Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146338057

Identifier: 146338057

GI number: 146338057

Start: 1011806

End: 1012534

Strand: Direct

Name: 146338057

Synonym: BRADO0952

Alternate gene names: NA

Gene position: 1011806-1012534 (Clockwise)

Preceding gene: 146338056

Following gene: 146338059

Centisome position: 13.57

GC content: 66.39

Gene sequence:

>729_bases
ATGATCACGTTGTTCGGTCTGGGCGCGGGTTTCGGCCTGCCGGAGATCAGCCCCTTCGTCACCAAGACGGAGGTGCAGCT
GAAGATGGCCGGATTGGCCTATCGGAAGCAGCGCGCGATGCCGCCGGCCTCGCCGAAGGGACAACTGCCCTTCATCGACG
ACGGCGGTGAGCTGATCGCCGACAGCACCTTCATCCGCGCGCATGTCGAGCGCAAATATGACTTCGATTTCGATACTGGC
CTCGACATGCGCGCCCGGGCTCAAGCCTGGGCGTTCGAGCGCATGATCGAGCATCATCTGTATTTCGCCCTCGTCGGTTC
TCGCTGGGTCGATCCGGTCAACTTCGCCAAGGGGCCGGCGCATTTCTTCGACGGCGTGCCGGCCGACCGCCGCGAGAAGC
TGCGCGAGGACGCGCAGTTTCGCGTCGCCGAGAACTATTTGATCTCCGGGCTCGGCCGCCACGCCCCCGACGAGGACATC
GACCTCGCGGCGCGCTCGCTGCGCGCGTTGTCGGTGCAACTCGGCGAGCGGCCCTATCTGATGGGCGACCGCCCCTGCGG
CACCGACGCCACGGCGTTCGCCGTCATCGCCGGCATCCTCACGCCGTTCTTCGACTCCGAGCTGCGGCGCCGGACGGAGG
GCTTCGGCAACCTCTTGGCCTACGTCGATCGCGTGATGGCGACGTACTTTCCGGAGTTCGAGTGGGGCAGGGCGGCCGAG
GCAGCGTAA

Upstream 100 bases:

>100_bases
GCCTGGACCTGGCCACCACGCTATTGCCGCTGCTGACAGCATGGTGGCAGCAGCATGTTCGTAGCGTTCGCCGTCTGCTC
AGGAAGTCGGGAGTGCTGTC

Downstream 100 bases:

>100_bases
GCTTGACGACCGCTTCCAGATGCTTGGCACATCATCAATGGACATCCAGCTGTCATCGCCCGCGAAAGCGGGCGATCCAG
TACGCCGTGTCCGCGGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Transport Complex /Metaxin

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MITLFGLGAGFGLPEISPFVTKTEVQLKMAGLAYRKQRAMPPASPKGQLPFIDDGGELIADSTFIRAHVERKYDFDFDTG
LDMRARAQAWAFERMIEHHLYFALVGSRWVDPVNFAKGPAHFFDGVPADRREKLREDAQFRVAENYLISGLGRHAPDEDI
DLAARSLRALSVQLGERPYLMGDRPCGTDATAFAVIAGILTPFFDSELRRRTEGFGNLLAYVDRVMATYFPEFEWGRAAE
AA

Sequences:

>Translated_242_residues
MITLFGLGAGFGLPEISPFVTKTEVQLKMAGLAYRKQRAMPPASPKGQLPFIDDGGELIADSTFIRAHVERKYDFDFDTG
LDMRARAQAWAFERMIEHHLYFALVGSRWVDPVNFAKGPAHFFDGVPADRREKLREDAQFRVAENYLISGLGRHAPDEDI
DLAARSLRALSVQLGERPYLMGDRPCGTDATAFAVIAGILTPFFDSELRRRTEGFGNLLAYVDRVMATYFPEFEWGRAAE
AA
>Mature_242_residues
MITLFGLGAGFGLPEISPFVTKTEVQLKMAGLAYRKQRAMPPASPKGQLPFIDDGGELIADSTFIRAHVERKYDFDFDTG
LDMRARAQAWAFERMIEHHLYFALVGSRWVDPVNFAKGPAHFFDGVPADRREKLREDAQFRVAENYLISGLGRHAPDEDI
DLAARSLRALSVQLGERPYLMGDRPCGTDATAFAVIAGILTPFFDSELRRRTEGFGNLLAYVDRVMATYFPEFEWGRAAE
AA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI24308336, Length=226, Percent_Identity=27.8761061946903, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI5729937, Length=196, Percent_Identity=26.0204081632653, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI38569475, Length=246, Percent_Identity=28.0487804878049, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17537617, Length=228, Percent_Identity=30.7017543859649, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25149474, Length=223, Percent_Identity=26.9058295964126, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28574889, Length=254, Percent_Identity=29.9212598425197, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI62472216, Length=244, Percent_Identity=30.327868852459, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI28574891, Length=210, Percent_Identity=30, Blast_Score=80, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27084; Mature: 27084

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLFGLGAGFGLPEISPFVTKTEVQLKMAGLAYRKQRAMPPASPKGQLPFIDDGGELIA
CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHH
DSTFIRAHVERKYDFDFDTGLDMRARAQAWAFERMIEHHLYFALVGSRWVDPVNFAKGPA
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCH
HFFDGVPADRREKLREDAQFRVAENYLISGLGRHAPDEDIDLAARSLRALSVQLGERPYL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
MGDRPCGTDATAFAVIAGILTPFFDSELRRRTEGFGNLLAYVDRVMATYFPEFEWGRAAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AA
CC
>Mature Secondary Structure
MITLFGLGAGFGLPEISPFVTKTEVQLKMAGLAYRKQRAMPPASPKGQLPFIDDGGELIA
CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHH
DSTFIRAHVERKYDFDFDTGLDMRARAQAWAFERMIEHHLYFALVGSRWVDPVNFAKGPA
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCH
HFFDGVPADRREKLREDAQFRVAENYLISGLGRHAPDEDIDLAARSLRALSVQLGERPYL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
MGDRPCGTDATAFAVIAGILTPFFDSELRRRTEGFGNLLAYVDRVMATYFPEFEWGRAAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA