| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337967
Identifier: 146337967
GI number: 146337967
Start: 910668
End: 911495
Strand: Direct
Name: 146337967
Synonym: BRADO0859
Alternate gene names: NA
Gene position: 910668-911495 (Clockwise)
Preceding gene: 146337966
Following gene: 146337968
Centisome position: 12.21
GC content: 64.13
Gene sequence:
>828_bases ATGTGTCGTTGGATCGCCTACCGCGGAGAGCGGACCTCGTTCGAGCACTACGTGACCGAGCCCGAGCATTCCCTGGTGAC GCAGAGCATCCGCGCGCTGGAATCGACAGCGGGCACGAATGGCGATGGCTTTGGCCTCGGCTGGTATGGCGACCATCCCG AGCCAGGCCTCTATCGCGAGACGCGTCCGGCCTGGTCGGACGAGAACCTGCGCTATCTCTGCCGCCATCTGCACTCACAT CTGTTCTTCGCGCATGTCCGTGCGGCGACCGGCACGGCGGTGACGCGGCAGAACTGCCATCCGTTCGCCTGCGGCCGCTG GCTGTTCATGCATAATGGCTTCGTCGGAAGCTGGAACAGGCTGCGCCGAAAAGTGGAGGCCATGATTCCGGATGCGCTGT ATCCGTCCCGGCTCGGCACGACGGACTCCGAGGCGGTGTTTCTCGCCATGGTCGGCGCCGGCATCGATCAGGATCCGATC GGCGCGACATCGAGGGTGATCAGGGCTCTCTGTCAGCTCGTCAATGAGGATGGCCTACGCGAGCATCTGCGCTTCACCTC GGCGCTGTCGAATGGCCACGATCTCTACGCGTTTCGCTTCGCCGCTAACGACCGCGCCAACTCGCTCTACTACCGCGAGG ACGGCGACCAGGTGATCGCCGTCTCCGAGCCCTACGACAAGGAGCCGGATTGGATCGAGGTCCCGCCGGATCACGTGCTG GTCGCACGTGCGTCCAGCCGCGCCGAGATCGTTCCGCTCTTTGTCGCAGGCGCGATCGAGCTCGAGGCGGAACGCAAGAG ATCACAGAGGGTTATCGGAGGCATGTAG
Upstream 100 bases:
>100_bases GAACGGGAACCCGCGAGCGCCTTACGCGTTTCCGCCTCCCTCGCCAAGTGCGCCGCGATGACGCGCATCTTGAGTCCACT CATTCATCCGGAGGGGCAGG
Downstream 100 bases:
>100_bases AAGAACGGAGTGGGATGTTCCGCGATGTGCGGCATTTGTGGTGAAATCAGGCATTCCGGCCAGCCCGCGCTCGCGGCGCT CAGCCTGGTCAACGATGCGA
Product: putative glutamine amidotransferase, class-II
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MCRWIAYRGERTSFEHYVTEPEHSLVTQSIRALESTAGTNGDGFGLGWYGDHPEPGLYRETRPAWSDENLRYLCRHLHSH LFFAHVRAATGTAVTRQNCHPFACGRWLFMHNGFVGSWNRLRRKVEAMIPDALYPSRLGTTDSEAVFLAMVGAGIDQDPI GATSRVIRALCQLVNEDGLREHLRFTSALSNGHDLYAFRFAANDRANSLYYREDGDQVIAVSEPYDKEPDWIEVPPDHVL VARASSRAEIVPLFVAGAIELEAERKRSQRVIGGM
Sequences:
>Translated_275_residues MCRWIAYRGERTSFEHYVTEPEHSLVTQSIRALESTAGTNGDGFGLGWYGDHPEPGLYRETRPAWSDENLRYLCRHLHSH LFFAHVRAATGTAVTRQNCHPFACGRWLFMHNGFVGSWNRLRRKVEAMIPDALYPSRLGTTDSEAVFLAMVGAGIDQDPI GATSRVIRALCQLVNEDGLREHLRFTSALSNGHDLYAFRFAANDRANSLYYREDGDQVIAVSEPYDKEPDWIEVPPDHVL VARASSRAEIVPLFVAGAIELEAERKRSQRVIGGM >Mature_275_residues MCRWIAYRGERTSFEHYVTEPEHSLVTQSIRALESTAGTNGDGFGLGWYGDHPEPGLYRETRPAWSDENLRYLCRHLHSH LFFAHVRAATGTAVTRQNCHPFACGRWLFMHNGFVGSWNRLRRKVEAMIPDALYPSRLGTTDSEAVFLAMVGAGIDQDPI GATSRVIRALCQLVNEDGLREHLRFTSALSNGHDLYAFRFAANDRANSLYYREDGDQVIAVSEPYDKEPDWIEVPPDHVL VARASSRAEIVPLFVAGAIELEAERKRSQRVIGGM
Specific function: Unknown
COG id: COG0121
COG function: function code R; Predicted glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324138, Length=296, Percent_Identity=28.0405405405405, Blast_Score=109, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017808 - InterPro: IPR017932 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30991; Mature: 30991
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRWIAYRGERTSFEHYVTEPEHSLVTQSIRALESTAGTNGDGFGLGWYGDHPEPGLYRE CCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCC TRPAWSDENLRYLCRHLHSHLFFAHVRAATGTAVTRQNCHPFACGRWLFMHNGFVGSWNR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHCEEEEEECCCCCCHHH LRRKVEAMIPDALYPSRLGTTDSEAVFLAMVGAGIDQDPIGATSRVIRALCQLVNEDGLR HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHH EHLRFTSALSNGHDLYAFRFAANDRANSLYYREDGDQVIAVSEPYDKEPDWIEVPPDHVL HHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCEEECCCCCEE VARASSRAEIVPLFVAGAIELEAERKRSQRVIGGM EEECCCCCEEEEEEEECEEEEHHHHHHHHHHCCCC >Mature Secondary Structure MCRWIAYRGERTSFEHYVTEPEHSLVTQSIRALESTAGTNGDGFGLGWYGDHPEPGLYRE CCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCC TRPAWSDENLRYLCRHLHSHLFFAHVRAATGTAVTRQNCHPFACGRWLFMHNGFVGSWNR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHCEEEEEECCCCCCHHH LRRKVEAMIPDALYPSRLGTTDSEAVFLAMVGAGIDQDPIGATSRVIRALCQLVNEDGLR HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHH EHLRFTSALSNGHDLYAFRFAANDRANSLYYREDGDQVIAVSEPYDKEPDWIEVPPDHVL HHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCEEECCCCCEE VARASSRAEIVPLFVAGAIELEAERKRSQRVIGGM EEECCCCCEEEEEEEECEEEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]