| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gsiB [H]
Identifier: 146338009
GI number: 146338009
Start: 961415
End: 962998
Strand: Reverse
Name: gsiB [H]
Synonym: BRADO0902
Alternate gene names: 146338009
Gene position: 962998-961415 (Counterclockwise)
Preceding gene: 146338020
Following gene: 146338006
Centisome position: 12.91
GC content: 63.7
Gene sequence:
>1584_bases TTGTCCTTGCTCGCCGCCGCTCTTGCGCTCGGCCTTTCAGCCGTTGCGGCCCGCGCCGAAACTGTTCTGCGCTACGGCAT CTCGATGGCCGACATCCCGCTCACGACAGGCCAGCCCGACCGCGGCGCCGGCGCCTATCAGTTTACCGGCTACACGATCT ACGATCCGCTTGTCGCGTGGGACATGAGCGTCGCCGACAAGCCCGGCAAGCTGATCCCCGGCCTCGCCACCGAGTGGAAG GTCGACGACGCCGACAAGAAGAAGTGGCGCTTCACCTTGCGCAAGGGCGTCAAGTTCCACGACGGCAGCGACTTCAATGC CGACGCAGTGATCTGGAATCTGGACAAGGTGCTCAACGATAAGGCACCGCAGTTCGACAAGCGGCAGAGCGCACAGGTCA AGACGCGGCTGCCCTCGGTCGCGAGCTACGCCAAGATCGACGACTCCACCGTGGAGATCACGACCAAGACGGTCGACTCG TTCTTTCCTTATCAGATGCTGTGGTTCCTGATTTCGAGCCCGGCGCAGTATGAGAAGCTCGGCAAGGACTGGGACAAGTT CGCCAGCCAGCCCTCGGGCACCGGCCCGTTCAAGCTGACCAGACTGGTGCCGCGCGAGCTCGCGGAACTGTCAAGGAATT CCGAATATTGGAACAAGGACCGGATCCCGAAGACGGACAAGCTGGTGCTGGTGCCGATGCCGGAAGCGCTGACGCGTACC AACGCGCTGCTCGCCGGCCAGGTCGATCTGATCGAGACCCCCGCGCCGGACGCCGTGCCGCAGCTCAAGGCCGCCGGCAT GAAGCTCGTCGACAACGTCACGCCGCATGTCTGGAACTACCATCTCAGCGTTCTTCCAGGCTCGCCCTGGACCGACATCC GCCTCCGCAAGGCCCTCAACCTCGCGATCAACCGCGACGAGGTCGTCGGCCTGATGAACGGTCTCGCCAAGCCGGCCAAG GGCCAGGTCGACCCGTCGAGCCCGTGGTTCGGCAAGCCGACCTTCGAGCTGAAATATGATCTCGCTGCGGCCAAGAAGCT GGTCGAGGAAGCCGGCTACTCGCCGGCCAAGCCGCTGAAGACCACCTTCATCATCGCGCAGGGCGGCACCGGGCAGATGC TGTCGCTGCCGATGAACGAGTTCCTGCAGCAGAGCTTCAAGGAGATCGGCATCGACATCGACTTCAAGGTCGTCGAGCTG GAGACGCTGTACACGCACTGGCGCAAGGGCGCGGCGGACGAGATGAACGCCGGCATCACCGCCAACAACATCGCCTATGT CACGTCCGATCCGCTCTACGCCATCGTGCGCTTCTTCGCCTCCGACCAGATCGCGCCGACAGGCGTCAACTGGGGTGGCT ACAAGAACCCGAAGGTCGATGCGCTGATCGCCGAGGCGAAGCAGACGTTCGATCCCGCCAAGCAGGACGAGCTGATCGCG CAGGCGCATGCGGCTGTCGTCGATGATGCCGTGCTGGTCTGGGTCGTGCACGACACCAATCCGCACGCGCTGTCGCCGAA GGTGAAGACATTCGTCCAGGCCCAGCACTGGTTCCAGGACCTGACGACGATCGGGGCGGAGTAG
Upstream 100 bases:
>100_bases TGTGCTCAAACGATCCCGCGGGGCTTGGCACCCGGATTGCAGGTTTGGCTCATCGAATTTGATCCGGTTTCCACGGAGCT TCACCCTGATGCGTATGAAA
Downstream 100 bases:
>100_bases TGAACCGTCGTTCCGGCCTCGAGCCGGGACCCATATTCCGCGGCGGCGGTTGGCGGGCTGGCTAATGCCACGACCAGCGC GGCCACCAATCAAAGCCGGT
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MSLLAAALALGLSAVAARAETVLRYGISMADIPLTTGQPDRGAGAYQFTGYTIYDPLVAWDMSVADKPGKLIPGLATEWK VDDADKKKWRFTLRKGVKFHDGSDFNADAVIWNLDKVLNDKAPQFDKRQSAQVKTRLPSVASYAKIDDSTVEITTKTVDS FFPYQMLWFLISSPAQYEKLGKDWDKFASQPSGTGPFKLTRLVPRELAELSRNSEYWNKDRIPKTDKLVLVPMPEALTRT NALLAGQVDLIETPAPDAVPQLKAAGMKLVDNVTPHVWNYHLSVLPGSPWTDIRLRKALNLAINRDEVVGLMNGLAKPAK GQVDPSSPWFGKPTFELKYDLAAAKKLVEEAGYSPAKPLKTTFIIAQGGTGQMLSLPMNEFLQQSFKEIGIDIDFKVVEL ETLYTHWRKGAADEMNAGITANNIAYVTSDPLYAIVRFFASDQIAPTGVNWGGYKNPKVDALIAEAKQTFDPAKQDELIA QAHAAVVDDAVLVWVVHDTNPHALSPKVKTFVQAQHWFQDLTTIGAE
Sequences:
>Translated_527_residues MSLLAAALALGLSAVAARAETVLRYGISMADIPLTTGQPDRGAGAYQFTGYTIYDPLVAWDMSVADKPGKLIPGLATEWK VDDADKKKWRFTLRKGVKFHDGSDFNADAVIWNLDKVLNDKAPQFDKRQSAQVKTRLPSVASYAKIDDSTVEITTKTVDS FFPYQMLWFLISSPAQYEKLGKDWDKFASQPSGTGPFKLTRLVPRELAELSRNSEYWNKDRIPKTDKLVLVPMPEALTRT NALLAGQVDLIETPAPDAVPQLKAAGMKLVDNVTPHVWNYHLSVLPGSPWTDIRLRKALNLAINRDEVVGLMNGLAKPAK GQVDPSSPWFGKPTFELKYDLAAAKKLVEEAGYSPAKPLKTTFIIAQGGTGQMLSLPMNEFLQQSFKEIGIDIDFKVVEL ETLYTHWRKGAADEMNAGITANNIAYVTSDPLYAIVRFFASDQIAPTGVNWGGYKNPKVDALIAEAKQTFDPAKQDELIA QAHAAVVDDAVLVWVVHDTNPHALSPKVKTFVQAQHWFQDLTTIGAE >Mature_526_residues SLLAAALALGLSAVAARAETVLRYGISMADIPLTTGQPDRGAGAYQFTGYTIYDPLVAWDMSVADKPGKLIPGLATEWKV DDADKKKWRFTLRKGVKFHDGSDFNADAVIWNLDKVLNDKAPQFDKRQSAQVKTRLPSVASYAKIDDSTVEITTKTVDSF FPYQMLWFLISSPAQYEKLGKDWDKFASQPSGTGPFKLTRLVPRELAELSRNSEYWNKDRIPKTDKLVLVPMPEALTRTN ALLAGQVDLIETPAPDAVPQLKAAGMKLVDNVTPHVWNYHLSVLPGSPWTDIRLRKALNLAINRDEVVGLMNGLAKPAKG QVDPSSPWFGKPTFELKYDLAAAKKLVEEAGYSPAKPLKTTFIIAQGGTGQMLSLPMNEFLQQSFKEIGIDIDFKVVELE TLYTHWRKGAADEMNAGITANNIAYVTSDPLYAIVRFFASDQIAPTGVNWGGYKNPKVDALIAEAKQTFDPAKQDELIAQ AHAAVVDDAVLVWVVHDTNPHALSPKVKTFVQAQHWFQDLTTIGAE
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=435, Percent_Identity=28.0459770114943, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1787495, Length=475, Percent_Identity=25.0526315789474, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI1789966, Length=554, Percent_Identity=25.0902527075812, Blast_Score=113, Evalue=4e-26, Organism=Escherichia coli, GI1789397, Length=466, Percent_Identity=22.9613733905579, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1789887, Length=482, Percent_Identity=25.3112033195021, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1787762, Length=473, Percent_Identity=25.369978858351, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87081878, Length=480, Percent_Identity=22.5, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1787551, Length=316, Percent_Identity=27.8481012658228, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 58132; Mature: 58001
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLAAALALGLSAVAARAETVLRYGISMADIPLTTGQPDRGAGAYQFTGYTIYDPLVAW CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCEEEECHHHHH DMSVADKPGKLIPGLATEWKVDDADKKKWRFTLRKGVKFHDGSDFNADAVIWNLDKVLND CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCCCCCCCEEEEEHHHHHCC KAPQFDKRQSAQVKTRLPSVASYAKIDDSTVEITTKTVDSFFPYQMLWFLISSPAQYEKL CCCCCCCHHHHHHHHHCCCHHHHHCCCCCEEEEEEHHHHHHCHHHHHHHHHCCCHHHHHH GKDWDKFASQPSGTGPFKLTRLVPRELAELSRNSEYWNKDRIPKTDKLVLVPMPEALTRT CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHC NALLAGQVDLIETPAPDAVPQLKAAGMKLVDNVTPHVWNYHLSVLPGSPWTDIRLRKALN CCEEECCEEEECCCCCCCHHHHHHHCHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHH LAINRDEVVGLMNGLAKPAKGQVDPSSPWFGKPTFELKYDLAAAKKLVEEAGYSPAKPLK HHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCE TTFIIAQGGTGQMLSLPMNEFLQQSFKEIGIDIDFKVVELETLYTHWRKGAADEMNAGIT EEEEEEECCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCHHHCCCEE ANNIAYVTSDPLYAIVRFFASDQIAPTGVNWGGYKNPKVDALIAEAKQTFDPAKQDELIA ECCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH QAHAAVVDDAVLVWVVHDTNPHALSPKVKTFVQAQHWFQDLTTIGAE HHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLLAAALALGLSAVAARAETVLRYGISMADIPLTTGQPDRGAGAYQFTGYTIYDPLVAW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCEEEECHHHHH DMSVADKPGKLIPGLATEWKVDDADKKKWRFTLRKGVKFHDGSDFNADAVIWNLDKVLND CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCCCCCCCEEEEEHHHHHCC KAPQFDKRQSAQVKTRLPSVASYAKIDDSTVEITTKTVDSFFPYQMLWFLISSPAQYEKL CCCCCCCHHHHHHHHHCCCHHHHHCCCCCEEEEEEHHHHHHCHHHHHHHHHCCCHHHHHH GKDWDKFASQPSGTGPFKLTRLVPRELAELSRNSEYWNKDRIPKTDKLVLVPMPEALTRT CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHC NALLAGQVDLIETPAPDAVPQLKAAGMKLVDNVTPHVWNYHLSVLPGSPWTDIRLRKALN CCEEECCEEEECCCCCCCHHHHHHHCHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHH LAINRDEVVGLMNGLAKPAKGQVDPSSPWFGKPTFELKYDLAAAKKLVEEAGYSPAKPLK HHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCE TTFIIAQGGTGQMLSLPMNEFLQQSFKEIGIDIDFKVVELETLYTHWRKGAADEMNAGIT EEEEEEECCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCHHHCCCEE ANNIAYVTSDPLYAIVRFFASDQIAPTGVNWGGYKNPKVDALIAEAKQTFDPAKQDELIA ECCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH QAHAAVVDDAVLVWVVHDTNPHALSPKVKTFVQAQHWFQDLTTIGAE HHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA