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The map label for this gene is 146337220

Identifier: 146337220

GI number: 146337220

Start: 52589

End: 53011

Strand: Direct

Name: 146337220

Synonym: BRADO0046

Alternate gene names: NA

Gene position: 52589-53011 (Clockwise)

Preceding gene: 146337219

Following gene: 146337221

Centisome position: 0.71

GC content: 59.81

Gene sequence:

>423_bases
ATGTCGACGAAAGCGCCCAACCCTGTTGACAAGCATGTCGGCAGCCGGGTGCGGATGCGCCGTATCATGCTGGGAATGAG
CCAGGAAAAACTTGGTGAGGCTCTCGGACTCACGTTCCAGCAGATACAGAAGTACGAAAAAGGCACCAATCGAGTCGGCG
CCAGCCGGATCCAGCAGATCTCTGAAGTTCTGCAGGTCCCTGTCTCGTTCCTGTTCGAAGGCGTCCCGAGTGGTGGGACC
AATGGTGAGGCTTTCGGCGAGGGCGCCTCTCCGGCCTATGTATCTGATTTTCTGGCAACCTCCGAAGGGCTGGCGTTGAC
CCGCGCGTTTACGCGGATCCACGACTCGAAGCTTCGCCGCAGCATCGTCGACCTGGTCGAGCAGATTGCTGATCGCGAGG
CGCCGGAAGAGGGTGAGGGCTGA

Upstream 100 bases:

>100_bases
CGTCCATCGTTAGTACGACATGAGAGCAGAAATTGACGGTGTGAGCGCCTGAGGCATACTGCGACCGCCTCGTTACGAGG
CCATACTGAGGAGTTGAGAG

Downstream 100 bases:

>100_bases
GCCACGCTGATGCGCTGGCGCTGACATTCCTATCGCGGCCGTGCCTCATATGACGTCTCTCATATGAATGTCAGCGCCCA
CGGGGGGCCATGAGCGAGCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSTKAPNPVDKHVGSRVRMRRIMLGMSQEKLGEALGLTFQQIQKYEKGTNRVGASRIQQISEVLQVPVSFLFEGVPSGGT
NGEAFGEGASPAYVSDFLATSEGLALTRAFTRIHDSKLRRSIVDLVEQIADREAPEEGEG

Sequences:

>Translated_140_residues
MSTKAPNPVDKHVGSRVRMRRIMLGMSQEKLGEALGLTFQQIQKYEKGTNRVGASRIQQISEVLQVPVSFLFEGVPSGGT
NGEAFGEGASPAYVSDFLATSEGLALTRAFTRIHDSKLRRSIVDLVEQIADREAPEEGEG
>Mature_139_residues
STKAPNPVDKHVGSRVRMRRIMLGMSQEKLGEALGLTFQQIQKYEKGTNRVGASRIQQISEVLQVPVSFLFEGVPSGGTN
GEAFGEGASPAYVSDFLATSEGLALTRAFTRIHDSKLRRSIVDLVEQIADREAPEEGEG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15235; Mature: 15104

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKAPNPVDKHVGSRVRMRRIMLGMSQEKLGEALGLTFQQIQKYEKGTNRVGASRIQQI
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SEVLQVPVSFLFEGVPSGGTNGEAFGEGASPAYVSDFLATSEGLALTRAFTRIHDSKLRR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SIVDLVEQIADREAPEEGEG
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STKAPNPVDKHVGSRVRMRRIMLGMSQEKLGEALGLTFQQIQKYEKGTNRVGASRIQQI
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SEVLQVPVSFLFEGVPSGGTNGEAFGEGASPAYVSDFLATSEGLALTRAFTRIHDSKLRR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SIVDLVEQIADREAPEEGEG
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]