| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337964
Identifier: 146337964
GI number: 146337964
Start: 908819
End: 909169
Strand: Reverse
Name: 146337964
Synonym: BRADO0856
Alternate gene names: NA
Gene position: 909169-908819 (Counterclockwise)
Preceding gene: 146337970
Following gene: 146337963
Centisome position: 12.19
GC content: 66.67
Gene sequence:
>351_bases ATGCTCGGCCTGTTCTGGCTCGCGGGCGAGGCGTTGGCCCGGACCACTGGCCTGCCCTTGCCCGGCGGAATTCTCGGCAT GGCGCTGGCGCTCGCGCTGTTTCTGGCGGGAGGGCTCAAGGTCGCCAGCATGAAGCGTGGCGCCAACTGGATGCTGGCCG AGATGCTGCTGTTCTTTGTCCCGGCGGTGCTGGCGCTGCTCGATCATCGCGAGCTGTTCGGGCTGCTGGGCCTGAAGATC TTCGCCATCATCGTCGTGAGCACCACCGCCGTGATGTGCGTGACGGCGCTGACCGTCGACCTCTGCTACCGCTGGACCGA CCGTCATGACTCTCGTGGCGCTGTGGCGTGA
Upstream 100 bases:
>100_bases TTGCGCACTTAGAGGTTCTTGGACACCGCTTATGACGCAACGCAGCATTTCCATTCACGCTCAACGTCTCCTCCGCCGCA ACCGGCTGGTACAGATCGGC
Downstream 100 bases:
>100_bases GCCGCTGGTCCAGGCTGCTGTCTGGTCGCTGGCGACGATTCTGCTCTATCTGCTTGCCAAGCGCGTCCACCGGCGCTGGC CGCGCTGGTGGCTGATGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Holin-Like Protein; Murein Hydrolase Exporter LrgA Family Protein
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLGLFWLAGEALARTTGLPLPGGILGMALALALFLAGGLKVASMKRGANWMLAEMLLFFVPAVLALLDHRELFGLLGLKI FAIIVVSTTAVMCVTALTVDLCYRWTDRHDSRGAVA
Sequences:
>Translated_116_residues MLGLFWLAGEALARTTGLPLPGGILGMALALALFLAGGLKVASMKRGANWMLAEMLLFFVPAVLALLDHRELFGLLGLKI FAIIVVSTTAVMCVTALTVDLCYRWTDRHDSRGAVA >Mature_116_residues MLGLFWLAGEALARTTGLPLPGGILGMALALALFLAGGLKVASMKRGANWMLAEMLLFFVPAVLALLDHRELFGLLGLKI FAIIVVSTTAVMCVTALTVDLCYRWTDRHDSRGAVA
Specific function: Unknown
COG id: COG1380
COG function: function code R; Putative effector of murein hydrolase LrgA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12388; Mature: 12388
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLFWLAGEALARTTGLPLPGGILGMALALALFLAGGLKVASMKRGANWMLAEMLLFFV CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHH PAVLALLDHRELFGLLGLKIFAIIVVSTTAVMCVTALTVDLCYRWTDRHDSRGAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLGLFWLAGEALARTTGLPLPGGILGMALALALFLAGGLKVASMKRGANWMLAEMLLFFV CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHH PAVLALLDHRELFGLLGLKIFAIIVVSTTAVMCVTALTVDLCYRWTDRHDSRGAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA