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The map label for this gene is yngJ [H]

Identifier: 146338089

GI number: 146338089

Start: 1046746

End: 1047888

Strand: Direct

Name: yngJ [H]

Synonym: BRADO0985

Alternate gene names: 146338089

Gene position: 1046746-1047888 (Clockwise)

Preceding gene: 146338088

Following gene: 146338090

Centisome position: 14.04

GC content: 66.23

Gene sequence:

>1143_bases
ATGGATTTTGATCTCACCGAGGAGCAGCGCCTCCTCAAGGACAGCATCGACGGCCTGCTGGCGGATGCTTACGACTTCGA
CAAGCGCAAGCTGTACATGAAGGAGAAGGGCGGCTGGAGCCGCGCGATCTGGTCCAAGCTCGCAGAGCAGGGCCTGCTCG
GCCTGCCGTTCTCCGAGGAGGACGGCGGCTTCGGCGCCGGCGGCGTCGAGACCATGATCGTGATGGAGGCGATGGGCCGC
GCGCTGGTGCTCGAGCCGTATCTCGCGACCGTGGTGCTGTCGGGCGGCTTCCTCCGTCACGGCGGCTCGGCGGCGCAGAA
GGAAGCGCATCTGCCCGGCATCATCGACGGCAGCAAGACTTTTGCGTTTGCACAGCTCGAGAAGCAGTCGCGCTATGACC
TGTTCGATGTCGCGACGTCAGCCAAGAAGAAGGGCGACGGCTATGTCATCGACGGCGAGAAGTTCGTCGTGCTCAACGGC
GAGAACGCCGACACCCTGATCGTGACCGCGCGCACGTCAGGCGGCCAGCGCGACAAGTCGGGCATCGGCGTGTTCATCGT
GCCGGCGGACGCGAAGGGCGTCACCCGCAAGGGCTATCCGACCCAGGACGGCCTGCACGCCGCCGACGTCACCTTCACCG
GCGTCGAGGTCGGCGCTGACGCTGCGATCGGCGACCCCGCCAACGGCCTGCCGCTGATCGAGCGCGTCGTCGACGAGGCC
CGCATCGCGCTGTGCGCCGAGGCCGTCGGGCTGATGGACGAGTCTCTCAAGACCACGGTCGAGTACATCAAGACGCGCAA
GCAGTTCGGCGTCGCGATCGGCTCGTTCCAGTCGTTGCAGCACCGGGCGTCCGACATGTTCGTGGCGCTGGAGCAGGCCC
GCTCGATGTCGATGTTCGCCACCATGGCCGCCGAGTTCGACGACGCCAAGGAGCGCGCCACCTCGATCGCCGCGGCCAAA
GTGCAGATCGGCAAATCGGCCAAGTTCGTCGGCCAGCAGTCGATCCAGCTCCACGGCGGCATCGGCATGACCATGGAGGC
CAGGATCGGCCACTACTTCAAGCGCCTGACCATGATCGAGAGCAGCTTCGGCGACACCGACTACCACACCCGCCGCGTCA
GCGAAGCGGGCGGGTTGATCTAG

Upstream 100 bases:

>100_bases
GCCGGTGATTACTGGATCCCCGCTTTCGCGGGGATGACGAGTGAATGAATGGCGACAACGGCGCCGACAACAAACGCACG
CGTTCGAGAGAGCAACTCAC

Downstream 100 bases:

>100_bases
CTCACAAGTGACCCCGTCATTGCGAGGAGCGAAGCGCTTCGCTCGCAATGACGGCAGTGCAGGTTTCGTAGCCCGGATGA
GCGCAGCGATATCCGGGTTC

Product: putative acyl-CoA dehydrogenase/pimeloyl-CoA dehydrogenase pimD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MDFDLTEEQRLLKDSIDGLLADAYDFDKRKLYMKEKGGWSRAIWSKLAEQGLLGLPFSEEDGGFGAGGVETMIVMEAMGR
ALVLEPYLATVVLSGGFLRHGGSAAQKEAHLPGIIDGSKTFAFAQLEKQSRYDLFDVATSAKKKGDGYVIDGEKFVVLNG
ENADTLIVTARTSGGQRDKSGIGVFIVPADAKGVTRKGYPTQDGLHAADVTFTGVEVGADAAIGDPANGLPLIERVVDEA
RIALCAEAVGLMDESLKTTVEYIKTRKQFGVAIGSFQSLQHRASDMFVALEQARSMSMFATMAAEFDDAKERATSIAAAK
VQIGKSAKFVGQQSIQLHGGIGMTMEARIGHYFKRLTMIESSFGDTDYHTRRVSEAGGLI

Sequences:

>Translated_380_residues
MDFDLTEEQRLLKDSIDGLLADAYDFDKRKLYMKEKGGWSRAIWSKLAEQGLLGLPFSEEDGGFGAGGVETMIVMEAMGR
ALVLEPYLATVVLSGGFLRHGGSAAQKEAHLPGIIDGSKTFAFAQLEKQSRYDLFDVATSAKKKGDGYVIDGEKFVVLNG
ENADTLIVTARTSGGQRDKSGIGVFIVPADAKGVTRKGYPTQDGLHAADVTFTGVEVGADAAIGDPANGLPLIERVVDEA
RIALCAEAVGLMDESLKTTVEYIKTRKQFGVAIGSFQSLQHRASDMFVALEQARSMSMFATMAAEFDDAKERATSIAAAK
VQIGKSAKFVGQQSIQLHGGIGMTMEARIGHYFKRLTMIESSFGDTDYHTRRVSEAGGLI
>Mature_380_residues
MDFDLTEEQRLLKDSIDGLLADAYDFDKRKLYMKEKGGWSRAIWSKLAEQGLLGLPFSEEDGGFGAGGVETMIVMEAMGR
ALVLEPYLATVVLSGGFLRHGGSAAQKEAHLPGIIDGSKTFAFAQLEKQSRYDLFDVATSAKKKGDGYVIDGEKFVVLNG
ENADTLIVTARTSGGQRDKSGIGVFIVPADAKGVTRKGYPTQDGLHAADVTFTGVEVGADAAIGDPANGLPLIERVVDEA
RIALCAEAVGLMDESLKTTVEYIKTRKQFGVAIGSFQSLQHRASDMFVALEQARSMSMFATMAAEFDDAKERATSIAAAK
VQIGKSAKFVGQQSIQLHGGIGMTMEARIGHYFKRLTMIESSFGDTDYHTRRVSEAGGLI

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=28.5333333333333, Blast_Score=135, Evalue=7e-32,
Organism=Homo sapiens, GI226958414, Length=336, Percent_Identity=29.4642857142857, Blast_Score=128, Evalue=7e-30,
Organism=Homo sapiens, GI4557233, Length=379, Percent_Identity=26.9129287598945, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI4501857, Length=318, Percent_Identity=27.3584905660377, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI4501859, Length=327, Percent_Identity=28.1345565749235, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI7656849, Length=363, Percent_Identity=23.9669421487603, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI76496475, Length=341, Percent_Identity=26.6862170087977, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4557235, Length=341, Percent_Identity=26.6862170087977, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI187960098, Length=357, Percent_Identity=25.4901960784314, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI4557231, Length=357, Percent_Identity=25.4901960784314, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI21361497, Length=341, Percent_Identity=26.3929618768328, Blast_Score=82, Evalue=8e-16,
Organism=Escherichia coli, GI87081958, Length=359, Percent_Identity=25.3481894150418, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786223, Length=368, Percent_Identity=25, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=384, Percent_Identity=28.90625, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17569725, Length=364, Percent_Identity=27.7472527472527, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=350, Percent_Identity=28, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=365, Percent_Identity=27.6712328767123, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17570075, Length=360, Percent_Identity=26.6666666666667, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=330, Percent_Identity=25.4545454545455, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=383, Percent_Identity=26.1096605744125, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=260, Percent_Identity=30, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=339, Percent_Identity=25.9587020648968, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=352, Percent_Identity=22.4431818181818, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=343, Percent_Identity=25.6559766763848, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=235, Percent_Identity=28.936170212766, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=245, Percent_Identity=27.3469387755102, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=340, Percent_Identity=23.8235294117647, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17534353, Length=387, Percent_Identity=22.9974160206718, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355753, Length=333, Percent_Identity=30.9309309309309, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI21356377, Length=368, Percent_Identity=28.2608695652174, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24666513, Length=362, Percent_Identity=26.7955801104972, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24646207, Length=372, Percent_Identity=25.5376344086022, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24660351, Length=364, Percent_Identity=26.0989010989011, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281363737, Length=384, Percent_Identity=25, Blast_Score=92, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40874; Mature: 40874

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDLTEEQRLLKDSIDGLLADAYDFDKRKLYMKEKGGWSRAIWSKLAEQGLLGLPFSEE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCEECCCCCC
DGGFGAGGVETMIVMEAMGRALVLEPYLATVVLSGGFLRHGGSAAQKEAHLPGIIDGSKT
CCCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEECCCCC
FAFAQLEKQSRYDLFDVATSAKKKGDGYVIDGEKFVVLNGENADTLIVTARTSGGQRDKS
EEEEEHHHCCCCCHHHHHHHHHCCCCCEEECCCEEEEEECCCCCEEEEEEECCCCCCCCC
GIGVFIVPADAKGVTRKGYPTQDGLHAADVTFTGVEVGADAAIGDPANGLPLIERVVDEA
CCEEEEEECCCCCCCCCCCCCCCCCEECCEEEECEEECCCCCCCCCCCCCHHHHHHHHHH
RIALCAEAVGLMDESLKTTVEYIKTRKQFGVAIGSFQSLQHRASDMFVALEQARSMSMFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMAAEFDDAKERATSIAAAKVQIGKSAKFVGQQSIQLHGGIGMTMEARIGHYFKRLTMIE
HHHHHHHHHHHHHHHHHHHHEEECCCHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHH
SSFGDTDYHTRRVSEAGGLI
HCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MDFDLTEEQRLLKDSIDGLLADAYDFDKRKLYMKEKGGWSRAIWSKLAEQGLLGLPFSEE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCEECCCCCC
DGGFGAGGVETMIVMEAMGRALVLEPYLATVVLSGGFLRHGGSAAQKEAHLPGIIDGSKT
CCCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEECCCCC
FAFAQLEKQSRYDLFDVATSAKKKGDGYVIDGEKFVVLNGENADTLIVTARTSGGQRDKS
EEEEEHHHCCCCCHHHHHHHHHCCCCCEEECCCEEEEEECCCCCEEEEEEECCCCCCCCC
GIGVFIVPADAKGVTRKGYPTQDGLHAADVTFTGVEVGADAAIGDPANGLPLIERVVDEA
CCEEEEEECCCCCCCCCCCCCCCCCEECCEEEECEEECCCCCCCCCCCCCHHHHHHHHHH
RIALCAEAVGLMDESLKTTVEYIKTRKQFGVAIGSFQSLQHRASDMFVALEQARSMSMFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMAAEFDDAKERATSIAAAKVQIGKSAKFVGQQSIQLHGGIGMTMEARIGHYFKRLTMIE
HHHHHHHHHHHHHHHHHHHHEEECCCHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHH
SSFGDTDYHTRRVSEAGGLI
HCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]