The gene/protein map for NC_012668 is currently unavailable.
Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yejA [C]

Identifier: 146338106

GI number: 146338106

Start: 1067402

End: 1069246

Strand: Direct

Name: yejA [C]

Synonym: BRADO1002

Alternate gene names: 146338106

Gene position: 1067402-1069246 (Clockwise)

Preceding gene: 146338105

Following gene: 146338107

Centisome position: 14.31

GC content: 64.39

Gene sequence:

>1845_bases
ATGACCCCGGCGCTCGGCGCCGCCGCCAGCTTCGTTTCCGCCGACGCGGCGCAGGCGCAGGCCGGCGAGCAGTTGGTCTG
GCGCCACGGCCTGTCGCTGTTCGGCGAGGTGAAGTACCCGGCCGACTTCAAGCGATTCGACTACGTCAATCCCGACGCGC
CGAAGGGCGGCACGGCCCGGATGATCTCGCTCGGGACCTTCGACAACTTCAACATCGTCGTGATGTATGTGAAGGGCAAC
ATCGCGGTCGCGGCGGCGCAGATCTACGAGACCCTGATGACGCGGTCGCAGGACGAGATCTCGACCGAGTACGGCCTGCT
GGCCGAAGCCGCCTCCTACCCGGACGACTATTCCTGGGTGATCTACCGCCTGCGCAAGGACGCGCGCTGGCATGACGGCA
AACCGGTGACGCCCGAGGACGTCATCTTCTCGCTCGACGTGCTCAAGAAGAACAGCCCGTTCTACTCGTCCTACTACCGC
CATGTCGTCAAGACCGAGAAGACCGGCGACCTCGAGGTGAAGTTCACCTTCGACGGCCCGGGCAACCGCGAGCTGCCGCA
CATCGTCGGCGAACTGCTCGTGCTGCCCAAGCATTATTGGGAAGGCACCGACGCGCAGGGCCGCAAGCGCGACGTCACCG
CGACCACCCTGGAGCCGCCGCTCGGGTCGAGCCCCTACCGCATCAAGGACTTCGTGCCCGGCCGCTCGATCAAGCTGGAG
CGCGTGAAGGATTACTGGGGTGCCAACCTGCCGGTCCGCATCGGCCAGTACAATTTCGACGAGCTGCAGTTCGAGTATTT
CCGCGACAACCTCGTTGCGCTCGAAGCCTTCAAGGCCGACCAGGCGGACTGGATCAGCGAGAATTCGGCCAAGCAATGGG
CCACGGCCTATGACTTCCCGGCGATCACTGAGAAGCGCGCGGTCAAGGAGGAGTTTCCGGTCCGCGACTCCGGCCGCATG
CAGGGCTTCGTCTTCAACCTGCGCCGTCCGCAATTCCAGGACGCCCGGCTGCGCCGCGCCTTCAACTATGCGTTCGATTT
CGAGGAGATGAACAAGCAGCTGTTCTTCGGCCAATACAAGCGCATCAACAGCTATTTCGAGGGCACGGATTTGGCCTGCT
CCGGCCTGCCGCAGGGTCAGGAGCTGCAGATCCTCGAGGGCCTGCGCGGCCAGGTGCCGCCGGAGGTGTTCACCACCGTC
TACCAGAACCCGGTCGGCGGCAACCCCGAGAACGTCCGCGCCAATCTGCGCGAGGCGACCAGGCTCCTGAAGGACGCGGG
CTACGAGATCAAGGACCGCAAGCTGGTCGATCCCGCCGGCAAGCAGGTCGCGATCGAACTCCTGGTGCAGGATCCATCAT
CGGAGCGCATCGTGCTGTTCTACAAGCCGTCGCTGGAGCGGCTCGGCGTCACCGTCACGGTGCGCCAGGTCGACAATGTC
CAGTATGAGCAGCGCGCCCGCACCTTCGACTACGACATGATCATCGATACCTGGGGCCAGTCGCTGTCGCCCGGCAACGA
GCAGCGCGATTTCTGGGGCTCGAAGGCGGCCGATGAGCCGGGCTCGAAGAATGCGGTGGGCATCAAGAACCCCGCCATCG
ACGAACTGATCGAGAAGATCATCTTCGCCAAGGACCGCGCATCCCTGGAGGCCGCGACGCATGCGCTCGACCGCGTGCTG
CTGTGGAATTTCTACGTCGTGCCGCAGTTCACCTATCCGTTCGCGCGCAGCGCGCGCTGGGACCGCTTCAGCCATTTCGA
GCCGTTCCCGAAATTCGCCAGCAGCGGCTGGCCGTCACTGTGGTGGTTCGACGCCGACAAGGCTGCCAAGGTGAAGCGGT
CTTGA

