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The map label for this gene is atzC [H]

Identifier: 146337970

GI number: 146337970

Start: 914548

End: 915750

Strand: Reverse

Name: atzC [H]

Synonym: BRADO0862

Alternate gene names: 146337970

Gene position: 915750-914548 (Counterclockwise)

Preceding gene: 146337971

Following gene: 146337964

Centisome position: 12.28

GC content: 66.42

Gene sequence:

>1203_bases
ATGGCCGTCGACAAGCTGTTCATCAATGCGCGCCTCGACCGGGGCGCGCGCCATGCGATCACGGTCGACCATGGCCGTAT
CAGCGGCCTGCTAGCCGAAACCGCGCGGCCCGAGGCGCGCGAGGTGATCGATCTCGGCGGCGCGCTGGTCGTGCCCGGCT
TCGTCGAAGGCCATATCCATCTCGACACCAGCTTCTATGGCGATGCCTGGAAGCCGCACAAGCCGTGCACCAACGGATTC
GACGTGCACGAGCGCGTTGCCTTCCAGGCGGAGAACATGGCCGCGGCAGCGCCGATGGACGTGCGCGCCCGCAACCAGCT
CGATCTCTGCATCGGTCACGGCACGGCGCGGATGCGAAGCCATGTGATGGTCGACGGCTCGGTCGGGCTGAAGTCGCTGG
AGACGATCCTGCGCGTGCGGGAGGAGTATCGCGACCTGATCGAGATCCAGCTCGTCGCGTTTCCCCAGAGCGGCATTATT
AAGAGCCCCGGCACGCCCGAACTGCTCGACGAGGCGATCAAGCAGGGAGCGAACGTGGTCGGCGGACTCGATCCGGCGAG
CTTCGATCGCGACGTCGAGAAGCATCTCGATGTCGTGTTCGGCGTCGCGCAGAAGCATGGCGTCGACGTCGACATCCATC
TTCATGATGGAGGCATGCTCGGCCTGTTCGAGCTGGAGCAGATCGCCTCACGCACGCGCGCACTCGGCATGCAGGGCCAT
GTCGCGGTCAGCCACGCCTACGGGCTCGGCGATCTCCCGGCAGAGCCGCTGAAGAAGATTGCCGACGTGCTGGCCGCGTC
GGGCGTCGCCATCATGACCAACGCGCCGGGTGCGCGGCCCTTCCCGCCGGTGGCTCTGCTGCGCGCGGCCGGCGTTACCG
TGTTCAGCGGCAACGACAACATCCGCGATTCCTGGTGGCCCTATGGCGACGGTGATCTGTTGAACCGGGCCATGATGGTT
GGCTATCGCTCCGGCTTCTATGTCGACGACGAGCTGCGGGCTGCCTTCGATCTCGTCACCGCCGCTGGCGCCAAGGCGCT
GCGGCTTGCCGACTATGGTCTCGAGGTCGGAGCGCACGCCGACTTCGTCACCCTCAATGCCGAGCACGTCCCGGAGGCGG
TGGCGGCCGTGCCCAAAGGACGATCCGTCTACAAAGATGGCCGCCTGATCGCGCGCGACGGCCGCGTGATGCGAACGTGC
TGA

Upstream 100 bases:

>100_bases
TCGCGGCGTGACCAGCATCTGAGCTTGCGGCTTGGATCGATCCTGATCGACAATGCATCGGGCCGCCGTTCGCGGTCCGA
TGCTGGCGTCAGGAGGATCA

Downstream 100 bases:

>100_bases
GCCGCGCTATCGCACCGGCTCGACAGACGGCTGCGACTGCGGCGGCTCGGCGCGCGATACCGTCGCGGCCGCAATCCATT
GCGTCACCGCTGCCAATTGC

Product: cytosine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MAVDKLFINARLDRGARHAITVDHGRISGLLAETARPEAREVIDLGGALVVPGFVEGHIHLDTSFYGDAWKPHKPCTNGF
DVHERVAFQAENMAAAAPMDVRARNQLDLCIGHGTARMRSHVMVDGSVGLKSLETILRVREEYRDLIEIQLVAFPQSGII
KSPGTPELLDEAIKQGANVVGGLDPASFDRDVEKHLDVVFGVAQKHGVDVDIHLHDGGMLGLFELEQIASRTRALGMQGH
VAVSHAYGLGDLPAEPLKKIADVLAASGVAIMTNAPGARPFPPVALLRAAGVTVFSGNDNIRDSWWPYGDGDLLNRAMMV
GYRSGFYVDDELRAAFDLVTAAGAKALRLADYGLEVGAHADFVTLNAEHVPEAVAAVPKGRSVYKDGRLIARDGRVMRTC

Sequences:

>Translated_400_residues
MAVDKLFINARLDRGARHAITVDHGRISGLLAETARPEAREVIDLGGALVVPGFVEGHIHLDTSFYGDAWKPHKPCTNGF
DVHERVAFQAENMAAAAPMDVRARNQLDLCIGHGTARMRSHVMVDGSVGLKSLETILRVREEYRDLIEIQLVAFPQSGII
KSPGTPELLDEAIKQGANVVGGLDPASFDRDVEKHLDVVFGVAQKHGVDVDIHLHDGGMLGLFELEQIASRTRALGMQGH
VAVSHAYGLGDLPAEPLKKIADVLAASGVAIMTNAPGARPFPPVALLRAAGVTVFSGNDNIRDSWWPYGDGDLLNRAMMV
GYRSGFYVDDELRAAFDLVTAAGAKALRLADYGLEVGAHADFVTLNAEHVPEAVAAVPKGRSVYKDGRLIARDGRVMRTC
>Mature_399_residues
AVDKLFINARLDRGARHAITVDHGRISGLLAETARPEAREVIDLGGALVVPGFVEGHIHLDTSFYGDAWKPHKPCTNGFD
VHERVAFQAENMAAAAPMDVRARNQLDLCIGHGTARMRSHVMVDGSVGLKSLETILRVREEYRDLIEIQLVAFPQSGIIK
SPGTPELLDEAIKQGANVVGGLDPASFDRDVEKHLDVVFGVAQKHGVDVDIHLHDGGMLGLFELEQIASRTRALGMQGHV
AVSHAYGLGDLPAEPLKKIADVLAASGVAIMTNAPGARPFPPVALLRAAGVTVFSGNDNIRDSWWPYGDGDLLNRAMMVG
YRSGFYVDDELRAAFDLVTAAGAKALRLADYGLEVGAHADFVTLNAEHVPEAVAAVPKGRSVYKDGRLIARDGRVMRTC

Specific function: Transforms N-isopropylammelide to cyanuric acid and isopropylamine [H]

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

Organism=Escherichia coli, GI1786517, Length=385, Percent_Identity=30.6493506493506, Blast_Score=174, Evalue=6e-45,
Organism=Escherichia coli, GI1786531, Length=407, Percent_Identity=29.2383292383292, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.99.4 [H]

Molecular weight: Translated: 43053; Mature: 42921

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDKLFINARLDRGARHAITVDHGRISGLLAETARPEAREVIDLGGALVVPGFVEGHIH
CCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCCCEEECCEEECEEE
LDTSFYGDAWKPHKPCTNGFDVHERVAFQAENMAAAAPMDVRARNQLDLCIGHGTARMRS
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHC
HVMVDGSVGLKSLETILRVREEYRDLIEIQLVAFPQSGIIKSPGTPELLDEAIKQGANVV
EEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEE
GGLDPASFDRDVEKHLDVVFGVAQKHGVDVDIHLHDGGMLGLFELEQIASRTRALGMQGH
CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCC
VAVSHAYGLGDLPAEPLKKIADVLAASGVAIMTNAPGARPFPPVALLRAAGVTVFSGNDN
EEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCCEEEECCCCC
IRDSWWPYGDGDLLNRAMMVGYRSGFYVDDELRAAFDLVTAAGAKALRLADYGLEVGAHA
CCCCCCCCCCHHHHHHHHHHEECCCCEECHHHHHHHHHHHHCCCHHEEEECCCCEECCCC
DFVTLNAEHVPEAVAAVPKGRSVYKDGRLIARDGRVMRTC
CEEEECHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCC
>Mature Secondary Structure 
AVDKLFINARLDRGARHAITVDHGRISGLLAETARPEAREVIDLGGALVVPGFVEGHIH
CCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCCCEEECCEEECEEE
LDTSFYGDAWKPHKPCTNGFDVHERVAFQAENMAAAAPMDVRARNQLDLCIGHGTARMRS
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHC
HVMVDGSVGLKSLETILRVREEYRDLIEIQLVAFPQSGIIKSPGTPELLDEAIKQGANVV
EEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEE
GGLDPASFDRDVEKHLDVVFGVAQKHGVDVDIHLHDGGMLGLFELEQIASRTRALGMQGH
CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCC
VAVSHAYGLGDLPAEPLKKIADVLAASGVAIMTNAPGARPFPPVALLRAAGVTVFSGNDN
EEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCCEEEECCCCC
IRDSWWPYGDGDLLNRAMMVGYRSGFYVDDELRAAFDLVTAAGAKALRLADYGLEVGAHA
CCCCCCCCCCHHHHHHHHHHEECCCCEECHHHHHHHHHHHHCCCHHEEEECCCCEECCCC
DFVTLNAEHVPEAVAAVPKGRSVYKDGRLIARDGRVMRTC
CEEEECHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9422605 [H]