| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146338177
Identifier: 146338177
GI number: 146338177
Start: 1142507
End: 1143682
Strand: Direct
Name: 146338177
Synonym: BRADO1075
Alternate gene names: NA
Gene position: 1142507-1143682 (Clockwise)
Preceding gene: 146338176
Following gene: 146338178
Centisome position: 15.32
GC content: 64.46
Gene sequence:
>1176_bases ATGAATCATCATCCGCTGCCGGCTCCGCCGACGACTCCCTCCGATGCCAAGCGCGTGCTCGTCCTGCAGGGCGGCGGCGC GCTCGGCTCCTATCAGGCCGGCGCCTATCAGGCGCTGTGTCATTTCGATTTCGAGCCCGAATGGGTTGCCGGCATCTCGA TCGGCGCCATCAACTCCGCGATCATCGCGGGCAACGAGCGCGAGAAGCGCATCGAGCGGCTCAAGGAGTTCTGGCACATG GTCTCCTCGCCGGTGCCGTGGAAGCCGCTGGTCAATGGCGATCATCACCGTTCGGCGTTCAACGAGATCAGCGCCGGACT GATCGCTGCCTTCGGCGTGCCCGGCTTCTTCACGCCGCGCTTTCCGCCGGCGCCGCTGTGGCCGGCCGGCACGCCGCAAT CGGTCAGCTATTACGACACCGCGCCGCTGAAACGGACGCTGGAGCGGCTGGTCGATTTCGACCGCATCAACGATCTGAAG ACGCGATTGTCGGTCGGCGCCGTCGGCGTCACCACCGGCAACTTCACCTATTTCGACAATGTCGAATTCAAGAAGCAGGG CAAGCGGATCGGGCCCGAGCACATCATGGCCTCCGGCGCGCTGCCGCCCGGCTTCCCGCCGGTCGAGATCGACGGCGAGC ATTACTGGGACGGCGGCATCGCTTCCAACACGCCGCTCGACTACGTGCTCGACACCGAGACCGGCCGCGACCTGCTGATC TTCCAGGTCGATCTGTTCTCCGCGCGGGGCGACCTGCCGCGCACCTTGCTGGAGGCGGCCGAGCGCGAGAAGGACATCCG CTATTCCAGCCGCACGCGGATGAACACCGACAAGAACCGGATGATCCACAATACGCGCAAGGCGTTTCGCGAGCTCTATG CCAAGCTGCCGGAGGAGCTGCGCAACGATCCGTCGCTGGAGGTCCTGTGCAAGGCCGCGCAGGAGAACACCGTGACGGTG GTGCACCTGATCTATCGCAGCAAGAACTACGAGACGTCGTCGAAGGACTACGATTTCTCCCATGTCGCGATGGTCGAGCA TTGGGAGGCGGGCGTACGCGACGTGCATTCGTCGATGCGCCACAAGGACCAGCTGGAGCGCCCCCAGTCCGGCGAAACCA TGGTGACCTACGATCTCACGCAGGACGGCAACCTGGCTGCCGCCAAAAAGGAGTGA
Upstream 100 bases:
>100_bases GCCCCCCCGCTGGCCGGAAGCGACCTATTCCGGAGGTTGATTTGACGTTATCAGGAACTCACGCCACCTTGGCGCAACTG CTGATAACCGATCGATTGAC
Downstream 100 bases:
>100_bases AGCAATGACGACGAATTTGAAGGGCAAGACCGCGGTGGTTACCGGCTCGACCAGCGGCATCGGGCTTGCGATCGCCCGCG GCTTCGCCTCGGCCGGCGCC
Product: putative patatin-like phospholipase
Products: NA
Alternate protein names: Patatin-Like Phospholipase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Alpha/Beta Hydrolase; Transmembrane Protein; Esterase; Phospholipase Patatin Family; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; Patatin-Like Phospholipase Family; Esterase Of Alpha-Beta Hydrolase Superfamily; Serine Protease; Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Dehydrogenase/Reductase; Phospholipase Patatin Family Protein; Transpatatin- Like Phospholipase Domain-Containing Protein
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNHHPLPAPPTTPSDAKRVLVLQGGGALGSYQAGAYQALCHFDFEPEWVAGISIGAINSAIIAGNEREKRIERLKEFWHM VSSPVPWKPLVNGDHHRSAFNEISAGLIAAFGVPGFFTPRFPPAPLWPAGTPQSVSYYDTAPLKRTLERLVDFDRINDLK TRLSVGAVGVTTGNFTYFDNVEFKKQGKRIGPEHIMASGALPPGFPPVEIDGEHYWDGGIASNTPLDYVLDTETGRDLLI FQVDLFSARGDLPRTLLEAAEREKDIRYSSRTRMNTDKNRMIHNTRKAFRELYAKLPEELRNDPSLEVLCKAAQENTVTV VHLIYRSKNYETSSKDYDFSHVAMVEHWEAGVRDVHSSMRHKDQLERPQSGETMVTYDLTQDGNLAAAKKE
Sequences:
>Translated_391_residues MNHHPLPAPPTTPSDAKRVLVLQGGGALGSYQAGAYQALCHFDFEPEWVAGISIGAINSAIIAGNEREKRIERLKEFWHM VSSPVPWKPLVNGDHHRSAFNEISAGLIAAFGVPGFFTPRFPPAPLWPAGTPQSVSYYDTAPLKRTLERLVDFDRINDLK TRLSVGAVGVTTGNFTYFDNVEFKKQGKRIGPEHIMASGALPPGFPPVEIDGEHYWDGGIASNTPLDYVLDTETGRDLLI FQVDLFSARGDLPRTLLEAAEREKDIRYSSRTRMNTDKNRMIHNTRKAFRELYAKLPEELRNDPSLEVLCKAAQENTVTV VHLIYRSKNYETSSKDYDFSHVAMVEHWEAGVRDVHSSMRHKDQLERPQSGETMVTYDLTQDGNLAAAKKE >Mature_391_residues MNHHPLPAPPTTPSDAKRVLVLQGGGALGSYQAGAYQALCHFDFEPEWVAGISIGAINSAIIAGNEREKRIERLKEFWHM VSSPVPWKPLVNGDHHRSAFNEISAGLIAAFGVPGFFTPRFPPAPLWPAGTPQSVSYYDTAPLKRTLERLVDFDRINDLK TRLSVGAVGVTTGNFTYFDNVEFKKQGKRIGPEHIMASGALPPGFPPVEIDGEHYWDGGIASNTPLDYVLDTETGRDLLI FQVDLFSARGDLPRTLLEAAEREKDIRYSSRTRMNTDKNRMIHNTRKAFRELYAKLPEELRNDPSLEVLCKAAQENTVTV VHLIYRSKNYETSSKDYDFSHVAMVEHWEAGVRDVHSSMRHKDQLERPQSGETMVTYDLTQDGNLAAAKKE
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43790; Mature: 43790
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHHPLPAPPTTPSDAKRVLVLQGGGALGSYQAGAYQALCHFDFEPEWVAGISIGAINSA CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCE IIAGNEREKRIERLKEFWHMVSSPVPWKPLVNGDHHRSAFNEISAGLIAAFGVPGFFTPR EEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC FPPAPLWPAGTPQSVSYYDTAPLKRTLERLVDFDRINDLKTRLSVGAVGVTTGNFTYFDN CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEECC VEFKKQGKRIGPEHIMASGALPPGFPPVEIDGEHYWDGGIASNTPLDYVLDTETGRDLLI CHHHHCCCCCCHHHHHCCCCCCCCCCCEEECCCEEECCCCCCCCCCCEEEECCCCCEEEE FQVDLFSARGDLPRTLLEAAEREKDIRYSSRTRMNTDKNRMIHNTRKAFRELYAKLPEEL EEEEEHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RNDPSLEVLCKAAQENTVTVVHLIYRSKNYETSSKDYDFSHVAMVEHWEAGVRDVHSSMR CCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HKDQLERPQSGETMVTYDLTQDGNLAAAKKE HHHHHCCCCCCCEEEEEEECCCCCEECCCCC >Mature Secondary Structure MNHHPLPAPPTTPSDAKRVLVLQGGGALGSYQAGAYQALCHFDFEPEWVAGISIGAINSA CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCE IIAGNEREKRIERLKEFWHMVSSPVPWKPLVNGDHHRSAFNEISAGLIAAFGVPGFFTPR EEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC FPPAPLWPAGTPQSVSYYDTAPLKRTLERLVDFDRINDLKTRLSVGAVGVTTGNFTYFDN CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEECC VEFKKQGKRIGPEHIMASGALPPGFPPVEIDGEHYWDGGIASNTPLDYVLDTETGRDLLI CHHHHCCCCCCHHHHHCCCCCCCCCCCEEECCCEEECCCCCCCCCCCEEEECCCCCEEEE FQVDLFSARGDLPRTLLEAAEREKDIRYSSRTRMNTDKNRMIHNTRKAFRELYAKLPEEL EEEEEHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RNDPSLEVLCKAAQENTVTVVHLIYRSKNYETSSKDYDFSHVAMVEHWEAGVRDVHSSMR CCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HKDQLERPQSGETMVTYDLTQDGNLAAAKKE HHHHHCCCCCCCEEEEEEECCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA