Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146338113

Identifier: 146338113

GI number: 146338113

Start: 1077750

End: 1079102

Strand: Direct

Name: 146338113

Synonym: BRADO1009

Alternate gene names: NA

Gene position: 1077750-1079102 (Clockwise)

Preceding gene: 146338110

Following gene: 146338116

Centisome position: 14.45

GC content: 67.18

Gene sequence:

>1353_bases
GTGTCGTGGCTGCACGCGTCGGACTTGTCTGATGGGGAGTTCGCTATGCTCCAGGAGGCGTATCTGATGAACGTCGAGGG
CCGTGCTCCGGACACGCCGAACCTGGAGGCCGCCGGAGGAGCCGGCCGTCCCTGGGCGGAAGCCCCCGCCTATCTCCTCA
TCCTCGATCTCCTCGCAATATTCGCCGCGGTGACGCTGCCGTGGTCCACGACCGCCACCACGGTGCTGATGGTGGGCTGG
TCGATCGCGGTGATTCCGACGATCGATTGGGACGAGTTCATCAGAAGCCTGGCGCTTCCGGCCTGCGCGCTGCCGCTGGC
GCTGTTCGTCCTGGCCGATATCGGCGTGCTGTGGTCCGACGGGCCGTGGGAATTGGGCGTGCAAGCCGTCAATCCCGTGT
CGAAGCTGCTGCTGCTTCCCCTGCTGCTTTATCACTTCAGGCGCTCGGATCGCGCCCCCTGGGTGCTGATGAGCTTTGCG
ATGTCATCGGCCGTCATGATGATGCTGTCATGGGTCGCACTGGCAGATCCGTCGACGCTGGCAGCAGCCCTGCCGGTCGA
GCAGGCGCTCGGCTCGCATCAGCCCTTCACGCTGTGCGCGCTCGCGCTGGTGGGGCCGGCTCTCGCCGGCCATGCGAGGG
GGCAGACTGCCGCGGCGTTCGCCTTCGCAGGACTGAGCGCGCTGTTCCTGAGCCACGAACTGCTCGTCACGCCCGCGCAG
ACCGCCTGCGTCACCACCACCACTCTCGTGCTCGTGCTGGCCATACGCCATGTCAGCCGGCGCTTGGCGGTGCTGCTGTT
GGCGGCAGCGGCCTTGACCGGCAGTGTTGCGTGGGCGGCGTCTCCGTTGTTGAGCCGGCCGATCGTGCAAACCGTGGTGC
AGATGCATCTGTCGATTCTCACCGGCGACGGAGCCGCGGAGCGTCGGCCCGATTGGCGACGCGCCCTGGCGTCGCTTGCC
GAAGCGCCGCTGTTAGGTCACGGCACCGGCGCGATCCGTCCGCCTTTTGCCGCTGATGCTCGCGGACCCCTGGAGGTGCG
CGGCACCGGCCGCGATGCGCAGAGCCTGTCCGTCGCCTGGCAATGGGGACTGGCCGGTGTCGTCCTGCTCGCTGCAATGT
GGATCAGTCACATCCATCTGGTCCGCGGACGCGACGGGATCGGGTGGGTCGGATTGACGATCATCGTGCAGACCTGCGTC
GGCTCGATGCTGGGCTCCAATGTCGTCGGCGTCAATGAAGGCTGGATCTATGTGATCGGTCTCGGCGTAGCCGGCGGCGT
CGCCCTTCGGCGTCGGGCTGGGGATCCGGACAAGGCCCCGCGCCCTGCTTTGCCCGTTGGATCGGTTTTCTGA

Upstream 100 bases:

>100_bases
CGTGTGAAAAATTCCCACGTATTGAGGATCACGTTCAACCCACGGCCCGTGCCGCGGCCGGGGTGCCAGGGCGCGCTGCA
CCTGCTTCGCCGCCGTCCTG

Downstream 100 bases:

>100_bases
AAATCAGTCAATAGATTCAGATAAAAATAAATCACTTGCGCTCCCGGCTCATCATCGACAATGATGGCCGCGTCCTGTCC
CACGAGAGGGGCGAACGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: O-Antigen Ligase

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MSWLHASDLSDGEFAMLQEAYLMNVEGRAPDTPNLEAAGGAGRPWAEAPAYLLILDLLAIFAAVTLPWSTTATTVLMVGW
SIAVIPTIDWDEFIRSLALPACALPLALFVLADIGVLWSDGPWELGVQAVNPVSKLLLLPLLLYHFRRSDRAPWVLMSFA
MSSAVMMMLSWVALADPSTLAAALPVEQALGSHQPFTLCALALVGPALAGHARGQTAAAFAFAGLSALFLSHELLVTPAQ
TACVTTTTLVLVLAIRHVSRRLAVLLLAAAALTGSVAWAASPLLSRPIVQTVVQMHLSILTGDGAAERRPDWRRALASLA
EAPLLGHGTGAIRPPFAADARGPLEVRGTGRDAQSLSVAWQWGLAGVVLLAAMWISHIHLVRGRDGIGWVGLTIIVQTCV
GSMLGSNVVGVNEGWIYVIGLGVAGGVALRRRAGDPDKAPRPALPVGSVF

Sequences:

>Translated_450_residues
MSWLHASDLSDGEFAMLQEAYLMNVEGRAPDTPNLEAAGGAGRPWAEAPAYLLILDLLAIFAAVTLPWSTTATTVLMVGW
SIAVIPTIDWDEFIRSLALPACALPLALFVLADIGVLWSDGPWELGVQAVNPVSKLLLLPLLLYHFRRSDRAPWVLMSFA
MSSAVMMMLSWVALADPSTLAAALPVEQALGSHQPFTLCALALVGPALAGHARGQTAAAFAFAGLSALFLSHELLVTPAQ
TACVTTTTLVLVLAIRHVSRRLAVLLLAAAALTGSVAWAASPLLSRPIVQTVVQMHLSILTGDGAAERRPDWRRALASLA
EAPLLGHGTGAIRPPFAADARGPLEVRGTGRDAQSLSVAWQWGLAGVVLLAAMWISHIHLVRGRDGIGWVGLTIIVQTCV
GSMLGSNVVGVNEGWIYVIGLGVAGGVALRRRAGDPDKAPRPALPVGSVF
>Mature_449_residues
SWLHASDLSDGEFAMLQEAYLMNVEGRAPDTPNLEAAGGAGRPWAEAPAYLLILDLLAIFAAVTLPWSTTATTVLMVGWS
IAVIPTIDWDEFIRSLALPACALPLALFVLADIGVLWSDGPWELGVQAVNPVSKLLLLPLLLYHFRRSDRAPWVLMSFAM
SSAVMMMLSWVALADPSTLAAALPVEQALGSHQPFTLCALALVGPALAGHARGQTAAAFAFAGLSALFLSHELLVTPAQT
ACVTTTTLVLVLAIRHVSRRLAVLLLAAAALTGSVAWAASPLLSRPIVQTVVQMHLSILTGDGAAERRPDWRRALASLAE
APLLGHGTGAIRPPFAADARGPLEVRGTGRDAQSLSVAWQWGLAGVVLLAAMWISHIHLVRGRDGIGWVGLTIIVQTCVG
SMLGSNVVGVNEGWIYVIGLGVAGGVALRRRAGDPDKAPRPALPVGSVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47373; Mature: 47242

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLHASDLSDGEFAMLQEAYLMNVEGRAPDTPNLEAAGGAGRPWAEAPAYLLILDLLAI
CCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHH
FAAVTLPWSTTATTVLMVGWSIAVIPTIDWDEFIRSLALPACALPLALFVLADIGVLWSD
HHHHHCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
GPWELGVQAVNPVSKLLLLPLLLYHFRRSDRAPWVLMSFAMSSAVMMMLSWVALADPSTL
CCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
AAALPVEQALGSHQPFTLCALALVGPALAGHARGQTAAAFAFAGLSALFLSHELLVTPAQ
HHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEECCCH
TACVTTTTLVLVLAIRHVSRRLAVLLLAAAALTGSVAWAASPLLSRPIVQTVVQMHLSIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
TGDGAAERRPDWRRALASLAEAPLLGHGTGAIRPPFAADARGPLEVRGTGRDAQSLSVAW
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHH
QWGLAGVVLLAAMWISHIHLVRGRDGIGWVGLTIIVQTCVGSMLGSNVVGVNEGWIYVIG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEE
LGVAGGVALRRRAGDPDKAPRPALPVGSVF
ECCCCCHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SWLHASDLSDGEFAMLQEAYLMNVEGRAPDTPNLEAAGGAGRPWAEAPAYLLILDLLAI
CCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHH
FAAVTLPWSTTATTVLMVGWSIAVIPTIDWDEFIRSLALPACALPLALFVLADIGVLWSD
HHHHHCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
GPWELGVQAVNPVSKLLLLPLLLYHFRRSDRAPWVLMSFAMSSAVMMMLSWVALADPSTL
CCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
AAALPVEQALGSHQPFTLCALALVGPALAGHARGQTAAAFAFAGLSALFLSHELLVTPAQ
HHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEECCCH
TACVTTTTLVLVLAIRHVSRRLAVLLLAAAALTGSVAWAASPLLSRPIVQTVVQMHLSIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
TGDGAAERRPDWRRALASLAEAPLLGHGTGAIRPPFAADARGPLEVRGTGRDAQSLSVAW
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHH
QWGLAGVVLLAAMWISHIHLVRGRDGIGWVGLTIIVQTCVGSMLGSNVVGVNEGWIYVIG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEE
LGVAGGVALRRRAGDPDKAPRPALPVGSVF
ECCCCCHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA