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The map label for this gene is 146338003

Identifier: 146338003

GI number: 146338003

Start: 947298

End: 947942

Strand: Direct

Name: 146338003

Synonym: BRADO0896

Alternate gene names: NA

Gene position: 947298-947942 (Clockwise)

Preceding gene: 146337994

Following gene: 146338005

Centisome position: 12.7

GC content: 68.53

Gene sequence:

>645_bases
TTGAAAAGGGCGACGAACGCCGCAGCCAAGCGCAAGACCGTGACGGTCAAGGCAAATTCGACGGGCAGCAAGGCTCGCTC
ACGGGCCGACAAAGCTGCTGAGAGGAGCGACAACCAGGACAGCAAGGGCGATAGCAGAGGCTCCTGGCACCTGGCCCGCA
GCGACGCCGAGCGGCGGCTGTCCGAGTTCGAGTTCGCGCTGGAGCGGCTGGCGCAGTCCTATTATCGCTGGAAGGCGTCC
TGCCTCGCCGCCGTCTGCGAGGTGCCGCTGACCGGCGACGACGTCGCCGTGCTCAACGTCGTGCGCATGGGCGACGAGCC
GAAGCGGCTCGCCGAGGTCGGCCAATTGCTCAACCGCGTCGACGTGCCCAACCTGCAATATGCGACGCGCAAGCTGGTGC
GCGCCGGACTGATCGAGACCGAGGGGCGCTCATCGCGCAAGGAGACGCGCTATCGCGCCACGGCGCGCGGCCGTGCCGTC
ACCGAGGACTATGCGGCGCTGCGCGCGGCGACGCTGCCGCCGATGTTCGATGCCGTGCCCGGCTGGATCGACAGTTGCGC
GGCGACGACCGCGCAGCTCGACCAGATGGCGGGGCTCTATGGCCAGGCGACGCGGGTGGCGATCACCAAGCGTCATCAGT
CGTGA

Upstream 100 bases:

>100_bases
TCTTCATTGAATTTTTAATGTAAAAATGTCGGATGTAAACAGTAGAGATTGAGCATGCGCTGCACAAGCGTTGTGCGGAG
CGGCATCGGGAGACGGGATT

Downstream 100 bases:

>100_bases
GATCGTTCAGGCGGGTCGCGTCTCCCGCCTGAATAAGACGTAGAGCGCTGGCAGCACCAGCAGGGTCAGTATCGTCGAGG
AGATGATGCCGCCGATGACG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; MarR Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulatory Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKRATNAAAKRKTVTVKANSTGSKARSRADKAAERSDNQDSKGDSRGSWHLARSDAERRLSEFEFALERLAQSYYRWKAS
CLAAVCEVPLTGDDVAVLNVVRMGDEPKRLAEVGQLLNRVDVPNLQYATRKLVRAGLIETEGRSSRKETRYRATARGRAV
TEDYAALRAATLPPMFDAVPGWIDSCAATTAQLDQMAGLYGQATRVAITKRHQS

Sequences:

>Translated_214_residues
MKRATNAAAKRKTVTVKANSTGSKARSRADKAAERSDNQDSKGDSRGSWHLARSDAERRLSEFEFALERLAQSYYRWKAS
CLAAVCEVPLTGDDVAVLNVVRMGDEPKRLAEVGQLLNRVDVPNLQYATRKLVRAGLIETEGRSSRKETRYRATARGRAV
TEDYAALRAATLPPMFDAVPGWIDSCAATTAQLDQMAGLYGQATRVAITKRHQS
>Mature_214_residues
MKRATNAAAKRKTVTVKANSTGSKARSRADKAAERSDNQDSKGDSRGSWHLARSDAERRLSEFEFALERLAQSYYRWKAS
CLAAVCEVPLTGDDVAVLNVVRMGDEPKRLAEVGQLLNRVDVPNLQYATRKLVRAGLIETEGRSSRKETRYRATARGRAV
TEDYAALRAATLPPMFDAVPGWIDSCAATTAQLDQMAGLYGQATRVAITKRHQS

Specific function: Unknown

COG id: COG5631

COG function: function code K; Predicted transcription regulator, contains HTH domain (MarR family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23561; Mature: 23561

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRATNAAAKRKTVTVKANSTGSKARSRADKAAERSDNQDSKGDSRGSWHLARSDAERRL
CCCCHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
SEFEFALERLAQSYYRWKASCLAAVCEVPLTGDDVAVLNVVRMGDEPKRLAEVGQLLNRV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHC
DVPNLQYATRKLVRAGLIETEGRSSRKETRYRATARGRAVTEDYAALRAATLPPMFDAVP
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
GWIDSCAATTAQLDQMAGLYGQATRVAITKRHQS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
>Mature Secondary Structure
MKRATNAAAKRKTVTVKANSTGSKARSRADKAAERSDNQDSKGDSRGSWHLARSDAERRL
CCCCHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
SEFEFALERLAQSYYRWKASCLAAVCEVPLTGDDVAVLNVVRMGDEPKRLAEVGQLLNRV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHC
DVPNLQYATRKLVRAGLIETEGRSSRKETRYRATARGRAVTEDYAALRAATLPPMFDAVP
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
GWIDSCAATTAQLDQMAGLYGQATRVAITKRHQS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA