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The map label for this gene is siaP [H]

Identifier: 146338061

GI number: 146338061

Start: 1015154

End: 1016221

Strand: Direct

Name: siaP [H]

Synonym: BRADO0956

Alternate gene names: 146338061

Gene position: 1015154-1016221 (Clockwise)

Preceding gene: 146338059

Following gene: 146338062

Centisome position: 13.61

GC content: 63.76

Gene sequence:

>1068_bases
ATGAAGCAAAGGGCCCTCGAAGGCCCGCGATGGAAGGAGACGACCCCGATGAGGAAGACGCTTCTGGCGTTGGCGCTGGC
TGCCGGTGTGACCACCCCCGCGCTCGCGCAGGACAAGACGTTCGATCTGAAGATTTCGCACTGGGTCCCTGCCAGCCATC
CGCTGCAGAAGGCGCTGGAAGATTGGGCCGCGTCGGTCGAGAAGGCCTCCGGCGGCACCATCAAGGGCAAGGTGTTCCCG
GCGCAGCAGCTCGGCAAGGCGTTCGATCATTACGACATGGCGCGCGACGGCATCGCGGATGTCACTTATGTGAATCCCGG
CTATCAGCCCGGCCGCTTCCCGATCATCGGCGCCGGCGAGCTGCCGTTCCTGGTCTCCGACGCCAAGGGCGGCTCGGAAG
GCCTCGACGCGTGGTACCGCAAATATGCCGAGAAGGAGATGAAGGACGTCAAATACTGCCTCGCCTTCGTGCATACGCCG
TCGTCGCTGCATACGCGCACCAAGAAGGTGACGATGCCGGAGGATCTCAAGGGCATGAAGATCCGCCCCGCGGATGCGAC
GATCGCGAACTTCGTCACCCAGCTCGGCGGCACCAACGTGCAGTCGTCGGCGCCGGAAGTGCGCGACATCATCGAGCGTG
GCGTCGCCGACGGCGTGTTCTTCCCGGCCGGCTCGCTGGTGCTGTTCGGCGTCGACAAGGTCACCAAATTCCACATCGAC
GCGCCGATGTATGTGACGACCTTCGTGTTCGTCATGAACAAGGACAAGTACAACCAGATGTCGGCGATGCAGAAGAAGGC
GATCGACGACAACTGCAACACGGAGACCGCCGGCAAGGTCGGCGAGCCCTGGGGCAAGTTCGAGGATGCCGGCGTCGACA
AGATCAAGGCGGAGTCAGGCCAGGAGGTCTACAAGCTGACGCCGGAGCAGACCGCGGCCTGGAAGAAGGCCTCCGAGCCG
CTCTTCAAGACCTGGGCCGACGGCGTCAAGAAGACCGGTATCGACGCCGACGCCGCCATGACCGAGCTGAAGGCCTCGCT
CGCCAAGTACAACGCGCTGGCGCAGTAG

Upstream 100 bases:

>100_bases
CTGCCAGACTTGCCTCTGCCGCGACGATCGGCTCCGCTCGGCGCGTGCAGCGGCGGCAGGCCTGCCGTCCCGCTTGCAAT
GATGGTTATATGCTATAACA

Downstream 100 bases:

>100_bases
CTCTCATCGCATTCAACTGTTGCGCGGCGGACGGTGCGCCCCCTCTCCCCGTTCTTCACGGGGAGAGGGAGTTCACCGAC
AGCTGCGCAGCAGCTCGCTC

Product: TRAP dicarboxylate family transporter subunit DctP

Products: NA

Alternate protein names: Extracytoplasmic solute receptor protein siaP; N-acetylneuraminic-binding protein; Neu5Ac-binding protein [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKQRALEGPRWKETTPMRKTLLALALAAGVTTPALAQDKTFDLKISHWVPASHPLQKALEDWAASVEKASGGTIKGKVFP
AQQLGKAFDHYDMARDGIADVTYVNPGYQPGRFPIIGAGELPFLVSDAKGGSEGLDAWYRKYAEKEMKDVKYCLAFVHTP
SSLHTRTKKVTMPEDLKGMKIRPADATIANFVTQLGGTNVQSSAPEVRDIIERGVADGVFFPAGSLVLFGVDKVTKFHID
APMYVTTFVFVMNKDKYNQMSAMQKKAIDDNCNTETAGKVGEPWGKFEDAGVDKIKAESGQEVYKLTPEQTAAWKKASEP
LFKTWADGVKKTGIDADAAMTELKASLAKYNALAQ

Sequences:

>Translated_355_residues
MKQRALEGPRWKETTPMRKTLLALALAAGVTTPALAQDKTFDLKISHWVPASHPLQKALEDWAASVEKASGGTIKGKVFP
AQQLGKAFDHYDMARDGIADVTYVNPGYQPGRFPIIGAGELPFLVSDAKGGSEGLDAWYRKYAEKEMKDVKYCLAFVHTP
SSLHTRTKKVTMPEDLKGMKIRPADATIANFVTQLGGTNVQSSAPEVRDIIERGVADGVFFPAGSLVLFGVDKVTKFHID
APMYVTTFVFVMNKDKYNQMSAMQKKAIDDNCNTETAGKVGEPWGKFEDAGVDKIKAESGQEVYKLTPEQTAAWKKASEP
LFKTWADGVKKTGIDADAAMTELKASLAKYNALAQ
>Mature_355_residues
MKQRALEGPRWKETTPMRKTLLALALAAGVTTPALAQDKTFDLKISHWVPASHPLQKALEDWAASVEKASGGTIKGKVFP
AQQLGKAFDHYDMARDGIADVTYVNPGYQPGRFPIIGAGELPFLVSDAKGGSEGLDAWYRKYAEKEMKDVKYCLAFVHTP
SSLHTRTKKVTMPEDLKGMKIRPADATIANFVTQLGGTNVQSSAPEVRDIIERGVADGVFFPAGSLVLFGVDKVTKFHID
APMYVTTFVFVMNKDKYNQMSAMQKKAIDDNCNTETAGKVGEPWGKFEDAGVDKIKAESGQEVYKLTPEQTAAWKKASEP
LFKTWADGVKKTGIDADAAMTELKASLAKYNALAQ

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid. This protein specifically binds sialic acid [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 38801; Mature: 38801

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRALEGPRWKETTPMRKTLLALALAAGVTTPALAQDKTFDLKISHWVPASHPLQKALE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
DWAASVEKASGGTIKGKVFPAQQLGKAFDHYDMARDGIADVTYVNPGYQPGRFPIIGAGE
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCC
LPFLVSDAKGGSEGLDAWYRKYAEKEMKDVKYCLAFVHTPSSLHTRTKKVTMPEDLKGMK
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCE
IRPADATIANFVTQLGGTNVQSSAPEVRDIIERGVADGVFFPAGSLVLFGVDKVTKFHID
ECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEECCCCCEEEEECCHHEEEECC
APMYVTTFVFVMNKDKYNQMSAMQKKAIDDNCNTETAGKVGEPWGKFEDAGVDKIKAESG
CCHHHHHEEHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
QEVYKLTPEQTAAWKKASEPLFKTWADGVKKTGIDADAAMTELKASLAKYNALAQ
CCEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQRALEGPRWKETTPMRKTLLALALAAGVTTPALAQDKTFDLKISHWVPASHPLQKALE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
DWAASVEKASGGTIKGKVFPAQQLGKAFDHYDMARDGIADVTYVNPGYQPGRFPIIGAGE
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCC
LPFLVSDAKGGSEGLDAWYRKYAEKEMKDVKYCLAFVHTPSSLHTRTKKVTMPEDLKGMK
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCE
IRPADATIANFVTQLGGTNVQSSAPEVRDIIERGVADGVFFPAGSLVLFGVDKVTKFHID
ECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEECCCCCEEEEECCHHEEEECC
APMYVTTFVFVMNKDKYNQMSAMQKKAIDDNCNTETAGKVGEPWGKFEDAGVDKIKAESG
CCHHHHHEEHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
QEVYKLTPEQTAAWKKASEPLFKTWADGVKKTGIDADAAMTELKASLAKYNALAQ
CCEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA