVDVVKRQGAGVVDYMWPKPG
KEAPQPKMSYVAGFEPWGWIIGTGVYVDDLEAQVWASKRGVFIAAVLVMLIIGSITLIIARRMSSALASMSGALTELGHG
NFDIKLPGQTRSDELGDMARSIEQFRLKTEEKARQTAMLEDEQRQVAERIKSKALKEMAEAVEQAASRAVGEVAEGTGQM
ASNAKSMTDSALTLERNSSSVAAAAEQALATTQTVAKASSQLAASISQISAQVNSSRELTRKAVSASSDAQATIAKLSEA
ADKVGAVTSLISEIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKSLAEQTAKATSEIAQQIAEIQDSTRASVTSIGA
IGEVIRNVEAVSSGIADAIQAQNSVTIEISRTVEETSAAAREVASQIAEVSREASEAGRRSTDIRDGSGSVAEKVQRLRT
ELVRVIRTSTADVDRRLSTRLNINRPGTLQVNGAPIAMTVRNLSLGGALLEQIPTRLSVNTPVTLAIAGMVSDLPGTVTR
VGDRTALVQFTLNDEQTARLTALISDRQAA

Sequences:

>Translated_670_residues
MAPHLSGYIMAQPRFSLALRIYAIIGLSFCGLAGLAATQTQNLETALRDQRQSELVHLTQTAVSIAREEYDAIARDKVAP
EAAQKKAAERIGKLRYGSGDYFWINDMGPKMVMHPIKPELNGQSLAENKDPNGKRLFVEMVDVVKRQGAGVVDYMWPKPG
KEAPQPKMSYVAGFEPWGWIIGTGVYVDDLEAQVWASKRGVFIAAVLVMLIIGSITLIIARRMSSALASMSGALTELGHG
NFDIKLPGQTRSDELGDMARSIEQFRLKTEEKARQTAMLEDEQRQVAERIKSKALKEMAEAVEQAASRAVGEVAEGTGQM
ASNAKSMTDSALTLERNSSSVAAAAEQALATTQTVAKASSQLAASISQISAQVNSSRELTRKAVSASSDAQATIAKLSEA
ADKVGAVTSLISEIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKSLAEQTAKATSEIAQQIAEIQDSTRASVTSIGA
IGEVIRNVEAVSSGIADAIQAQNSVTIEISRTVEETSAAAREVASQIAEVSREASEAGRRSTDIRDGSGSVAEKVQRLRT
ELVRVIRTSTADVDRRLSTRLNINRPGTLQVNGAPIAMTVRNLSLGGALLEQIPTRLSVNTPVTLAIAGMVSDLPGTVTR
VGDRTALVQFTLNDEQTARLTALISDRQAA
>Mature_669_residues
APHLSGYIMAQPRFSLALRIYAIIGLSFCGLAGLAATQTQNLETALRDQRQSELVHLTQTAVSIAREEYDAIARDKVAPE
AAQKKAAERIGKLRYGSGDYFWINDMGPKMVMHPIKPELNGQSLAENKDPNGKRLFVEMVDVVKRQGAGVVDYMWPKPGK
EAPQPKMSYVAGFEPWGWIIGTGVYVDDLEAQVWASKRGVFIAAVLVMLIIGSITLIIARRMSSALASMSGALTELGHGN
FDIKLPGQTRSDELGDMARSIEQFRLKTEEKARQTAMLEDEQRQVAERIKSKALKEMAEAVEQAASRAVGEVAEGTGQMA
SNAKSMTDSALTLERNSSSVAAAAEQALATTQTVAKASSQLAASISQISAQVNSSRELTRKAVSASSDAQATIAKLSEAA
DKVGAVTSLISEIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKSLAEQTAKATSEIAQQIAEIQDSTRASVTSIGAI
GEVIRNVEAVSSGIADAIQAQNSVTIEISRTVEETSAAAREVASQIAEVSREASEAGRRSTDIRDGSGSVAEKVQRLRTE
LVRVIRTSTADVDRRLSTRLNINRPGTLQVNGAPIAMTVRNLSLGGALLEQIPTRLSVNTPVTLAIAGMVSDLPGTVTRV
GDRTALVQFTLNDEQTARLTALISDRQAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=257, Percent_Identity=28.7937743190661, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1787690, Length=377, Percent_Identity=27.8514588859416, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788195, Length=238, Percent_Identity=32.7731092436975, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI2367378, Length=223, Percent_Identity=30.9417040358744, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1788194, Length=215, Percent_Identity=35.3488372093023, Blast_Score=87, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 71314; Mature: 71183

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPHLSGYIMAQPRFSLALRIYAIIGLSFCGLAGLAATQTQNLETALRDQRQSELVHLTQ
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVSIAREEYDAIARDKVAPEAAQKKAAERIGKLRYGSGDYFWINDMGPKMVMHPIKPEL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEECCCCEEEEECCCCHHEECCCCCCC
NGQSLAENKDPNGKRLFVEMVDVVKRQGAGVVDYMWPKPGKEAPQPKMSYVAGFEPWGWI
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCE
IGTGVYVDDLEAQVWASKRGVFIAAVLVMLIIGSITLIIARRMSSALASMSGALTELGHG
EECCEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NFDIKLPGQTRSDELGDMARSIEQFRLKTEEKARQTAMLEDEQRQVAERIKSKALKEMAE
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AVEQAASRAVGEVAEGTGQMASNAKSMTDSALTLERNSSSVAAAAEQALATTQTVAKASS
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
QLAASISQISAQVNSSRELTRKAVSASSDAQATIAKLSEAADKVGAVTSLISEIAGQTNL
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LALNATIEAARAGEAGRGFAVVASEVKSLAEQTAKATSEIAQQIAEIQDSTRASVTSIGA
EEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGEVIRNVEAVSSGIADAIQAQNSVTIEISRTVEETSAAAREVASQIAEVSREASEAGRR
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
STDIRDGSGSVAEKVQRLRTELVRVIRTSTADVDRRLSTRLNINRPGTLQVNGAPIAMTV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEE
RNLSLGGALLEQIPTRLSVNTPVTLAIAGMVSDLPGTVTRVGDRTALVQFTLNDEQTARL
ECCHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCHHHHCCCCEEEEEEEECCCCHHHH
TALISDRQAA
HHHHHCCCCC
>Mature Secondary Structure 
APHLSGYIMAQPRFSLALRIYAIIGLSFCGLAGLAATQTQNLETALRDQRQSELVHLTQ
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVSIAREEYDAIARDKVAPEAAQKKAAERIGKLRYGSGDYFWINDMGPKMVMHPIKPEL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEECCCCEEEEECCCCHHEECCCCCCC
NGQSLAENKDPNGKRLFVEMVDVVKRQGAGVVDYMWPKPGKEAPQPKMSYVAGFEPWGWI
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCE
IGTGVYVDDLEAQVWASKRGVFIAAVLVMLIIGSITLIIARRMSSALASMSGALTELGHG
EECCEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NFDIKLPGQTRSDELGDMARSIEQFRLKTEEKARQTAMLEDEQRQVAERIKSKALKEMAE
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AVEQAASRAVGEVAEGTGQMASNAKSMTDSALTLERNSSSVAAAAEQALATTQTVAKASS
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
QLAASISQISAQVNSSRELTRKAVSASSDAQATIAKLSEAADKVGAVTSLISEIAGQTNL
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LALNATIEAARAGEAGRGFAVVASEVKSLAEQTAKATSEIAQQIAEIQDSTRASVTSIGA
EEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGEVIRNVEAVSSGIADAIQAQNSVTIEISRTVEETSAAAREVASQIAEVSREASEAGRR
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
STDIRDGSGSVAEKVQRLRTELVRVIRTSTADVDRRLSTRLNINRPGTLQVNGAPIAMTV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEE
RNLSLGGALLEQIPTRLSVNTPVTLAIAGMVSDLPGTVTRVGDRTALVQFTLNDEQTARL
ECCHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCHHHHCCCCEEEEEEEECCCCHHHH
TALISDRQAA
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]