Upstream 100 bases:

>100_bases
GGCCCAGGCCGGCCGAAGGCTCCCGAGCGATCTTATTCAGAGGAAGTCTCATTTGACGATTACCCGACGACAGCTGCTGC
AGAGCAGCGCCTTCGCTGCC

Downstream 100 bases:

>100_bases
GCACGATCTCGCATCTGTCCCGCCGCCGCGTGCTCGGGCTGGGCCTGGGCGCGCTCGGCGTCTCCTTGCTGAAGCCGGCG
AACGCCGCGGAATTCGGCCC

Product: oligopeptide ABC transporter periplasmic substrate-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MTPALGAAASFVSADAAQAQAGEQLVWRHGLSLFGEVKYPADFKRFDYVNPDAPKGGTARMISLGTFDNFNIVVMYVKGN
IAVAAAQIYETLMTRSQDEISTEYGLLAEAASYPDDYSWVIYRLRKDARWHDGKPVTPEDVIFSLDVLKKNSPFYSSYYR
HVVKTEKTGDLEVKFTFDGPGNRELPHIVGELLVLPKHYWEGTDAQGRKRDVTATTLEPPLGSSPYRIKDFVPGRSIKLE
RVKDYWGANLPVRIGQYNFDELQFEYFRDNLVALEAFKADQADWISENSAKQWATAYDFPAITEKRAVKEEFPVRDSGRM
QGFVFNLRRPQFQDARLRRAFNYAFDFEEMNKQLFFGQYKRINSYFEGTDLACSGLPQGQELQILEGLRGQVPPEVFTTV
YQNPVGGNPENVRANLREATRLLKDAGYEIKDRKLVDPAGKQVAIELLVQDPSSERIVLFYKPSLERLGVTVTVRQVDNV
QYEQRARTFDYDMIIDTWGQSLSPGNEQRDFWGSKAADEPGSKNAVGIKNPAIDELIEKIIFAKDRASLEAATHALDRVL
LWNFYVVPQFTYPFARSARWDRFSHFEPFPKFASSGWPSLWWFDADKAAKVKRS

Sequences:

>Translated_614_residues
MTPALGAAASFVSADAAQAQAGEQLVWRHGLSLFGEVKYPADFKRFDYVNPDAPKGGTARMISLGTFDNFNIVVMYVKGN
IAVAAAQIYETLMTRSQDEISTEYGLLAEAASYPDDYSWVIYRLRKDARWHDGKPVTPEDVIFSLDVLKKNSPFYSSYYR
HVVKTEKTGDLEVKFTFDGPGNRELPHIVGELLVLPKHYWEGTDAQGRKRDVTATTLEPPLGSSPYRIKDFVPGRSIKLE
RVKDYWGANLPVRIGQYNFDELQFEYFRDNLVALEAFKADQADWISENSAKQWATAYDFPAITEKRAVKEEFPVRDSGRM
QGFVFNLRRPQFQDARLRRAFNYAFDFEEMNKQLFFGQYKRINSYFEGTDLACSGLPQGQELQILEGLRGQVPPEVFTTV
YQNPVGGNPENVRANLREATRLLKDAGYEIKDRKLVDPAGKQVAIELLVQDPSSERIVLFYKPSLERLGVTVTVRQVDNV
QYEQRARTFDYDMIIDTWGQSLSPGNEQRDFWGSKAADEPGSKNAVGIKNPAIDELIEKIIFAKDRASLEAATHALDRVL
LWNFYVVPQFTYPFARSARWDRFSHFEPFPKFASSGWPSLWWFDADKAAKVKRS
>Mature_613_residues
TPALGAAASFVSADAAQAQAGEQLVWRHGLSLFGEVKYPADFKRFDYVNPDAPKGGTARMISLGTFDNFNIVVMYVKGNI
AVAAAQIYETLMTRSQDEISTEYGLLAEAASYPDDYSWVIYRLRKDARWHDGKPVTPEDVIFSLDVLKKNSPFYSSYYRH
VVKTEKTGDLEVKFTFDGPGNRELPHIVGELLVLPKHYWEGTDAQGRKRDVTATTLEPPLGSSPYRIKDFVPGRSIKLER
VKDYWGANLPVRIGQYNFDELQFEYFRDNLVALEAFKADQADWISENSAKQWATAYDFPAITEKRAVKEEFPVRDSGRMQ
GFVFNLRRPQFQDARLRRAFNYAFDFEEMNKQLFFGQYKRINSYFEGTDLACSGLPQGQELQILEGLRGQVPPEVFTTVY
QNPVGGNPENVRANLREATRLLKDAGYEIKDRKLVDPAGKQVAIELLVQDPSSERIVLFYKPSLERLGVTVTVRQVDNVQ
YEQRARTFDYDMIIDTWGQSLSPGNEQRDFWGSKAADEPGSKNAVGIKNPAIDELIEKIIFAKDRASLEAATHALDRVLL
WNFYVVPQFTYPFARSARWDRFSHFEPFPKFASSGWPSLWWFDADKAAKVKRS

Specific function: Possible binding-protein with either a transport or enzymatic activity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=599, Percent_Identity=38.3973288814691, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 70027; Mature: 69895

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPALGAAASFVSADAAQAQAGEQLVWRHGLSLFGEVKYPADFKRFDYVNPDAPKGGTAR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCHHHCCCCCCCCCCCCCEE
MISLGTFDNFNIVVMYVKGNIAVAAAQIYETLMTRSQDEISTEYGLLAEAASYPDDYSWV
EEEEECCCCCCEEEEEEECCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEE
IYRLRKDARWHDGKPVTPEDVIFSLDVLKKNSPFYSSYYRHVVKTEKTGDLEVKFTFDGP
EEEEHHCCCCCCCCCCCHHHHEEEEEHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
GNRELPHIVGELLVLPKHYWEGTDAQGRKRDVTATTLEPPLGSSPYRIKDFVPGRSIKLE
CCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEHH
RVKDYWGANLPVRIGQYNFDELQFEYFRDNLVALEAFKADQADWISENSAKQWATAYDFP
HHHHHHCCCCCEEECCCCHHHHHHHHHHCCEEEEEECCCCCCHHHCCCCHHHHHHHCCCC
AITEKRAVKEEFPVRDSGRMQGFVFNLRRPQFQDARLRRAFNYAFDFEEMNKQLFFGQYK
CHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEECHHHHHHHHHHHHHH
RINSYFEGTDLACSGLPQGQELQILEGLRGQVPPEVFTTVYQNPVGGNPENVRANLREAT
HHHHHCCCCCCEECCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH
RLLKDAGYEIKDRKLVDPAGKQVAIELLVQDPSSERIVLFYKPSLERLGVTVTVRQVDNV
HHHHHCCCCCCCCEECCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCC
QYEQRARTFDYDMIIDTWGQSLSPGNEQRDFWGSKAADEPGSKNAVGIKNPAIDELIEKI
CHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
IFAKDRASLEAATHALDRVLLWNFYVVPQFTYPFARSARWDRFSHFEPFPKFASSGWPSL
HHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHCCCCCEE
WWFDADKAAKVKRS
EEECCCCCHHCCCC
>Mature Secondary Structure 
TPALGAAASFVSADAAQAQAGEQLVWRHGLSLFGEVKYPADFKRFDYVNPDAPKGGTAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCHHHCCCCCCCCCCCCCEE
MISLGTFDNFNIVVMYVKGNIAVAAAQIYETLMTRSQDEISTEYGLLAEAASYPDDYSWV
EEEEECCCCCCEEEEEEECCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEE
IYRLRKDARWHDGKPVTPEDVIFSLDVLKKNSPFYSSYYRHVVKTEKTGDLEVKFTFDGP
EEEEHHCCCCCCCCCCCHHHHEEEEEHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
GNRELPHIVGELLVLPKHYWEGTDAQGRKRDVTATTLEPPLGSSPYRIKDFVPGRSIKLE
CCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEHH
RVKDYWGANLPVRIGQYNFDELQFEYFRDNLVALEAFKADQADWISENSAKQWATAYDFP
HHHHHHCCCCCEEECCCCHHHHHHHHHHCCEEEEEECCCCCCHHHCCCCHHHHHHHCCCC
AITEKRAVKEEFPVRDSGRMQGFVFNLRRPQFQDARLRRAFNYAFDFEEMNKQLFFGQYK
CHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEECHHHHHHHHHHHHHH
RINSYFEGTDLACSGLPQGQELQILEGLRGQVPPEVFTTVYQNPVGGNPENVRANLREAT
HHHHHCCCCCCEECCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH
RLLKDAGYEIKDRKLVDPAGKQVAIELLVQDPSSERIVLFYKPSLERLGVTVTVRQVDNV
HHHHHCCCCCCCCEECCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCC
QYEQRARTFDYDMIIDTWGQSLSPGNEQRDFWGSKAADEPGSKNAVGIKNPAIDELIEKI
CHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
IFAKDRASLEAATHALDRVLLWNFYVVPQFTYPFARSARWDRFSHFEPFPKFASSGWPSL
HHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHCCCCCEE
WWFDADKAAKVKRS
EEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]